Updated on 2021/10/06

写真a

 
YAMAUCHI Takaki
 
Organization
Bioscience and Biotechnology Center Associate professor
Graduate School
Graduate School of Bioagricultural Sciences
Title
Associate professor
Contact information
メールアドレス

Degree 1

  1. Doctor of agriculture ( 2009.9   Chiba University ) 

Research Interests 3

  1. Tolerance to environmental stress

  2. Environmental adaptation

  3. 収量・バイオマス

Research Areas 1

  1. Environmental Science/Agriculture Science / Science in plant genetics and breeding

Current Research Project and SDGs 3

  1. 作物の収量性やバイオマスに関連する根の解剖学的形質の解析

  2. 作物の環境ストレス耐性に貢献する根の解剖学的形質の解析

  3. 野生植物の適応形質の探索と制御機構の解析

Research History 7

  1. Nagoya University   Bioscience and Biotechnology Center   Associate professor

    2021.1

  2. Japan Science and Technology Agency (JST)   PRESTO   Researcher

    2017.10

  3. The University of Tokyo   Graduate School of Agricultural and Life Sciences   Researcher

    2017.4 - 2017.9

  4. Nagoya University   Graduate School of Bioagricultural Sciences   Researcher

    2015.4 - 2017.3

  5. Japan Society for Promotion of Science   Postdoctoral Fellow,   Researcher

    2012.4 - 2015.3

  6. Nagoya University   Graduate School of Bioagricultural Sciences   Researcher

    2011.4 - 2012.3

  7. The University of Tokyo   Graduate School of Agricultural and Life Sciences   Researcher

    2009.4 - 2011.3

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Education 3

  1. Chiba University   Graduate School of Science and Technology

    2006.4 - 2009.9

  2. Chiba University   Graduate School of Science and Technology

    2004.4 - 2006.3

  3. Chiba University   Faculty of Horticulture

    2000.4 - 2004.3

Professional Memberships 3

  1. JAPANESE SOCIETY OF BREEDING

  2. THE JAPANESE SOCIETY OF PLANT PHYSIOLOGISTS

  3. JAPANESE SOCIETY FOR ROOT RESEARCH

Committee Memberships 4

  1. Japanese Society for Root Research   councilor  

    2020.4   

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    Committee type:Academic society

  2. Plants   Associate Editor  

    2020.3   

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    Committee type:Academic society

  3. Frontiers in Plant Science   Associate Editor  

    2019.2   

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    Committee type:Academic society

  4. Plant Root   Subject Editor  

    2018.4   

Awards 9

  1. MEXT Young Scientists' Prize

    2021.4   Ministry of Education, Culture, Sports, Science and Technology  

  2. Japan Prize in Agricultural Sciences, Achievement Award for Young Scientists

    2019.11   The Foundation of Agricultural Sciences of Japan   Study of Root Anatomical Traits That Contribute to Environmental Adaptation of plants in the family Poaceae.

    Takaki Yamauchi

  3. Young Scientist Award

    2013.10   International Society for Plant Anaerobiosis  

    Takaki Yamauchi

  4. 根研究学会賞 学術奨励賞

    2014.9   根研究学会   イネ科植物の根を対象にした過湿環境に対する応答・適応機構の研究.

    山内卓樹

  5. 日本育種学会第122回講演会優秀発表賞

    2012.9   日本育種学会   コムギの根における通気組織形成と過湿ストレス耐性の評価.

    山内卓樹, 渡邊宏太郎, 高橋宏和, 安倍史高, 川口健太郎, 小柳敦史, 中園幹生

  6. 日本育種学会第121回講演会優秀発表賞

    2012.3   日本育種学会   根の通気組織形成能が低下したイネrcn1変異体におけるエチレン生合成.

    山内卓樹, 塩野克宏, 高牟禮逸朗, 森仁志, 堤伸浩, 加藤清明, 中園幹生

  7. The Best Poster Award

    2011.11   The 10th Tunisia-Japan Symposium on Society, Science and Technology   Study of aerenchyma formation in maize roots during waterlogged conditions.

    Imene Rajhi, Takaki Yamauchi, Hirokazu Takahashi, Shunsaku Nishiuchi, Katsuhiro Shiono, Ryosuke Watanabe, Ahmed Mliki, Yoshiaki Nagamura, Nobuhiro Tsutsumi, Naoko K Nishizawa, Mikio Nakazono

  8. 日本育種学会第120回講演会優秀発表賞

    2011.9   日本育種学会   rcn1変異体を用いたイネの根の通気組織形成遺伝子の発現解析.

