Updated on 2025/10/22

写真a

 
TAKEUCHI Ryosuke
 
Organization
Graduate School of Pharmaceutical Sciences Department of Basic Medicinal Sciences Bioscience Assistant Professor
Graduate School
Graduate School of Pharmaceutical Sciences
Title
Assistant Professor
External link

Degree 1

  1. 博士(理学) ( 2018.3   大阪大学 ) 

Research Interests 4

  1. Neuroscience

  2. Neural circuit

  3. neuroimaging

  4. Virtual Reality

Research Areas 2

  1. Life Science / Neuroscience - general

  2. Life Science / Biomedical engineering

Professional Memberships 2

  1. THE JAPAN NEUROSCIENCE SOCIETY

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  2. JAPANESE NEURAL NETWORK SOCIETY

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Committee Memberships 1

  1. 日本神経科学学会   将来計画委員  

    2021.4 - 2022.3   

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    Committee type:Academic society

Awards 3

  1. 日本神経回路学会最優秀研究賞

    2018.12   日本神経回路学会   自然動画に含まれる画像特徴量に対するサルV1野およびV4野の神経細胞群の応答

    畑中岳 , 池添貢司 , 竹内遼介 , 稲垣未来男 , 西本伸志 , 藤田一郎

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    Award type:Award from Japanese society, conference, symposium, etc.  Country:Japan

  2. NSR Excellent Paper Award

    2023.3   The Japan Neuroscience Society   Monosynaptic rabies virus tracing from projection-targeted single neurons

    Yuji Masaki, Masahiro Yamaguchi, Ryosuke F. Takeuchi, Fumitaka Osakada

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  3. NSR Excellent Paper Award

    2022.3   The Japan Neuroscience Society   Temporally multiplexed dual-plane imaging of neural activity with four-dimensional precision

    Masanari Onda, Ryosuke F. Takeuchi, Keisuke Isobe, Toshiaki Suzuki, Yuji Masaki, Nao Morimoto, Fumitaka Osakada

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Papers 12

  1. An extension module for a two-photon microscope enables flexible<i> in</i><i> vivo</i> imaging and all-optical physiology Reviewed International journal Open Access

    Takeuchi, RF; Ishida, R; Kamaguchi, R; Nishimura, M; Tsutsumi, K; Ito, KN; Adachi, S; Isobe, K; Osakada, F

    ISCIENCE   Vol. 28 ( 10 ) page: 113525   2025.10

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    Authorship:Lead author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:Iscience  

    Two-photon imaging is essential for revealing the structure, function, and interaction of various cell types. However, conventional two-photon microscopes have limitations in sample accessibility and optogenetic manipulation during imaging. Here, we present Ex2p/Ex2pO, an open-source extension module that adds an objective lens rotation axis and one-photon optical stimulation synchronized with the non-imaging intervals of resonant scanning to a two-photon microscope. The Ex2p/Ex2pO can be seamlessly integrated into existing microscopes by simply replacing the standard objective lens assembly without any modifications. It enables imaging of curved structures while maintaining the subject's natural posture and simultaneous imaging and one-photon stimulation with low crosstalk between stimulation and fluorescent light. We demonstrate one-photon stimulation during two-photon imaging of mice behaving in a virtual reality environment and pluripotent stem cell-derived cortical organoids. Thus, Ex2p/Ex2pO expands the versatility to investigate neural circuit motifs in behaving animals and organoids, enabling all-optical physiology in existing two-photon imaging systems.

    DOI: 10.1016/j.isci.2025.113525

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  2. YORU: social behavior detection based on user-defined animal appearance using deep learning International journal

    Hayato M Yamanouchi, Ryosuke F Takeuchi, Naoya Chiba, Koichi Hashimoto, Takashi Shimizu, Ryoya Tanaka, Azusa Kamikouchi

        2024.11

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    Authorship:Lead author   Language:English   Publishing type:Research paper (bulletin of university, research institution)  

    DOI: 10.1101/2024.11.12.623320

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  3. Posteromedial cortical networks encode visuomotor prediction errors. International journal

    Ryosuke F. Takeuchi, Akinori Y. Sato, Kei N. Ito, Hiroshi Yokoyama, Reiji Miyata, Rumina Ueda, Konosuke Kitajima, Riki Kamaguchi, Toshiaki Suzuki, Keisuke Isobe, Naoki Honda, Fumitaka Osakada

        2024.8

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    Authorship:Lead author   Language:English   Publishing type:Research paper (bulletin of university, research institution)   Publisher:Cold Spring Harbor Laboratory  

