-
Image-based hybrid model incorporating initial spatial distribution for mesenchymal stem cell cultivation process design
Hirono, K; Hayashi, Y; Udugama, IA; Takemoto, Y; Kato, R; Kino-oka, M; Sugiyama, H
AICHE JOURNAL
2024.4
-
Prediction of antibody production performance change in Chinese hamster ovary cells using morphological profiling.
Reviewed
Hisada T, Imai Y, Takemoto Y, Kanie K, Kato R
Journal of bioscience and bioengineering
2024.3
-
Development of novel waxy bone haemostatic agents composed of biodegradable polymers with osteogenic-enhancing peptides in rabbit models
Reviewed
Ohno, T; Suenaga, H; Yamawaki-Ogata, A; Kanie, K; Kato, R; Uto, K; Ebara, M; Ito, H; Narita, Y; Usui, A; Mutsuga, M
Interdisciplinary cardiovascular and thoracic surgery
Vol.
37
(
5
)
2023.11
-
The structurally diverse phytocannabinoids cannabichromene, cannabigerol and cannabinol significantly inhibit amyloid β-evoked neurotoxicity and changes in cell morphology in PC12 cells.
Reviewed
International coauthorship
Marsh DT, Sugiyama A, Imai Y, Kato R, Smid SD
Basic & clinical pharmacology & toxicology
2023.9
-
Automated cell isolation from photodegradable hydrogel based on fluorescence image analysis.
Reviewed
Shinji Sugiura, Shinya Yamahira, Masato Tamura, Kazumi Shin, Mayu Shibuta, Taku Satoh, Yui Matsuzawa, Gen Fujii, Fumiki Yanagawa, Michihiro Mutoh, Masumi Yanagisawa, Ryuji Kato, Hirofumi Matsui
BIOTECHNOLOGY AND BIOENGINEERING
2023.3
-
Novel functional peptide for next-generation vital pulp therapy
Reviewed
Watanabe Masakatsu, Okamoto Motoki, Komichi Shun, Huang Hailing, Matsumoto Sayoko, Moriyama Kiichi, Ohshima Jun, Abe Shotaro, Morita Masayoshi, Ali Manahil,, Takebe Katsuki, Kozaki Ikko, Fujimoto Akiyo, Kanie Kei, Kato Ryuji, Uto Kenichiro, Ebara Mitsuhiro, Yamawaki-Ogata Aika, Narita Yuji, Takahashi Yusuke, Hayashi Mikako
JOURNAL OF DENTAL RESEARCH
Vol.
102
(
3
)
page：
322
-
330
2023.3
-
Bioinformatics in bioscience and bioengineering: Recent advances, applications, and perspectives
Reviewed
Uesaka Kazuma, Oka Hiroya, Kato Ryuji, Kanie Kei, Kojima Takaaki, Tsugawa Hiroshi, Toda Yosuke, Horinouchi Takaaki
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
134
(
5
)
page：
363
-
373
2022.11
-
特集 小児外科を取り巻く最新テクノロジー Hirschsprung病に対する機械学習を用いた病理診断支援システムの開発
Reviewed
天野 日出, 木村 和恵, 今井 佑太, 加藤 竜司, 中澤 温子, 城田 千代栄, 滝本 愛太朗, 住田 亙, 牧田 智, 岡本 眞宗, 安井 昭洋, 高田 瞬也, 中川 洋一, 加藤 大幾, 檜 顕成, 内田 広夫
小児外科
Vol.
54
(
10
)
page：
1007
-
1011
2022.10
-
Morphology-based noninvasive early prediction of serial-passage potency enhances the selection of clone-derived high-potency cell bank from mesenchymal stem cells
Reviewed
Suyama Takashi, Takemoto Yuto, Miyauchi Hiromi, Kato Yuko, Matsuzaki Yumi, Kato Ryuji
INFLAMMATION AND REGENERATION
Vol.
42
(
1
)
page：
30
2022.10
-
Label-free morphological sub-population cytometry for sensitive phenotypic screening of heterogenous neural disease model cells
Reviewed
Imai Yuta, Iida Madoka, Kanie Kei, Katsuno Masahisa, Kato Ryuji
SCIENTIFIC REPORTS
Vol.
12
(
1
)
page：
9296
2022.6
-
Bi-layered carboxymethyl cellulose-collagen vitrigel dual-surface adhesion-prevention membrane
Reviewed
Wang Yue, Kanie Kei, Takezawa Toshiaki, Horikawa Miki, Kaneko Kyoshiro, Sugimoto Ayako, Yamawaki-Ogata Aika, Narita Yuji, Kato Ryuji
CARBOHYDRATE POLYMERS
Vol.
285
page：
119223
2022.6
-
Myc supports self-renewal of basal cells in the esophageal epithelium.
Reviewed
International coauthorship
Tomoaki Hishida, Eric Vazquez-Ferrer, Yuriko Hishida-Nozaki, Yuto Takemoto, Fumiyuki Hatanaka, Kei Yoshida, Javier Prieto, Sanjeeb Kumar Sahu, Yuta Takahashi, Pradeep Reddy, David D O'Keefe, Concepcion Rodriguez Esteban, Paul S Knoepfler, Estrella Nuñez Delicado, Antoni Castells, Josep M Campistol, Ryuji Kato, Hiroshi Nakagawa, Juan Carlos Izpisua Belmonte
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
Vol.