    山内卓樹, 塩野克宏, 高牟禮逸朗, 長村吉晃, 堤伸浩, 西澤直子, 加藤清明, 中園幹生

  9. 日本育種学会第118回講演会優秀発表賞

    2010.9   日本育種学会   マイクロアレイによるイネの根の通気組織形成に関わる分子機構の解析.

    山内卓樹, 塩野克宏, 安彦友美, Rajhi Imene, 高牟禮逸朗, 長村吉晃, 堤伸浩, 加藤清明, 中園幹生

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Papers 29

  1. Key root traits of Poaceae for adaptation to soil water gradients Reviewed International coauthorship International journal

    Yamauchi Takaki, Pedersen Ole, Nakazono Mikio, Tsutsumi Nobuhiro

    NEW PHYTOLOGIST   Vol. 229 ( 6 ) page: 3133 - 3140   2021.3

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    Authorship:Lead author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/nph.17093

    Web of Science

    Scopus

  2. Climate-smart crops: key root anatomical traits that confer flooding tolerance Invited Reviewed International journal

    Takaki Yamauchi, Koji Noshita, Nobuhiro Tsutsumi

    BREEDING SCIENCE   Vol. 71 ( 1 ) page: 51 - 61   2021.3

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    Authorship:Lead author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:Japanese Society of Breeding  

    DOI: 10.1270/jsbbs.20119

    Web of Science

    Scopus

    CiNii Article

  3. Distance-to-time conversion using Gompertz model reveals age-dependent aerenchyma formation in rice roots Reviewed International journal

    Yamauchi Takaki, Nakazono Mikio, Inukai Yoshiaki, Tsutsumi Nobuhiro

    PLANT PHYSIOLOGY   Vol. 183 ( 4 ) page: 1424 - 1427   2020.8

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1104/pp.20.00321

    Web of Science

    Scopus

  4. Fine control of aerenchyma and lateral root development through AUX/IAA- and ARF-dependent auxin signaling Reviewed International journal

    Yamauchi Takaki, Tanaka Akihiro, Inahashi Hiroki, Nishizawa Naoko K., Tsutsumi Nobuhiro, Inukai Yoshiaki, Nakazono Mikio

    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA   Vol. 116 ( 41 ) page: 20770 - 20775   2019.10

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    Authorship:Lead author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1073/pnas.1907181116

    Web of Science

    Scopus

  5. Root cortex provides a venue for gas-space formation and is essential for plant adaptation to waterlogging Invited Reviewed International journal

    Yamauchi Takaki, Abe Fumitaka, Tsutsumi Nobuhiro, Nakazono Mikio

    FRONTIERS IN PLANT SCIENCE   Vol. 10   2019.3

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    Authorship:Lead author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.3389/fpls.2019.00259

    Web of Science

    Scopus

  6. Regulation of root traits for internal aeration and tolerance to soil waterlogging-flooding stress Invited Reviewed International coauthorship International journal

    Yamauchi Takaki, Colmer Timothy D., Pedersen Ole, Nakazono Mikio

    PLANT PHYSIOLOGY   Vol. 176 ( 2 ) page: 1118 - 1130   2018.2

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1104/pp.17.01157

    Web of Science

    Scopus

    PubMed

  7. An NADPH oxidase RBOH functions in rice roots during lysigenous aerenchyma formation under oxygen-deficient conditions Reviewed International journal

    PLANT CELL   Vol. 29 ( 4 ) page: 775 - 790   2017.4

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1105/tpc.16.00976

    Web of Science

    Scopus

  8. Targeted gene disruption of ATP synthases 6‐1 and 6‐2 in the mitochondrial genome of Arabidopsis thaliana by mitoTALENs Reviewed International journal

    Shin‐ichi Arimura, Hiroki Ayabe, Hajime Sugaya, Miki Okuno, Yoshiko Tamura, Yu Tsuruta, Yuta Watari, Shungo Yanase, Takaki Yamauchi, Takehiko Itoh, Atsushi Toyoda, Hideki Takanashi, Nobuhiro Tsutsumi

    THE PLANT JOURNAL   Vol. 104 ( 6 ) page: 1457 - 1458   2020.12

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Wiley  

    DOI: 10.1111/tpj.15097

  9. A role for auxin in ethylene-dependent inducible aerenchyma formation in rice roots Invited Reviewed International journal

    Yamauchi Takaki, Tanaka Akihiro, Tsutsumi Nobuhiro, Inukai Yoshiaki, Nakazono Mikio

    PLANTS-BASEL   Vol. 9 ( 5 )   2020.5

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    Authorship:Lead author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.3390/plants9050610