    Predicting future events based on internal models is essential for animal survival. Predictive coding postulates that errors between prediction and observation in lower-order areas update predictions in higher-order areas through the hierarchy. However, it is unclear how predictive coding is implemented in the hierarchy of the brain. Herein, we report the neural mechanism of the hierarchical processing and transmission of bottom-up prediction error signals in the mouse cortex. Ca2+ imaging and electrophysiological recording in virtual reality revealed responses to visuomotor mismatches in the retrosplenial, dorsal visual, and anterior cingulate cortex. These mismatch responses were attenuated when mismatches became predictable through experience. Optogenetic inhibition of bottom-up signals reduced a behavioral indicator for prediction errors. Moreover, cellular-level mismatch responses were modeled by Bayesian inference using a state-space model. This study demonstrates hierarchical circuit organization underlying prediction error propagation, advancing the understanding of predictive coding in sensory perception and learning in the brain.

    DOI: 10.1101/2022.08.16.504075

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  4. Conversion of silent synapses to AMPA receptor-mediated functional synapses in human cortical organoids Reviewed International journal Open Access

    Nishimura, M; Kodera, T; Adachi, S; Sato, AY; Takeuchi, RF; Nonaka, H; Hamachi, I; Osakada, F

    NEUROSCIENCE RESEARCH   Vol. 212   page: 20 - 30   2025.3

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Neuroscience Research  

    Despite the crucial role of synaptic connections and neural activity in the development and organization of cortical circuits, the mechanisms underlying the formation of functional synaptic connections in the developing human cerebral cortex remain unclear. We investigated the development of α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptor (AMPAR)-mediated synaptic transmission using human cortical organoids (hCOs) derived from induced pluripotent stem cells. Two-photon Ca<sup>2</sup>⁺ imaging revealed an increase in the frequency and amplitude of spontaneous activity in hCOs on day 80 compared to day 50. Additionally, spontaneous neural activity in late-stage hCOs, but not in early-stage hCOs, was blocked by N-methyl-D-aspartate receptor (NMDAR) and AMPAR antagonists. However, transsynaptic circuit tracing with G-deleted rabies viral vectors indicated a similar number of synaptic connections in early- and late-stage hCOs. Notably, chemical labeling demonstrated a significant increase in AMPAR expression on the postsynaptic membrane and colocalization with NMDARs in late-stage hCOs. These results suggest that hCOs progressively organize excitatory synaptic transmission, concurrent with the transition from silent synapses lacking AMPARs to functional synapses containing NMDARs and AMPARs. This in vitro model of human cortical circuits derived from induced pluripotent stem cells reflects the developmental programs underlying physiological transitions, providing valuable insights into human corticogenesis and neurodevelopmental disorders.

    DOI: 10.1016/j.neures.2024.12.008

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  5. Evolutionary engineering and characterization of Sendai virus mutants capable of persistent infection and autonomous production Reviewed International journal Open Access

    Iwata, M; Kawabata, R; Morimoto, N; Takeuchi, RF; Sakaguchi, T; Irie, T; Osakada, F

    FRONTIERS IN VIROLOGY   Vol. 4   2024.4

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Frontiers in Virology  

    Persistent virus infection involves modifying the host immune response and maintaining viral infection. Acute infection with Mononegavirales, such as Sendai viruses (SeVs), can give rise to viruses capable of persistent infection. SeVs establish persistent infection through generating copyback-type defective interfering (cbDI) genomes or acquiring temperature-sensitive mutations. Herein, we identify novel mutations associated with persistent infection and recombinant SeV mutants capable of persistent infection and autonomous production at physiological body temperature, independent of cbDI genomes or temperature-sensitive mutations. Diverse SeV populations were generated by passing the cDNA-recovered SeV Z strain 19 times through embryonated chicken eggs and subsequently infecting LLC-MK2 cells with the SeV populations to finally obtain SeV mutants capable of persistent infection and autonomous production in several types of cultured cells. Sequence analysis identified 4 or 5 mutations in the genome of the persistently infectious SeVs, distinguishing them from other existing strains with persistent infection. Recombinant SeVs carrying 4 or 5 mutations in the Z strain genome (designated SeV-Zpi or SeV-Zpi2, respectively) exhibited persistent infection and autonomous production in LLC-MK2, BHK-21, and Neuro2a cells at 37°C. SeV-Zpi and SeV-Zpi2 consistently produced viral particles even after long-term passages without cbDI particles or temperature-sensitive phenotypes. These results highlight the ability of acute infections of SeVs to spontaneously acquire mutations during replication, thereby endowing persistent infection and autonomous production at body temperature. The vectorization of SeV-Zpi and SeV-Zpi2 will contribute to both basic research and medical applications.

