Faculty Profiles - ASANUMA, Hiroyuki

Papers - ASANUMA, Hiroyuki

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Intrastrand backbone-nucleobase interactions stabilize unwound right-handed helical structures of heteroduplexes of L-aTNA/RNA and SNA/RNA Reviewed

Vol. 3 ( 1 ) page： 156 2020.12

Investigation of Strand-Selective Interaction of SNA-Modified siRNA with AGO2-MID Reviewed

Kamiya Yukiko, Takeyama Yuuki, Mizuno Tomonari, Satoh Fuminori, Asanuma Hiroyuki

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES Vol. 21 ( 15 ) page： 1 - 13 2020.8

Photo-regulated trajectories of gliding microtubules conjugated with DNA Reviewed

Akter Mousumi, Keya Jakia Jannat, Kabir Arif Md Rashedul, Asanuma Hiroyuki, Murayama Keiji, Sada Kazuki, Kakugo Akira

CHEMICAL COMMUNICATIONS Vol. 56 ( 57 ) page： 7953 - 7956 2020.7

Efficient Light-Harvesting Antennae Resulting from the Dense Organization of Dyes into DNA Junctions though d-Threoninol Reviewed

Kashida Hiromu, Azuma Hidenori, Maruyama Ryoko, Araki Yasuyuki, Wada Takehiko, Asanuma Hiroyuki

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION Vol. 59 ( 28 ) page： 11360 - 11363 2020.7

A triplex-forming linear probe for sequence-specific detection of duplex DNA with high sensitivity and affinity Reviewed

Chen Yanglingzhi, Murayama Keiji, Kashida Hiromu, Kamiya Yukiko, Asanuma Hiroyuki

CHEMICAL COMMUNICATIONS Vol. 56 ( 40 ) page： 5358 - 5361 2020.5

Incorporation of Pseudo-complementary Bases 2,6-Diaminopurine and 2-Thiouracil into Serinol Nucleic Acid (SNA) to Promote SNA/RNA Hybridization Reviewed

Kamiya Yukiko, Sato Fuminori, Murayama Keiji, Kodama Atsuji, Uchiyama Susumu, Asanuma Hiroyuki

CHEMISTRY-AN ASIAN JOURNAL Vol. 15 ( 8 ) page： 1266 - 1271 2020.4

A Quencher-Free Linear Probe from Serinol Nucleic Acid with a Fluorescent Uracil Analogue Reviewed

Murayama Keiji, Asanuma Hiroyuki

CHEMBIOCHEM Vol. 21 ( 1-2 ) page： 120 - 128 2020.1

8-Pyrenylvinyl Adenine Controls Reversible Duplex Formation between Serinol Nucleic Acid and RNA by [2+2] Photocycloaddition Reviewed

Murayama Keiji, Yamano Yuuhei, Asanuma Hiroyuki

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY Vol. 141 ( 24 ) page： 9485 - 9489 2019.6

cis-On/trans-Off of DNA Hybridization with Alkylthio-azobenzene on L-Threoninol Responding to Visible Light Invited Reviewed International coauthorship

Asanuma Hiroyuki, Ishikawa Teruchika, Yamano Yuuhei, Murayama Keiji, Liang Xingguo

CHEMPHOTOCHEM Vol. 3 ( 6 ) page： 418 - 424 2019.6

Orthogonally Photocontrolled Non-Autonomous DNA Walker Reviewed International coauthorship

Skugor Marko, Valero Julian, Murayama Keiji, Centola Mathias, Asanuma Hiroyuki, Famulok Michael

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION Vol. 58 ( 21 ) page： 6948 - 6951 2019.5

Isothermal double-cycle catalytic system using DNAzyme and RNase H for the highly selective one-pot detection of oligonucleotides Reviewed International coauthorship

An Ran, Kawai Hayato, Asanuma Hiroyuki, Komiyama Makoto, Liang Xingguo

ANALYST Vol. 144 ( 8 ) page： 2773 - 2779 2019.4

N-Benzoyl-protected Peptide Nucleic Acid (PNA) Monomers Expand the Range of Nucleobases Available for PNA-DNA Chimera

Inagaki Masahito, Uematsu Ryohei, Mizutani Tatsuya, Unabara Daisuke, Araki Yasuyuki, Sakamoto Seiji, Kashida Hiromu, Nishijima Masaki, Asanuma Hiroyuki, Inoue Yoshihisa, Wada Takehiko

Chemistry Letters Vol. 48 ( 4 ) page： 341 - 344 2019.4

Language：English Publishing type：Research paper (scientific journal) Publisher：The Chemical Society of Japan

We synthesized N-benzoyl-protected peptide nucleic acid (PNA) monomers, which are robust under the conditions for deprotecting the 9-fluorenylmethoxycarbonyl (Fmoc) group by piperidine but are removable by aqueous ammonia and hence totally compatible with Fmoc-solid phase synthesis. This new invention expands the range of available nucleobase sequences, allowing us to use acid-sensitive PNA oligomers and purine nucleotides (both of which are difficult to use in the conventional methods) in the preparation of PNA-DNA chimeras to avoid the drawbacks of traditional PNAs.