10
page：
786031
2022.3
-
Collection of Data Variation Using a High-Throughput Image-Based Assay Platform Facilitates Data-Driven Understanding of TRPA1 Agonist Diversity
Reviewed
Terada Yuko, Tanaka Kenjiro, Matsuyama Minami, Fujitani Masaya, Shibuya Masatoshi, Yamamoto Yoshihiko, Kato Ryuji, Ito Keisuke
APPLIED SCIENCES
Vol.
12
(
3
)
2022.2
-
Morphological heterogeneity description enabled early and parallel non-invasive prediction of T-cell proliferation inhibitory potency and growth rate for facilitating donor selection of human mesenchymal stem cells
Reviewed
Imai Yuta, Kanie Kei, Kato Ryuji
INFLAMMATION AND REGENERATION
Vol.
42
(
1
)
page：
8
2022.1
-
Enhancement of protein thermostability by three consecutive mutations using loop-walking method and machine learning
Reviewed
Yoshida Kazunori, Kawai Shun, Fujitani Masaya, Koikeda Satoshi, Kato Ryuji, Ema Tadashi
SCIENTIFIC REPORTS
Vol.
11
(
1
)
page：
11883
2021.6
-
Predicting quality decay in continuously passaged mesenchymal stem cells by detecting morphological anomalies.
Reviewed
Takemoto Yuto, Imai Yuta, Kanie Kei, Kato Ryuji
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
131
(
2
)
page：
198
-
206
2021.2
-
Development of Carbon Concentration Prediction Technology from Microstructure Images of Carburizing Heat Treatment Products using Machine Learning
Reviewed
YACHI Yoshiki, HATTORI Kiyoyuki, KATO Ryuji
NETSUSHORI
Vol.
61
(
5
)
page：
257
-
263
2021
-
身近となった画像解析とAI
加藤 竜司
生物工学会誌
Vol.
99
(
8
)
page：
432
-
435
2021
-
Screening of FFAR1-activating peptides by molecular structural analysis
Reviewed
Yoshioka Keitaro, Yamashita Haruki, Fujitani Masaya, Kato Ryuji, Shimizu Kazunori, Honda Hiroyuki
KAGAKU KOGAKU RONBUNSHU
Vol.
47
(
3
)
page：
64
-
68
2021
-
Machine learning-based amino-acid substitution of short peptides: Acquisition of peptides with enhanced inhibitory activities against α-amylase and α-glucosidase.
Reviewed
Yamashita Haruki, Fujitani Masaya, Shimizu Kazunori, Kanie Kei, Kato Ryuji, Honda Hiroyuki
ACS BIOMATERIALS SCIENCE & ENGINEERING
Vol.
6
(
11
)
page：
6117
-
6125
2020.11
-
In vitro model of human skeletal muscle tissues with contractility fabricated by immortalized human myogenic cells.
Reviewed
Nagashima Takunori, Hadiwidjaja Stacy, Ohsumi Saki, Murata Akari, Hisada Takumi, Kato Ryuji, Okada Yohei, Honda Hiroyuki, Shimizu Kazunori
ADVANCED BIOSYSTEMS
Vol.
4
(
11
)
page：
e2000121
2020.11
-
Reproducible production and image-based quality evaluation of retinalpigment epithelium sheets from human induced pluripotent stem cells.
Reviewed
Ye Ke, Takemoto Yuto, Ito Arisa, Onda Masanari, Morimoto Nao, Mandai Michiko, Takahashi Masayo, Kato Ryuji, Osakada Fumitaka
SCIENTIFIC REPORTS
Vol.
10
(
1
)
page：
14387
2020.9
-
The importance of scoring recognition fitness in spheroid morphological analysis for robust label -free quality evaluation
Reviewed
Shirai Kazuhide, Kato Hirohito, Imai Yuta, Shibuta Mayu, Kanie Kei, Kato Ryuji
REGENERATIVE THERAPY
Vol.
14
page：
205
-
214
2020.6
-
Performance of a biodegradable compositewith hydroxyapatite as a scaffold in pulp tissue repair.
Reviewed
Okamoto Motoki, Matsumoto Sayako, Sugiyama Ayato, Kanie Kei, Watanabe Masakatsu, Huang Hailing, Ali Manahil, Ito Yuki, Miura Jiro, Hirose Yujiro, Uto Koichiro, Ebara Mitsuhiro, Kato Ryuji, Yamawaki-Ogata Aika, Narita Yuji, Kawabata Shigetada, Takahashi Yusuke, Hayashi Mikako
POLYMERS (BASEL)
Vol.
12
(
4
)
page：
937
-
941
2020.4
-
Novel cannabis flavonoid, cannflavin A displays both a hormetic and neuroprotective profile against amyloid β-mediatedneurotoxicity in PC12 cells: Comparison with geranylated flavonoids, mimuloneand diplacone.
Reviewed
International coauthorship
Eggers Carly, Fujitani Masaya, Kato Ryuji, Smid Scott
BIOCHEMICAL PHARMACOLOGY
Vol.
169
page：
113609
2019.8
-
Effect of mechanical vibration stress in cell culture on human inducedpluripotent stem cells.