    DOI: 10.3389/fviro.2024.1363092

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  6. A mosaic adeno-associated virus vector as a versatile tool that exhibits high levels of transgene expression and neuron specificity in primate brain Reviewed International journal

    Kei Kimura, Yuji Nagai, Gaku Hatanaka, Yang Fang, Soshi Tanabe, Andi Zheng, Maki Fujiwara, Mayuko Nakano, Yukiko Hori, Ryosuke F. Takeuchi, Mikio Inagaki, Takafumi Minamimoto, Ichiro Fujita, Ken-ichi Inoue, Masahiko Takada

    Nature Communications   Vol. 14 ( 1 )   2023.8

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Springer Science and Business Media LLC  

    Abstract

    Recent emphasis has been placed on gene transduction mediated through recombinant adeno-associated virus (AAV) vector to manipulate activity of neurons and their circuitry in the primate brain. In the present study, we created a novel vector of which capsid was composed of capsid proteins derived from both of the AAV serotypes 1 and 2 (AAV1 and AAV2). Following the injection into the frontal cortex of macaque monkeys, this mosaic vector, termed AAV2.1 vector, was found to exhibit the excellence in transgene expression (for AAV1 vector) and neuron specificity (for AAV2 vector) simultaneously. To explore its applicability to chemogenetic manipulation and in vivo calcium imaging, the AAV2.1 vector expressing excitatory DREADDs or GCaMP was injected into the striatum or the visual cortex of macaque monkeys, respectively. Our results have defined that such vectors secure intense and stable expression of the target proteins and yield conspicuous modulation and imaging of neuronal activity.

    DOI: 10.1038/s41467-023-40436-1

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    Other Link: https://www.nature.com/articles/s41467-023-40436-1

  7. 生体イメージングの最前線--絶え間ない技術革新と生命医科学の新展開 イメージングで神経活動を解析する 神経回路機能解析のための細胞種特異的な標識と光学イメージング

    竹内 遼介, 小坂田 文隆

    医学のあゆみ   Vol. 286 ( 5 ) page: 372 - 379   2023.7

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    Authorship:Lead author   Publishing type:Part of collection (book)   Publisher:医歯薬出版  

    DOI: 10.32118/ayu28605372

    CiNii Research

  8. Modeling the marmoset brain using embryonic stem cell-derived cerebral assembloids Open Access

    Kodera T., Takeuchi R.F., Takahashi S., Suzuki K., Kassai H., Aiba A., Shiozawa S., Okano H., Osakada F.

    Biochemical and Biophysical Research Communications   Vol. 657   page: 119 - 127   2023.5

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    Language:English   Publisher:Biochemical and Biophysical Research Communications  

    Studying the non-human primate (NHP) brain is required for the translation of rodent research to humans, but remains a challenge for molecular, cellular, and circuit-level analyses in the NHP brain due to the lack of in vitro NHP brain system. Here, we report an in vitro NHP cerebral model using marmoset (Callithrix jacchus) embryonic stem cell-derived cerebral assembloids (CAs) that recapitulate inhibitory neuron migration and cortical network activity. Cortical organoids (COs) and ganglionic eminence organoids (GEOs) were induced from cjESCs and fused to generate CAs. GEO cells expressing the inhibitory neuron marker LHX6 migrated toward the cortical side of CAs. COs developed their spontaneous neural activity from a synchronized pattern to an unsynchronized pattern as COs matured. CAs containing excitatory and inhibitory neurons showed mature neural activity with an unsynchronized pattern. The CAs represent a powerful in vitro model for studying excitatory and inhibitory neuron interactions, cortical dynamics, and their dysfunction. The marmoset assembloid system will provide an in vitro platform for the NHP neurobiology and facilitate translation into humans in neuroscience research, regenerative medicine, and drug discovery.

