Organization
Institute for Glyco-core Research Designated associate professor
Title
Designated associate professor
NIBU Yutaka
Research History 7
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Tokai National Higher Education and Research System, Nagoya University Institute for Glyco-core Research (iGCORE) Designated Associate Professor
2022.5
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Tokyo University of Agriculture and Technology University Research Administration Center Senior Assistant Professor, Research Administrator
2018 - 2022.4
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University of Tsukuba Research Administration/Management Office Research Administrator
2015
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Weill Cornell Medicine Department of Cell and Developmental Biology Assistant Professor
2002
Country：United States
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JSPS Postdoctoral Fellowships for Research Abroad
1998 - 2000
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University of California at Berkeley Department of Molecular and Cell Biology Postdoctoral Fellow, Associate Specialist
1997
Country：United States
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University of Tsukuba Institute of Applied Biochemistry Research Associate
1995
Education 1
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University of Tsukuba Graduate School of Agricultural Sciences, Division of Applied Biochemistry
- 1995
Professional Memberships 6
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Research Manager and Administrator Network Japan
2015
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The Genetics Society of America
2002 - 2013
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The Society for Developmental Biology
2002 - 2013
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American Association for the Advancement of Science
1998 - 2004
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日本分子生物学会
1992 - 2002
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日本生化学会
1992 - 1997
Papers 28
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Natto extract, a Japanese fermented soybean food, directly inhibits viral infections including SARS-CoV-2 in vitro Reviewed
Mami Oba, Wen Rongduo, Akatsuki Saito, Tamaki Okabayashi, Tomoko Yokota, Junko Yasuoka, Yoko Sato, Koji Nishifuji, Hitoshi Wake, Yutaka Nibu, Tetsuya Mizutani
Biochemical and Biophysical Research Communications Vol. 570 page： 21 - 25 2021.9
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Sano, H., Nakamura, A., Texada, M.J., Truman, J.W., Ishimoto, H., Kamikouchi, A., Nibu, Y., Kume, K., Ida, T., Kojima, M.
PLoS Genetics Vol. 11 ( 5 ) page： e1005209 2015.5
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Brachyury, Foxa2 and the cis-Regulatory Origins of the Notochord Reviewed
José-Edwards, D.S., Oda-Ishii, I., Kugler, J.E., Passamaneck, Y.J., Katikala, L., Nibu, Y., Di Gregorio, A.
PLoS Genetics Vol. 11 ( 12 ) 2015
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From notochord formation to hereditary chordoma: The many roles of brachyury Reviewed
Nibu, Y., José-Edwards, D.S., Di Gregorio, A.
BioMed Research International Vol. 2013 page： 1 - 14 2013
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Aihara, H., Katikala, L., Zeller, R.W., Di Gregorio, A., Nibu, Y.
Marine Biotechnology Vol. 15 ( 5 ) page： 520 - 525 2013
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Katikala, L., Aihara, H., Passamaneck, Y.J., Gazdoiu, S., José-Edwards, D.S., Kugler, J.E., Oda-Ishii, I., Imai, J.H., Nibu, Y., Di Gregorio, A.
PLoS Biology Vol. 11 ( 10 ) page： e1001697 2013
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Nowak, S.J., Aihara, H., Gonzalez, K., Nibu, Y., Baylies, M.K.
PLoS Genetics Vol. 8 ( 3 ) page： e1002547 2012
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Tbx2/3 is an essential mediator within the brachyury gene network during Ciona notochord development Reviewed
José-Edwards, D.S., Oda-Ishii, I., Nibu, Y., Di Gregorio, A.
Development (Cambridge) Vol. 140 ( 11 ) 2012
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CtBP is required for proper development of peripheral nervous system in Drosophila Reviewed
Stern, M.D., Aihara, H., Roccaro, G.A., Cheung, L., Zhang, H., Negeri, D., Nibu, Y.
Mechanisms of Development Vol. 126 ( 1-2 ) 2009
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Qi, D., Bergman, M., Aihara, H., Nibu, Y., Mannervik, M.
EMBO Journal Vol. 27 ( 6 ) 2008
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Stern, M.D., Aihara, H., Cho, K.-H., Kim, G.-T., Horiguchi, G., Roccaro, G.A., Guevara, E., Sun, H.H., Negeri, D., Tsukaya, H., Nibu, Y.
Development Genes and Evolution Vol. 217 ( 11-12 ) 2007
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Lilja, T., Aihara, H., Stabell, M., Nibu, Y., Mannervik, M.
Developmental Biology Vol. 305 ( 2 ) 2007
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Finb, a multiple zinc finger protein, represses transcription of the human angiotensinogen gene. Reviewed
Date, S., Nibu, Y., Yanai, K., Hirata, J., Yagami, K., Fukamizu, A.