DOI： 10.1246/cl.181048

Web of Science

Scopus

CiNii Research

In-stem molecular beacon targeted to a 5 '-region of tRNA inclusive of the D arm that detects mature tRNA with high sensitivity Reviewed

Miyoshi Yuichi, Ohtsuki Takashi, Kashida Hiromu, Asanuma Hiroyuki, Watanabe Kazunori

PLOS ONE Vol. 14 ( 1 ) page： e0211505 2019.1

Photo-regulatable DNA isothermal amplification by template-mediated ligation Reviewed

Cheng Bohao, Kashida Hiromu, Shimada Naohiko, Maruyama Atsushi, Asanuma Hiroyuki

CHEMICAL COMMUNICATIONS Vol. 55 ( 8 ) page： 1080 - 1083 2019

Selective binding of nucleosides to gapped DNA duplex revealed by orientation and distance dependence of FRET Reviewed

Kashida Hiromu, Kokubo Yuta, Makino Koki, Asanuma Hiroyuki

ORGANIC & BIOMOLECULAR CHEMISTRY Vol. 17 ( 28 ) page： 6786 - 6789 2019

The DNA Duplex as an Aqueous One-Dimensional Soft Crystal Scaffold for Photochemistry Invited

Asanuma Hiroyuki, Murayama Keiji, Kamiya Yukiko, Kashida Hiromu

Bulletin of the Chemical Society of Japan Vol. 91 ( 12 ) page： 1739 - 1748 2018.12

Language：English Publishing type：Research paper (scientific journal) Publisher：The Chemical Society of Japan

In this account, we demonstrate that DNA duplex is an ideal scaffold for photochemistry, particularly for comparison of photochemical theory with experiments. The well-defined structure of a DNA duplex can be regarded as an aqueous one-dimensional soft crystal composed of a chromophore-like base-pair assembly. When any base pair in the duplex is replaced with a chromophore, orientation, distance, and association number of chromophores can be precisely controlled. We have developed a new methodology for introduction of chromophores into DNA duplexes using d-threoninol. By using the DNA duplex as a scaffold, experiments on exciton interactions of chromophore assemblies can be compared with molecular exciton theory. A fluorescent resonance energy transfer (FRET) system was also constructed by introducing donor pyrene and acceptor perylene into the DNA duplex using d-threoninol monomers. Using this system, we demonstrated orientation-dependent FRET. We found that theories on both exciton interaction and FRET qualitatively coincide with experimental data and revealed the limitation of the point-dipole approximation. We also evaluated the intrinsic quantum yield of photodimerization of stilbene derivatives by suppressing a side reaction. We propose that there is a correlation of quantum yield of photodimerization with the energy gap of HOMO or LUMO, a hypothesis that deserves theoretical investigation.

DOI： 10.1246/bcsj.20180278

Web of Science

Scopus

CiNii Research

Quantitative evaluation of energy migration between identical chromophores enabled by breaking symmetry Reviewed

Kashida Hiromu, Kawai Hayato, Maruyama Ryoko, Kokubo Yuta, Araki Yasuyuki, Wada Takehiko, Asanuma Hiroyuki

COMMUNICATIONS CHEMISTRY Vol. 1 ( 1 ) 2018.12

Bifacial Nucleobases for Hexaplex Formation in Aqueous Solution Reviewed

Kashida Hiromu, Hattori Yuhei, Tazoe Kaho, Inoue Tadashi, Nishikawa Keiji, Ishii Kentaro, Uchiyama Susumu, Yamashita Hayato, Abe Masayuki, Kamiya Yukiko, Asanuma Hiroyuki

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY Vol. 140 ( 27 ) page： 8456 - 8462 2018.7

DNA-assisted swarm control in a biomolecular motor system Reviewed

Keya Jakia Jannat, Suzuki Ryuhei, Kabir Arif Md. Rashedul, Inoue Daisuke, Asanuma Hiroyuki, Sada Kazuki, Hess Henry, Kuzuya Akinori, Kakugo Akira

NATURE COMMUNICATIONS Vol. 9 page： 453 2018.1

増大特集細胞多様性解明に資する光技術─見て,動かす Ⅱ.見えなかったものを視る生細胞内RNAイメージングのための人工核酸

樫田啓, 浅沼浩之

生体の科学 Vol. 68 ( 5 ) page： 440 - 441 2017.10

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Papers - ASANUMA, Hiroyuki