    DOI: 10.1016/j.bbrc.2023.03.019

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  9. Processing of visual statistics of naturalistic videos in macaque visual areas V1 and V4. Reviewed International journal Open Access

    Hatanaka G, Inagaki M, Takeuchi RF, Nishimoto S, Ikezoe K, Fujita I

    Brain structure & function   Vol. 227 ( 4 ) page: 1385 - 1403   2022.5

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  10. Monosynaptic rabies virus tracing from projection-targeted single neurons Reviewed International journal Open Access

      Vol. 178   page: 20 - 32   2022.5

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  11. Temporally multiplexed dual-plane imaging of neural activity with four-dimensional precision Reviewed International journal Open Access

    Onda Masanari, Takeuchi Ryosuke F., Isobe Keisuke, Suzuki Toshiaki, Masaki Yuji, Morimoto Nao, Osakada Fumitaka

    NEUROSCIENCE RESEARCH   Vol. 171   page: 9 - 18   2021.10

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    Language:Japanese   Publisher:Neuroscience Research  

    Spatiotemporal patterns of neural activity generate brain functions, such as perception, memory, and behavior. Four-dimensional (4-D: x, y, z, t) analyses of such neural activity will facilitate understanding of brain functions. However, conventional two-photon microscope systems observe single-plane brain tissue alone at a time with cellular resolution. It faces a trade-off between the spatial resolution in the x-, y-, and z-axes and the temporal resolution by a limited point-by-point scan speed. To overcome this trade-off in 4-D imaging, we developed a holographic two-photon microscope for dual-plane imaging. A spatial light modulator (SLM) provided an additional focal plane at a different depth. Temporal multiplexing of split lasers with an optical chopper allowed fast imaging of two different focal planes. We simultaneously recorded the activities of neurons on layers 2/3 and 5 of the cerebral cortex in awake mice in vivo. The present study demonstrated the proof-of-concept of dual-plane two-photon imaging of neural circuits by using the temporally multiplexed SLM-based microscope. The temporally multiplexed holographic microscope, combined with in vivo labeling with genetically encoded probes, enabled 4-D imaging and analysis of neural activities at cellular resolution and physiological timescales. Large-scale 4-D imaging and analysis will facilitate studies of not only the nervous system but also of various biological systems.

    DOI: 10.1016/j.neures.2021.02.001

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  12. Cell type- and layer-specific convergence in core and shell neurons of the dorsal lateral geniculate nucleus Reviewed International journal

    Okigawa S., Yamaguchi M., Ito K.N., Takeuchi R.F., Morimoto N., Osakada F.

    Journal of Comparative Neurology   Vol. 529 ( 8 ) page: 2099 - 2124   2021.6

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    Language:Japanese   Publisher:Journal of Comparative Neurology  

    Over 40 distinct types of retinal ganglion cells (RGCs) generate parallel processing pathways in the visual system. In mice, two subdivisions of the dorsal lateral geniculate nucleus (dLGN), the core and the shell, organize distinct parallel channels to transmit visual information from the retina to the primary visual cortex (V1). To investigate how the dLGN core and shell differentially integrate visual information and other modalities, we mapped synaptic input sources to each dLGN subdivision at the cell-type level with G-deleted rabies viral vectors. The monosynaptic circuit tracing revealed that dLGN core neurons received inputs from alpha-RGCs, Layer 6 neurons of the V1, the superficial and intermediate layers of the superior colliculus (SC), the internal ventral LGN, the lower layer of the external ventral LGN (vLGNe), the intergeniculate leaf, the thalamic reticular nucleus (TRN), and the pretectal nucleus (PT). Conversely, shell neurons received inputs from alpha-RGCs and direction-selective ganglion cells of the retina, Layer 6 neurons of the V1, the superficial layer of the SC, the superficial and lower layers of the vLGNe, the TRN, the PT, and the parabigeminal nucleus. The present study provides anatomical evidence of the cell type- and layer-specific convergence in dLGN core and shell neurons. These findings suggest that dLGN core neurons integrate and process more multimodal information along with visual information than shell neurons and that LGN core and shell neurons integrate different types of information, send their own convergent information to discrete populations of the V1, and differentially contribute to visual perception and behavior.

    DOI: 10.1002/cne.25075

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MISC 2

  1. 神経回路機能解析のための細胞種特異的な標識と光学イメージング

    竹内遼介, 小坂田文隆

    医学のあゆみ     2023.7

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    Authorship:Lead author   Language:Japanese   Publishing type:Article, review, commentary, editorial, etc. (scientific journal)  

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  2. 背側視覚経路の機能と回路構造

    佐藤 彰典, 竹内 遼介, 小坂田 文隆

    Clinical Neuroscience   Vol. 40 ( 1 ) page: 21 - 25   2022.1

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    Language:Japanese   Publishing type:Article, review, commentary, editorial, etc. (scientific journal)   Publisher:(株)中外医学社  

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Presentations 1

  1. Dorsal cortical pathway for visuomotor predictive coding in the brain Invited

    Ryosuke F TAKEUCHI, Akinori Y Sato, Kei N Ito, Hiroshi Yokoyama, Reiji Miyata, Rumina Ueda, Konosuke Kitajima, Riki Kamaguchi, Masahiro Yamaguchi, Toshiaki Suzuki, Keisuke Isobe, Naoki Honda, Fumitaka Osakada