International journal of molecular medicine Vol. 13 ( 5 ) 2004
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CtBP-independent repression in the Drosophila embryo Reviewed
Nibu, Y., Senger, K., Levine, M.
Molecular and Cellular Biology Vol. 23 ( 11 ) 2003
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Berman, B.P., Nibu, Y., Pfeiffer, B.D., Tomancak, P., Celniker, S.E., Levine, M., Rubin, G.M., Eisen, M.B.
Proceedings of the National Academy of Sciences of the United States of America Vol. 99 ( 2 ) page： 757 - 757 2002
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CtBP-dependent activities of the short-range giant repressor in the Drosophila embryo Reviewed
Nibu, Y., Levine, M.S.
Proceedings of the National Academy of Sciences of the United States of America Vol. 98 ( 11 ) 2001
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Local action of long-range repressors in the Drosophila embryo Reviewed
Nibu, Y., Zhang, H., Levine, M.
EMBO Journal Vol. 20 ( 9 ) 2001
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Yanai, K., Hirota, K., Taniguchi-Yanai, K., Shigematsu, Y., Shimamoto, Y., Saito, T., Chowdhury, S., Takiguchi, M., Arakawa, M., Nibu, Y., Sugiyama, F., Yagami, K.-I., Fukamizu, A.
Journal of Biological Chemistry Vol. 274 ( 49 ) 1999
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Transcriptional coregulators in development Reviewed
Mannervik, M., Nibu, Y., Zhang, H., Levine, M.
Science Vol. 284 ( 5414 ) page： 606 - 609 1999
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dCtBP mediates transcriptional repression by Knirps, Kruppel and Snail in the Drosophila embryo Reviewed
Nibu, Y., Zhang, H., Bajor, E., Barolo, S., Small, S., Levine, M.
EMBO Journal Vol. 17 ( 23 ) page： 7009 - 7020 1998
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The tumor suppressor protein CtBP mediates short-range repression in the Drosophila embryo
Nibu, Y., Zhang, H., Ohtsuki, S., Levine, M.
FASEB Journal Vol. 12 ( 8 ) 1998
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Interaction of short-range repressors with Drosophila CtBP in the embryo Reviewed
Nibu, Y., Zhang, H., Levine, M.
Science Vol. 280 ( 5360 ) page： 101 - 103 1998
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Characterization of a novel Alginate Lyase from Flavobacterium multivolum K-11. Reviewed
Takeuchi T, Nibu Y, Murata K, Yoshida S, Kusakabe I
Food Sci. Technol. Int. Vol. 3 ( 4 ) page： 288 - 392 1997
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Takeuchi T, Nibu Y, Murata K, Kusakabe I
Food Sci. Technol. Int. Vol. 3 ( 1 ) page： 22 - 26 1997
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Yanai, K., Nibu, Y., Murakami, K., Fukamizu, A.
Journal of Biological Chemistry Vol. 271 ( 27 ) 1996
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Human activin βA gene: Identification of novel 5′ exon, functional promoter, and enhancers Reviewed
Tanimoto, K., Yoshida, E., Mita, S., Nibu, Y., Murakami, K., Fukamizu, A.
Journal of Biological Chemistry Vol. 271 ( 51 ) 1996
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Kobayashi, S.-i., Ohnishi, J., Nibu, Y., Nishimatsu, S.-i., Umemura, S., Ishii, M., Murakami, K., Miyazaki, H.
BBA - Gene Structure and Expression Vol. 1262 ( 2-3 ) 1995
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Purification and characterization of extracellular alginate lyase from enterobacter cloacae m-1 Reviewed
Nibu, Y., Satoh, T., Nishi, Y., Takeuchi, T., Murata, K., Kusakabe, I.