Reviewed
Kanie Kei, Sakai Teppei, Imai Yuta, Yoshida Kei, Sugimoto Ayako, Makino Hodaka, Kubo Hirotsugu, Kato Ryuji
REGENERATIVE THERAPY
Vol.
12
page：
27
-
35
2019.6
-
Quantitative analysisof operators' flow line in the cell culture for controlled manual operation.
Reviewed
Kanie Kei, Sasaki Hiroto, Ikeda Yurika, Tamada Masaki, Togawa Fumio, Kato Ryuji
REGENERATIVE THERAPY
Vol.
12
page：
43
-
54
2019.5
-
Identification of an early cell fate regulator bydetecting dynamics in transcriptional heterogeneity and co-regulation duringastrocyte differentiation.
Reviewed
Ando Tatsuya, Kato Ryuji, Honda Hiroyuki
NPJ SYSTEMS BIOLOGY AND APPLICATIONS
Vol.
5
(
1
)
page：
18
2019.5
-
Numerical investigation of particle dispersion in the preprocessing stage for a staticcell cultivation.
Reviewed
Sekimoto Atsushi, Kanemaru Yoshiki, Okano Yasunori, Kanie Kei, Kato Ryuji, Kino-oka Masahiro
REGENERATIVE THERAPY
Vol.
12
(
83
)
page：
87
2019.4
-
Activation of cancer-related and mitogen-activated protein kinase signaling pathways in human mature osteoblasts isolated from patients with type 2 diabetes.
Reviewed
Kuroiwa Tomoyuki, Matsumoto Megumi, Kato Ryuji, Nimura Akimoto, Yoshii Toshitaka, Okawa Atsushi, Fujita Koji
BONE REPORTS
Vol.
10
page：
100199
2019.2
-
Time-course colony tracking analysis for evaluating induced pluripotent stem cellculture processes.
Reviewed
Yoshida Kei, Okada Mai, Nagasaka Risako, Sasaki Hiroto, Kanie Kei, Kato Ryuji
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
128
(
2
)
page：
209
-
217
2019.2
-
Morphology-based analysis of myoblasts for prediction of myotube formation.
Reviewed
Ishikawa Kiyoshi, Yoshida Kei, Kanie Kei, Omori Kenji, Kato Ryuji
SLAS DISCOVERY
Vol.
24
(
1
)
page：
47
-
56
2019.1
-
Image-based Morphometric Analysis for Evaluation of CellularResponses
Kato Ryuji
Abstracts for Annual Meeting of Japanese Proteomics Society
Vol.
2019
(
0
)
page：
131
-
131
2019
-
In-process evaluation of culture errors using morphology-based image analysis.
Reviewed
Imai Yuta, Yoshida Kei, Matsumoto Megumi, Okada Mai, Kanie Kei, Shimizu Kazunori, Honda Hiroyuki, Kato Ryuji
REGENERATIVE THERAPY
Vol.
9
(
15
)
page：
15
-
23
2018.12
-
Effective screening for hypolipidemic bile acid-binding peptides by hierarchical clustering-based catalog array.
Reviewed
Kato Ryuji, Kanie Kei, Kaga Chiaki, Okochi Mina, Nagaoka Satoshi, Honda Hiroyuki
JOURNAL OF BIOSCIENCE BIOTECHNOLOGY AND APPLIED BIOCHEMISTRY
Vol.
1
(
1
)
page：
doi: 10.31546/BBAB.1001
2018.8
-
Imaging cell picker: A morphology-based automatedcell separation system on a photodegradable hydrogel culture platform.
Reviewed
Mayu Shibuta, Masato Tamura, Kei Kanie, Masumi Yanagisawa, Hirofumi Matsui, Taku Satoh, Toshiyuki Takagi, Toshiyuki Kanamori, Shinji Sugiura, Ryuji Kato
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
126
(
5
)
page：
653
-
660
2018.6
-
Development of image-based informatics as non-invasive quality control technology for controlling regenerative medicine product
Kato Ryuji
SEIBUTSU KOUGAKU KAISHI
Vol.
96
(
3
)
page：
121
-
128
2018
-
Cell Image-Based Informatics for Control of Cell-Based Therapeutic Product Manufacturing
KATO Ryuji
Journal of the Japan Society for Precision Engineering
Vol.
84
(
11
)
page：
901
-
904
2018
-
Morphology-based non-invasive quantitative prediction of the differentiationstatus of neural stem cells.
Reviewed
Fujitani Masaya, Huddin Noor Safika, Kawai Shun, Kanie Kei, Kiyota Yasujiro, Shimizu Kazunori, Honda Hiroyuki, Kato Ryuji
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
124
(
3
)
page：
351
-
358
2017.9
-
Heat-stimuli-enhanced osteogenesis using clinically available biomaterials.
Reviewed
Ota Takehiro, Nishida Yoshihiro, Ikuta Kunihiro, Kato Ryuji, Kozawa Eiji, Hamada Shunsuke, Sakai Tomohisa, Ishiguro Naoki
PLOS ONE
Vol.
12
(
7
)
page：
e0181404
2017.7
-
Visualization of morphological categories of colonies formonitoring of effect on induced pluripotent stem cell culture status.