    NEURO2024  2024.7.27 

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    Event date: 2024 - 2024.7

    Presentation type:Symposium, workshop panel (public)  

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KAKENHI (Grants-in-Aid for Scientific Research) 2

  1. 広域機能イメージングと投影光遺伝学による大域的神経活動の因果的分析

    Grant number:22K15620  2022.4 - 2025.3

    科学研究費助成事業  若手研究

    竹内 遼介

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\4680000 ( Direct Cost: \3600000 、 Indirect Cost:\1080000 )

    脳内で離れた領域同士の情報連絡は,認知や運動,またその連合機能の発現に重要である.
    申請者は,本研究で構築する光学顕微鏡により,課題を遂行中のマウスにおいて,①大域的神経活動パターンの観察・同定,②大域的 / 局所的神経活動操作,③ 活動操作によって起きた行動の観察・定量
    を行う.これらの解析を通し,脳領域間の相互作用がどのように行動に寄与するかを明らかにする.
    今年度は光感受性チャネルタンパクの発現最適化,カルシウムイメージングデータの信号処理法の最適化,電気生理学的手法による活動操作の validation のための準備,行動評価系の最適化などを行った.
    まず,大脳皮質の光遺伝学にしようするチャネルタンパクの発現を誘導するためのウイルスベクター条件について最適化を行った.複数種類のAAV-PHP.eBベクターをカクテルすることで,単一野生型マウス個体の大脳皮質においてGCaMPとChRmine を広く発現させることに成功した.また,ノイズを多分に含む広域カルシウムイメージングデータから,神経活動に関連性が低い成分を除くアルゴリズムを実装し,アーティファクトを除去することに成功している.大脳皮質の広範囲を高解像度で観察可能にする観察窓の手術法についても確立し,二光子顕微鏡による細胞レベルでの観察が可能なこと,上記信号処理法により血管由来アーティファクトを軽減できることも確認した.投影光遺伝学法では,投影光により実際に神経活動が誘発されたかどうかをカルシウムイメージング法だけでなく,細胞外電位記録法による validation を計画している.今年度はシリコンプローブを用いて覚醒下,ヴァーチャルリアリティ内で行動中のマウスから高精度で活動電位および Local Field Potential を記録できる手法の確立に成功しており,今後投影光との組み合わせて投影光遺伝学法の評価を行う予定である.また,蛍光観察・電気生理学的手法による神経活動記録,光刺激,行動観察をすべて同時に行うシステムとして次年度の学会報告および学術誌への発表を目指す.
    光学部品等の都合上,顕微鏡の設備更新に時間を要している.当初使用予定にしていたDigital mirror device およびレーザーモジュールが長期に亘り欠品状態のため,別途使用可能な部品を選定中である.また,光感受性チャネルを広域発現させた生体の行動変容および致死が見受けられたため,その最適化にも時間を要した.
    細胞外電位記録法による記録,解析および評価法確立やカルシウムイメージング法の解析法開発に関しては当初の予定通り進行しており,研究遂行において深刻な遅れには至っていないと判断している.
    2023年度早期に代替の光学部品を入手し,観察装置,光刺激装置およびその制御系を完成させ,実証実験にすすみたい.レーザープロジェクタの入手が困難であった場合は一旦ガルバノミラーデバイス等による光刺激法を導入し,同一固体,多波長での光刺激・蛍光観察が可能であるかをまず検証する.同時に,電気生理学的記録とそれらが組み合わせられるよう,視覚刺激ディスプレイ等との同期制御システムなどを最適化し,最終的には光刺激・蛍光観察・電気生理学的記録がすべて同時に行える実験系を構築する.

  2. A neural basis of the visuomotor integration with multi-scale functional imaging analysis

    Grant number:20K16464  2020.4 - 2022.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Early-Career Scientists  Grant-in-Aid for Early-Career Scientists

    Takeuchi Ryosuke

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\4160000 ( Direct Cost: \3200000 、 Indirect Cost:\960000 )

    Using wide-field calcium imaging from mice with pan-excitatory neuron expression of GCaMP, we found that dorsal visual cortical areas and RSP significantly responded to visuomotor mismatches between visual flow feedback and mouse movement. Predictability of the visuomotor mismatch based on prior experiences significantly affected neural responses and the information flow in the posterior medial areas. Thus, we conclude that prediction error signals were hierarchically encoded and propagated across posterior cortical areas.

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