Bioscience, Biotechnology and Biochemistry Vol. 59 ( 4 ) page： 632 - 637 1995
Books 7
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「東京農工大学の研究活動とその社会貢献」木材工業 76, 402-405, 2021年
二歩 裕
木材工業 2021.10
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「俯瞰ワークショップ報告書 社会および産業競争力を支える基盤としての環境リスク評価研究」CRDS-FY2019-WR-05（分担執筆）
国立研究開発法人科学技術振興機構 2020
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「東京農工大学における共同研究推進の取り組み」pp203-210. 書籍の題：「共同研究開発の進め方と契約のポイント」
二歩 裕, 伊藤 伸
技術情報協会出版 2020
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「戦略プロポーザル 環境調和型プラスチック戦略〜化学物質としてのプラスチックの安全な管理・活用を推進するための戦略的研究〜」CRDS-FY2019-SP-07（分担執筆）
（国立研究開発法人科学技術振興機構 研究開発戦略センター）
国立研究開発法人科学技術振興機構 2020
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Transcriptional repression by the CtBP corepressor in Drosophila. In: CtBP Family Proteins (ed. D. Chinnadurai), Chapter 2, p18-27
Aihara H, Perrone L, Nibu Y（Chapter 2, p18-27）
Landes Bioscience 2007
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Transcriptional repressors and repression mechanisms. In: Gene Expression and Regulation (ed. J. Ma), Chapter 09, p159-173
Perrone L, Aihara H, Nibu Y（Chapter 09, p159-173）
Current Scientific Frontiers Book, Higher Education Press 2006
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New aspect of the renin-angiotensin system: focus on regulation of human angiotensinogen gene. Blood Vessel and Endothelium 6(5), 478-486 (1996), in Japanese
Nibu Y, Fukamizu A
1996
MISC 2
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Regulated expression of human angiotensinogen gene by HNF4 and COUP-TF
K Hirota, K Yanai, K Taniguchi-Yanai, Y Shigematsu, Y Shimamoto, T Saito, M Arakawa, Y Nibu, A Fukamizu
JOURNAL OF HYPERTENSION Vol. 18 page： S183 - S183 2000
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Functional characterization of the Factor Binding to the 3'Downstream Enhan cer Core Element of human Angiotensinogen Gene
DATE S., YANAI K., NIBU Y., MURAKAMI K., FUKAMIZU A.
Vol. 21 page： 397 - 397 1998.12
Presentations 10
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東京農工大学におけるチーム型研究の推進とベンチャー創出・育成の取組
齋藤 憲一郎, 二歩 裕, 前畑 英雄
RA協議会第7回年次大会 2021.9.14
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民間企業からの投資のゆくえ -産学連携の伸びしろの可能性-
佐野 恵利子, 伊藤 広幸, 二歩 裕
RA協議会第7回年次大会 2021.9.14
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A new strategy to facilitate academia-industry research collaboration and research expense hunting using disclosed information at University of Tsukuba.
Sazawa H, Akutsu Y, Komatsubara S, Nukaga M, Ito M, Nibu Y, Baba T
INORMS 2016 (The International Network of Research Management Societies) 2016
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筑波大学の国際産学連携の方針と部局から生まれた社会での応用事例 Invited
二歩裕
日本台湾産学連携推進セミナー（台北駐日経済文化代表処） 2016
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研究マネジメント人材の獲得戦略 〜ニーズに呼応したトランスフォーメーション〜
伊藤広幸, 佐野恵利子, 二歩 裕
研究・イノベーション学会第37年次学術大会 2022.10.30
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次世代の研究力マップ -博士人材育成を起源とする研究力指標-
伊藤 広幸, 佐野 恵利子, 二歩 裕
RA協議会第5回年次大会 2019
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主要国における分野別論文数の動向 -2つの書誌データベースの特⻑を知り、活かして、上手に活用するには-」
二歩 裕, 伊藤 広幸, 佐野 恵利子
RA協議会第4回年次大会 2018
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URAの業務拡大と求められる専門性の変化(II)
佐野 恵利子, 伊藤 広幸, 二歩 裕
RA協議会第8回年次大会 2022.8.30
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URAの業務拡大と求められる専門性の変化
佐野 恵利子, 伊藤 広幸, 二歩 裕
RA協議会第6回年次大会 2020
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Strategy from building of interdisciplinary research to global collaborations at Tokyo University of Agriculture and Technology.
Nibu Y, Saito K
INORMS 2021 (The International Network of Research Management Societies ) 2021
Other research activities 7
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社会還元加速プログラム（SCORE）大学推進型（大学推進型（拠点都市環境整備型） 事業 『T-UNITE(Tokyo United Network for Innovation with Technology and Entrepreneurs)』 2021年度 起業家育成講座を運営する指導・支援人材の育成プログラム（コーチング研修、スタートアップ講座、デザイン思考コース）修了
2022 -
Virtual Teaching and Learning Studio program (vTLS), Hasso Plattner Institute of Design (d.school), Stanford University
2021 -
Waseda University T-UNITE – Babson Global Symposium for Entrepreneurship Educators
2021 -
JST 目利き人材育成研修、研究推進マネジメントコース 修了
2018 -
筑波大学Rcus大学マネジメントセミナー 修了
2018 -
RA協議会リサーチアドミニストレーター新任研修 修了
2016 -
JST プログラムマネージャー（PM）育成・活躍推進プログラム研修 修了
2015-2016
Social Contribution 1
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講義 ニューヨーク市立小学校（PS78）
Role(s)：Lecturer
2012
Academic Activities 3
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RA協議会第6回年次大会 実行委員/セッション担当
Role(s)：Planning, management, etc.
2020
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写真提供 第一学習社「高等学校生物」と「最新図説生物」
2013
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Gene ControlのChapter 8: Gene Control and Cellular Signalling Pathways（第8章「遺伝子調節とシグナル伝達経路」）日本語訳
2012