Reviewed
Nagasaka Risako, Matsumoto Megumi, Okada Mai, Sasaki Hiroto, Kanie Kei, Kii Hiroaki, Uozumi Takayuki, Kiyota Yasujiro, Honda Hiroyuki, Kato Ryuji
REGENERATIVE THERAPY
Vol.
6
page：
41
-
51
2017.6
-
Image-based cell quality evaluation to detect irregularities under same cultureprocess of human induced pluripotent stem cells.
Reviewed
Nagasaka Risako, Gotou Yuto, Yoshida Kei, Kanie Kei, Shimizu Kazunori, Honda Hiroyuki, Kato Ryuji
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
123
(
5
)
page：
642
-
650
2017.5
-
Prediction of differentiation tendency toward hepatocytes from gene expression in undifferentiated human pluripotent stem cells.
Reviewed
Yanagihara Kana, Liu Yujung, Kanie Kei, Takayama Kazuo, Kokunugi Minako, Hirata Mitsuhi, Fukuda Takayuki, Suga Mika, Nikawa Hiroki, Mizuguchi Hiroyuki, Kato Ryuji, Furue-Kusuda Miho
STEM CELLS AND DEVELOPMENT
Vol.
25
(
24
)
page：
1884
-
1897
2016.12
-
Focused screening of ECM-selective adhesion peptides on cellulose-bound peptide microarrays.
Reviewed
Kanie Kei, Kondo Yuto, Owaki Junki, Ikeda Yurika, Narita Yuji, Kato Ryuji, Honda Hiroyuki
BIOENGINEERING (BASEL)
Vol.
3
(
4
)
page：
31
2016.11
-
Combinational effects of polymer viscoelasticity and immobilized peptides on cell adhesion to cell-selective scaffolds.
Reviewed
Kurimoto Rio, Kanie Kei, Uto Koichiro, Kawai Shun, Hara Mitsuo, Nagano Shusaku, Narita Yuji, Honda Hiroyuki, Naito Masanobu, Ebara Mitsuhiro, Kato Ryuji
ANALYTICAL SCIENCES
Vol.
32
(
11
)
page：
1195
-
1202
2016.11
-
Parametric analysis of colony morphology of non-labelled live human pluripotent stem cells for cell quality control.
Reviewed
Kato Ryuji, Matsumoto Megumi, Sasaki Hiroto, Joto Risako, Okada Mai, Ikeda Yurika, Kanie Kei, Suga Mika, Kinehara Masaki, Yanagihara Kana, Liu Yujung, Uchio-Yamada Kozue, Fukuda Takayuki, Kii Hiroaki, Uozumi Takayuki, Honda Hiroyuki, Kiyota Yasujiro, Furue-Kusuda Miho
SCIENTIFIC REPORTS
Vol.
6
page：
34009
2016.9
-
Exploring high-affinity binding properties of octamer peptides by principal component analysisof tetramer peptides.
Reviewed
Kume Akiko, Kawai Shun, Kato Ryuji, Iwata Shinmei, Shimizu Kazunori, Honda Hiroyuki
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
123
(
2
)
page：
230
-
238
2016.9
-
Screeningof osteogenic-enhancing short peptides from BMPs for biomimetic material applications.
Reviewed
Kanie Kei, Kurimoto Rio, Tian Jing, Ebisawa Katsumi, Narita Yuji, Honda Hiroyuki, Kato Ryuji
MATERIALS (BASEL)
Vol.
9
(
9
)
page：
730
2016.9
-
Morphological evaluation of nonlabeled cells to detect stimulation of nerve growth factor expression by Lyconadin B.
Reviewed
Kawai Shun, Sasaki Hiroto, Okada Norihiro, Kanie Kei, Yokoshima Satoshi, Fukuyama Tohru, Honda Hiroyuki, Kato Ryuji
JOURNAL OF BIOMOLECULAR SCREENING
Vol.
21
(
8
)
page：
795
-
803
2016.9
-
Non-invasive quality evaluation of confluent cells by image-based orientation heterogeneity analysis
Reviewed
Sasaki Kei, Sasaki Hiroto, Takahashi Atsuki, Kang Siu, Yuasa Tetsuya, Kato Ryuji
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
121
(
2
)
page：
227
-
234
2016.2
-
Comparisons of cellculture medium using distribution of morphological features in microdevice.
Reviewed
Sasaki Hiroto, Enomoto Junko, Ikeda Yurika, Honda Hiroyuki, Fukuda Junji, Kato Ryuji
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
121
(
1
)
page：
117
-
123
2016.1
-
Combinational effect of cell adhesion biomolecules and their immobilized polymer property to enhance cell-selective adhesion.
Reviewed
Kurimoto Rio, Kei Kanie, Koichiro Uto, Shun Kawai, Mitsuo Hara, Shusaku Nagano, Yuji Narita, Hiroyuki Honda, Masanobu Naito, Mitsuhiro Ebara, Ryuji Kato
INTERNATIONAL JOURNAL OF POLYMER SCIENCE
Vol.
2016
page：
2090985
2016
-
Combinational effects of polymer viscoelasticity and immobilized peptides on cell adhesion to cell-selective scaffolds.
Reviewed
Kurimoto Rio, Kei Kanie, Koichiro Uto, Shun Kawai, Mitsuo Hara, Shusaku Nagano, Yuji Narita, Hiroyuki Honda, Masanobu Naito, Mitsuhiro Ebara, Ryuji Kato
ANALYTICAL SCIENCES
Vol.
32
(
11
)
page：
1195
-
1202
2016
-
Differential variability and correlation of geneexpression identifies key genes involved in neuronal differentiation.
Reviewed
Ando Tatsuya, Kato Ryuji, Honda Hiroyuki
BMC SYSTEMS BIOLOGY
Vol.
9
(
1
)
page：
82
2015.11
-
Image-based focusedcounting of dividing cells for non-invasive monitoring of regenerative medicineproducts.
Reviewed
Sasaki K, Miyata H, Sasaki H, Kang S, Yuasa T, Kato R.
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
120
(
5
)
page：
582
-
590
2015.11
-
Image-based focused counting of dividing cells for non-invasive monitoring of regenerative medicine products
Reviewed
Sasaki Kei, Miyata Hirofumi, Sasaki Hiroto, Kang Siu, Yuasa Tetsuya, Kato Ryuji
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
120
(
5
)
page：
582
-
590
2015.11
-
Effects of theproperties of short peptides conjugated with cell-penetrating peptides on theirinternalization into cells.
Reviewed
Matsumoto Ryo, Okochi Mina, Shimizu Kazunori, Kanie Kei, Kato Ryuji, Honda Hiroyuki
SCIENTIFIC REPORTS
Vol.
5
page：
12884
2015.8
-
Non-invasive quality evaluation of confluent cells by orientation analysis
Sasaki Kei, Sasaki Hiroto, Takahashi Atsuki, Kanie Kei, Kang Siu, Kato Ryuji, Yuasa Tetsuya
IEICE TECHNICAL REPORT
Vol.
114
(
482
)
page：
167
-
172
2015.3
-
Identification of an interactionbetween VWF rs7965413 and platelet count as a novel risk marker for metabolicsyndrome an extensive search of candidate polymorphisms in a case-controlstudy.
Reviewed
Nakatochi Masahiro, Ushida Yasunori, Yasuda Yoshinari, Yoshida Yasuko, Kawai Shun, Kato Ryuji, Nakashima Toru, Iwata Masamitsu, Kuwatsuka Yachiyo, Ando Masahiko, Hamajima Nobuyuki, Kondo Takaaki, Oda Hiroaki, Hayashi Mutsuharu, Kato Sawako, Yamaguchi Makoto, Maruyama Shoichi, Matsuo Seiichi, Honda Hiroyuki
PLOS ONE
Vol.
10
(
2
)
page：
e0117591
2015.2
-
In vivo heat-stimulus-triggered osteogenesis.
Reviewed
Ikuta Kunihiro, Urakawa Hiroshi, Kozawa Eiji, Hamada Shunsuke, Ota Takehiro, Kato Ryuji, Honda Hiroyuki, Kobayashi Takeshi, Ishiguro Naoki, Nishida Yoshihiro
INTERNATIONAL JOURNAL OF HYPERTHERMIA
Vol.
31
(
1
)
page：
58
-
66
2015.2
-
Characterization of time-course morphological features for efficientprediction of osteogenic potential in human mesenchymal stem cells.
Reviewed
Matsuoka Fumiko, Takeuchi Ichiro, Agata Hideki, Kagami Hideaki, Shiono Hirofumi, Kiyota Yasujiro, Honda Hiroyuki, Kato Ryuji
BIOTECHNOLOGY AND BIOENGINEERING
Vol.
111
(
7
)
page：
1430
-
1439
2014.7
-
Label-free morphology-based prediction of multiple differentiation potentials ofhuman mesenchymal stem cells for early evaluation of intact cells.
Reviewed
Sasaki Hiroto, Takeuchi Ichiro, Okada Mai, Sawada Rumi, Kanie Kei, Kiyota Yasujiro, Honda Hiroyuki, Kato Ryuji
PLOS ONE
Vol.
9
(
4
)
page：
e93952
2014.4
-
The screening strategy of functional peptides derived from scaffold protein by peptide array and its possibility
Kanie Kei, Kato Ryuji
KAGAKU TO SEIBUTSU
Vol.
52
(
6
)
page：
361
-
370
2014
-
培養中の幹細胞品質評価 : 画像を用いた評価技術とその貢献 (特集 再生医療実現に向けた幹細胞培養工学の最前線)
加藤 竜司, 清田 泰次郎, 備瀬 竜馬
生物工学会誌
Vol.
92
(
9
)
page：
495
-
499
2014
-
Orientation based segmentation for phase-contrast microscopic image of confluent cell
Reviewed
Sasaki Kei, Yuasa Tetsuya, Sasaki Hiroto, Kato Ryuji
PROCEEDINGS OF THE ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY
page：
3323
-
3326
2013.10
-
Screening of peptide ligands that bind to the Fc region of IgG using peptide array and its application to affinity purification of antibody
Reviewed
Sugita Tomoya, Katayama Makoto, Okochi Mina, Kato Ryuji, Ichihara Takamitsu, Honda Hiroyuki
BIOCHEMICAL ENGINEERING JOURNAL
Vol.
79
page：
33
-
40
2013.10
-
Analysing the substrate multispecificity of a proton-coupled oligopeptide transporter using a dipeptide library.
Reviewed
Ito Keisuke, Hikida Aya, Kawai Shun, Vu Thi Tuyet Lan, Motoyama Takayasu, Kitagawa Sayuri, Yoshikawa Yuko, Kato Ryuji, Kawarasaki Yasuaki
NATURE COMMUNICATIONS
Vol.
4
page：
2502
2013.9
-
Morphology-based prediction of osteogenic differentiation potential of humanmesenchymal stem cells.
Reviewed
Matsuoka Fumiko, Takeuchi Ichiro, Agata Hideki, Kagami Hideaki, Shiono Hirofumi, Kiyota Yasujiro, Honda Hiroyuki, Kato Ryuji
PLOS ONE
Vol.
8
(
2
)
page：
e55082
2013.2
-
Systematic analysis of a dipeptide library for inhibitor development using human dipeptidyl peptidase IV produced by a Saccharomyces cerevisiae expression system
Reviewed
Hikida Aya, Ito Keisuke, Motoyama Takayasu, Kato Ryuji, Kawarasaki Yasuaki
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
Vol.
430
(
4
)
page：
1217
-
1222
2013.1
-
Comprehensive Combination Analysis for Screening of Significant Peptide Epitopes Using a Slide Glass Type-Exclusive Peptide Array from Milk Protein
Reviewed
Nakatochi Masahiro, Katayama Makoto, Kato Ryuji, Okochi Mina, Takase Tomokazu, Yoshida Yasuko, Kawase Mitsuo, Honda Hiroyuki
KAGAKU KOGAKU RONBUNSHU
Vol.
39
(
1
)
page：
40
-
45
2013
-
Screening and application of cell-selective adhesion peptide for regenerative medical materials
Vol.
51
(
3
)
page：
202
-
206
2013
-
Orientation based segmentation for phase-contrast microscopic image of confluent cell
Reviewed
Sasaki Kei, Yuasa Tetsuya, Sasaki Hiroto, Kato Ryuji
2013 35TH ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY (EMBC)
page：
3323
-
3326
2013
-
実用化に資する医薬品生産培養技術の課題と展開～抗体医薬品から細胞医薬品まで～)
長森 英二, 加藤 竜司, 清水 一憲, 柳原 佳奈
生物工学会誌
Vol.
91
(
9
)
2013
-
Combinational risk factors ofmetabolic syndrome identified by fuzzy neural network analysis of health-checkdata.
Reviewed
Ushida Yasunori, Kato Ryuji, Niwa Kosuke, Tanimura Daisuke, Izawa Hideo, Yasui Kenji, Takase Tomokazu, Yoshida Yasuko, Kawase Mitsuo, Yoshida Tsutomu, Murohara Toyoaki, Honda Hiroyuki
BMC MEDICAL INFORMATICS AND DECISION MAKING
Vol.
12
(
1
)
page：
80
2012.8
-
Screening for silver nanoparticle-binding peptides by using a peptide array
Reviewed
Kuboyama Masashi, Kato Ryuji, Okochi Mina, Honda Hiroyuki
BIOCHEMICAL ENGINEERING JOURNAL
Vol.
66
page：
73
-
77
2012.7
-
Collagen type IV-specific tripeptides forselective adhesion of endothelial and smooth muscle cells.
Reviewed
Kanie Kei, Narita Yuji, Zhao Yingzi, Kuwabara Fumiaki, Satake Makoto, Honda Susumu, Kaneko Hiroaki, Yoshioka Tomohiko, Okochi Mina, Honda Hiroyuki, Kato Ryuji
BIOTECHNOLOGY AND BIOENGINEERING
Vol.
109
(
7
)
page：
1808
-
1816
2012.7
-
Screening of an α-amylaseinhibitor peptide by photolinker-peptide array.
Reviewed
Ochiai Takashi, Sugita Tomoya, Kato Ryuji, Okochi Mina, Honda Hiroyuki
BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY
Vol.
76
(
4
)
page：
819
-
824
2012.4
-
Cell-Selective Peptide Distribution in Human Collagen Proteins
Reviewed
KOBUNSHI RONBUNSHU
Vol.
69
(
3
)
page：
129
-
134
2012.3
-
Segmentation and feature extraction of cell images with phase-contrast microscope
IEICE TECHNICAL REPORT
Vol.
111
(
389
)
page：
343
-
348
2012.1
-
Image-based cell quality assessment: Modeling of cell morphology and quality for clinical cell therapy
Reviewed
Sasaki Hiroto, Matsuoka Fumiko, Yamamoto Wakana, Kojima Kenji, Honda Hiroyuki, Kato Ryuji
COMPUTATIONAL MODELING IN TISSUE ENGINEERING
Vol.
10
page：
207
-
226
2012.1
-
Novel small-caliber vascular grafts with trimeric peptide for acceleration of endothelialization.
Reviewed
Kuwabara Fumiaki, Narita Yuji, Yamawaki-Ogata Aika, Kanie Kei, Kato Ryuji, Satake Makoto, Kaneko Hiroaki, Oshima Hideki, Usui Akihiko, Ueda Yuichi
ANNALS OF THORACIC SURGERY
Vol.
93
(
1
)
page：
156
-
163
2012.1
-
Enhancement of the Activity of a Lactobacilli-Aggregating Peptide by Freezing Treatment
Reviewed
Asai Yuji, Sugita Tomoya, Kato Ryuji, Okochi Mina, Nakagawa Kyuya, Honda Hiroyuki
JOURNAL OF CHEMICAL ENGINEERING OF JAPAN
Vol.
45
(
8
)
page：
609
-
614
2012
-
Screening of peptides with a high affinity to bile acids using peptide arraysand a computational analysis.
Reviewed
Takeshita Toshiyuki, Okochi Mina, Kato Ryuji, Kaga Chiaki, Tomita Yasuyuki, Nagaoka Satoshi, Honda Hiroyuki
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
112
(
1
)
page：
92
-
97
2011.4
-
The ratio of adiponectinto homeostasis model assessment of insulin resistance is a powerful index ofeach component of metabolic syndrome in an aged Japanese population resultsfrom the KING Study.
Reviewed
Nakatochi Masahiro, Miyata Seiko, Tanimura Daisuke, Izawa Hideo, Asano Hiroyuki, Murase Yosuke, Kato Ryuji, Ichihara Sahoko, Naruse Keiko, Matsubara Tatsuaki, Honda Hiroyuki, Yokota Mitsuhiro
DIABETES RESEARCH AND CLINICAL PRACTICE
Vol.
92
(
3
)
page：
61
-
65
2011.3
-
Amino acid sequence preferences to control cell-specific organization of endothelial cells, smooth muscle cells, and fibroblasts.
Reviewed
International journal
Kanie Kei, Kato Ryuji, Zhao Yingzi, Narita Yuji, Okochi Mina, Honda Hiroyuki
JOURNAL OF PEPTIDE RESEARCH
Vol.
17
(
6
)
page：
479
-
486
2011.2
-
Gingival and dermal fibroblasts their similarities anddifferences revealed from gene expression.
Reviewed
Ebisawa Katsumi, Kato Ryuji, Okada Mai, Sugimura Tomotaka, Abdul Latif Mazlyzam, Hori Yusuke, Narita Yuji, Ueda Minoru, Honda Hiroyuki, Kagami Hideaki
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
111
(
3
)
page：
255
-
258
2011.2
-
Peptide array-based peptide-cell interaction analysis.
Reviewed
International journal
Kato Ryuji, Kaga Chiaki, Kanie Kei, Kunimatsu Mitoshi, Okochi Mina, Honda Hiroyuki
MINI-REVIEWS OF ORGANIC CHEMISTRY
Vol.
8
(
2
)
page：
171
-
177
2011
-
Screening ofpeptides with a high affinity for ZnO using spot-synthesized peptide arrays andcomputational analysis.
Reviewed
International journal
Okochi Mina, Ogawa Masatoshi, Kaga Chiaki, Sugita Tomoya, Tomita Yasuaki, Kato Ryuji< Honda Hiroyuki
ACTA BIOMATERIALIA
Vol.
6
(
6
)
page：
2301
-
2306
2010.12
-
Acompact, automated cell culture system for clinical scale cell expansion fromprimary tissues.
Reviewed
International journal
Kato Ryuji, Iejima Daisuke, Agata Hideki, Asahina Izumi, Okada Kunihiko, Ueda Minoru, Honda Hiroyuki, Kagami Hideaki
TISSUE ENGINEERING PART C METHODS
Vol.
16
(
5
)
page：
947
-
956
2010.11
-
Novel strategy for prevention ofesophageal stricture after endoscopic surgery.
Reviewed
International journal
Mizutani Taro, Tadauchi Akimitsu, Arinobe Manabu, Narita Yuji, Kato Ryuji, Niwa Yasumasa, Ohmiya Naoki, Itoh Akihiro, Hirooka Yoshiki, Honda Hiroyuki, Ueda Minoru, Goto Hidemi
HEPATOGASTROENTEROLOGY
Vol.
57
(
102-103
)
page：
1150
-
1156
2010.9
-
Practical cell labeling with magnetitecationic liposomes for cell manipulation.
Reviewed
International journal
Ito Hiroshi, Nonogaki Yurika, Kato Ryuji, Honda Hiroyuki
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
110
(
1
)
page：
124
-
129
2010.2
-
Directed evolution of angiotensin II-inhibiting peptides using a microbeaddisplay.
Reviewed
International journal
Gan Rui, Furuzawa Seiji, Kojima Takaaki, Kanie Keie, Kato Ryuji, Okochi Mina, Honda Hiroyuki, Nakano Hideo
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
109
(
4
)
page：
411
-
417
2009.11
-
Magnetic manipulation device for theoptimization of cell processing conditions.
Reviewed
International journal
Ito Hiroshi, Kato Ryuji, Ino Kosuke, Honda Hiroyuki
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
109
(
2
)
page：
182
-
188
2009.8
-
Peptide array-based analysis of the specific IgE andIgG4 in cow's milk allergens and its use in allergy evaluation.
Reviewed
International journal
Matsumoto Naoki, Okochi Mina, Matsushima Miyoko, Kato Ryuji, Takase Tomokazu, Yoshida Yasuko, Kawase Mitsuo, Isobe Ken-ichi, Kawabe Tsutomu, Honda Hiroyuki
PEPTIDES
Vol.
30
(
10
)
page：
1840
-
1847
2009.7
-
Cancer DNA microarrayanalysis considering multi-subclass with graph-based clustering method.
Reviewed
International journal
Kawamura Takashi, Hutoh Hironori, Tomita Yasuyuki, Kato Ryuji, Honda Hiroyuk
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
106
(
5
)
page：
442
-
448
2008.12
-
Size dependent heat generation of magnetite nanoparticles under AC magneticfield for cancer therapy.
Reviewed
International journal
Motoyama Jun, Hakata Toshiyuki, Kato Ryuji, Yamashita Noriyuki, Morino Tomio, Kobayashi Takeshi, Honda Hiroyuki
BIOMAGNETIC RESEARCH AND TECHNOLOGY
Vol.
6
page：
4
2008.10
-
A motif detection and classificationmethod for peptide sequences using genetic programming.
Reviewed
International journal
Tomita Yasuyuki, Kato Ryuji, Okochi Mina, Honda Hiroyuki
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
106
(
2
)
page：
154
-
161
2008.9
-
Screening of anovel octamer peptide, CNSCWSKD, that induces caspase-dependent cell death.
Reviewed
International journal
Kaga Chiaki, Okochi Mina, Nakanishi Mari, Hayashi Hiroki, Kato Ryuji, Honda Hiroyuki
BIOCHEMICAL AND BIOPHYSICAL RESARCH COMMUNICATIONS
Vol.
362
(
4
)
page：
1063
-
1068
2008.8
-
Computationally assistedscreening and design of cell-interactive peptides by a cell-based assay usingpeptide arrays and a fuzzy neural network algorithm.
Reviewed
International journal
Kaga Chiaki, Okochi Mina, Tomoita Yasuyuki, Kato Ryuji, Honda Hiroyuki
BIOTECHNIQUES
Vol.
44
(
3
)
page：
393
-
402
2008.5
-
Identification of HLA-A24-restricted epitopes with high affinities to Hsp70using peptide arrays.
Reviewed
International journal
Okochi Mina, Hayashi Hiroki, Ito Akira, Kato Ryuji, Tamura Yasuaki, Sato Noriyuki, Honda Hiroyuki
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
105
(
3
)
page：
198
-
203
2008.4
-
Screening of cell adhesive peptide from the human laminin-5 alpha 3 chain globular 2 and 3 domains.
Reviewed
International journal
Okochi Mina, Nomura Shigeyuki, Kaga Chiaki, Honda Hiroyuki
JOURNAL OF CHEMICAL ENGINEERING OF JAPAN
Vol.
41
(
3
)
page：
206
-
209
2008.3
-
Cryopreservation of mouse adipose tissue-derived stem/progenitorcells.
Reviewed
International journal
Oishi Koichi, Noguchi Hirofumi, Yukawa Hiroshi, Miyazaki Takamichi, Kato Ryuji, Kitagawa Yasuo, Ueda Minoru, Hayashi Shuji
CELL TRANSPLANTATION
Vol.
17
(
1-2
)
page：
35
-
41
2008.1
-
Peptide array-basedinteraction assay of solid-bound peptides and anchorage-dependant cells and itseffectiveness in cell-adhesive peptide design.
Reviewed
International journal
Kato Ryuji, Kaga Chiaki, Kunimatsu Mitoshi, Kobayashi Takeshi, Honda Hiroyuki
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
101
(
6
)
page：
485
-
495
2006.8
-
High-throughputscreening of cell death inducible short peptides from TNF-related apoptosis-inducing ligand sequence.
Reviewed
International journal
Okochi Mina, Nakanishi Mari, Kato Ryuji, Kobayashi Takeshi, Honda Hiroyuki
FEBS LETTERS
Vol.
580
(
3
)
page：
885
-
889
2006.1
-
Novel strategy for protein exploration high-throughput screening assisted withfuzzy neural network.
Reviewed
International journal
Kato Ryuji, Nakano Hideo, Konishi Hiroyuki, Kato Katsuya, Koga Yuchi, Yamane Tsuneo, Kobayashi Takeshi, Honda Hiroyuki
JOURNAL OF MOLECULAR BIOLOGY
Vol.
351
(
3
)
page：
683
-
692
2005.6
-
Angiotensin IIinhibitory peptide found in the receptor sequence using peptide array.
Reviewed
International journal
Kato Ryuji, Kunimatsu Mitoshi, Fujimoto Seigo, Kobayashi Takeshi, Honda Hiroyuki
BIOCHEMICAL AND BIOPHYSICAL RESARCH COMMUNICATIONS
Vol.
315
(
1
)
page：
22
-
29
2004.1
-
Hidden Markov model-based approach as the first screening of binding peptides that interact with MHC class II molecules.
Reviewed
International journal
Kato Ryuji, Noguchi Hideki, Honda Hiroyuki, Kobayashi Takeshi
ENZYME AND MICROBIAL TECHNOLOGY
Vol.
33
(
4
)
page：
472
-
481
2003.6
-
Hidden Markov model-based prediction of antigenic peptides that interact with MHC class II molecules.
Reviewed
International coauthorship
International journal
Noguchi Hideki, Kato Ryuji, Hanai Taizo, Matubara Yukari, Honda Hiroyuki, Vladimir Brusic, Kobayashi Takeshi
JOURNAL OF BIOSCIENCE AND BIOENGINEERING
Vol.
94
(
3
)
page：
264
-
270
2002.11