    Web of Science

    Scopus

  10. OsPIN2, which encodes a member of the auxin efflux carrier proteins, is involved in root elongation growth and lateral root formation patterns via the regulation of auxin distribution in rice Reviewed International journal

    Inahashi Hiroki, Shelley Israt J., Yamauchi Takaki, Nishiuchi Shunsaku, Takahashi-Nosaka Misuzu, Matsunami Maya, Ogawa Atsushi, Noda Yusaku, Inukai Yoshiaki

    PHYSIOLOGIA PLANTARUM   Vol. 164 ( 2 ) page: 216 - 225   2018.10

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/ppl.12707

    Web of Science

    Scopus

  11. METALLOTHIONEIN genes encoding ROS scavenging enzymes are down-regulated in the root cortex during inducible aerenchyma formation in rice Invited Reviewed International journal

    Yamauchi Takaki, Fukazawa Aya, Nakazono Mikio

    PLANT SIGNALING & BEHAVIOR   Vol. 12 ( 11 )   2017

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1080/15592324.2017.1388976

    Web of Science

    Scopus

  12. Ethylene-dependent aerenchyma formation in adventitious roots is regulated differently in rice and maize Reviewed International journal

    Yamauchi Takaki, Tanaka Akihiro, Mori Hitoshi, Takamure Itsuro, Kato Kiyoaki, Nakazono Mikio

    PLANT CELL AND ENVIRONMENT   Vol. 39 ( 10 ) page: 2145 - 2157   2016.10

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    Authorship:Lead author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/pce.12766

    Web of Science

  13. Ethylene Biosynthesis Is Promoted by Very-Long-Chain Fatty Acids during Lysigenous Aerenchyma Formation in Rice Roots Invited Reviewed International journal

    Yamauchi Takaki, Shiono Katsuhiro, Nagano Minoru, Fukazawa Aya, Ando Miho, Takamure Itsuro, Mori Hitoshi, Nishizawa Naoko K., Kawai-Yamada Maki, Tsutsumi Nobuhiro, Kato Kiyoaki, Nakazono Mikio

    PLANT PHYSIOLOGY   Vol. 169 ( 1 ) page: 180 - +   2015.9

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1104/pp.15.00106

    Web of Science

  14. Gene Expression Profiles in Jatropha Under Drought Stress and During Recovery Reviewed International journal

    Cartagena Joyce A., Seki Motoaki, Tanaka Maho, Yamauchi Takaki, Sato Shusei, Hirakawa Hideki, Tsuge Takashi

    PLANT MOLECULAR BIOLOGY REPORTER   Vol. 33 ( 4 ) page: 1075 - 1087   2015.8

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s11105-014-0815-0

    Web of Science

  15. The rice RCN11 gene encodes beta 1,2-xylosyltransferase and is required for plant responses to abiotic stresses and phytohormones Reviewed International journal

    Takano Sho, Matsuda Shuichi, Funabiki Atsushi, Furukawa Jun-ichi, Yamauchi Takaki, Tokuji Yoshihiko, Nakazono Mikio, Shinohara Yasuro, Takamure Itsuro, Kato Kiyoaki

    PLANT SCIENCE   Vol. 236   page: 75 - 88   2015.7

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.plantsci.2015.03.022

    Web of Science

  16. Transcript profiles in cortical cells of maize primary root during ethylene-induced lysigenous aerenchyma formation under aerobic conditions Reviewed International coauthorship International journal

    Takahashi Hirokazu, Yamauchi Takaki, Rajhi Imene, Nishizawa Naoko K., Nakazono Mikio

    ANNALS OF BOTANY   Vol. 115 ( 6 ) page: 879 - 894   2015.5

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/aob/mcv018

    Web of Science

  17. Biochemical and molecular characterization of rice (Oryza sativa L.) roots forming a barrier to radial oxygen loss Reviewed International journal

    Kulichikhin Konstantin, Yamauchi Takaki, Watanabe Kohtaro, Nakazono Mikio

    PLANT CELL AND ENVIRONMENT   Vol. 37 ( 10 ) page: 2406 - 2420   2014.10

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/pce.12294

    Web of Science

  18. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa) Reviewed International coauthorship International journal

    Shiono Katsuhiro, Yamauchi Takaki, Yamazaki So, Mohanty Bijayalaxmi, Malik Al Imran, Nagamura Yoshiaki, Nishizawa Naoko K., Tsutsumi Nobuhiro, Colmer Timothy D., Nakazono Mikio

    JOURNAL OF EXPERIMENTAL BOTANY   Vol. 65 ( 17 ) page: 4795 - 4806   2014.9

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/jxb/eru235

    Web of Science

  19. The MET1b gene encoding a maintenance DNA methyltransferase is indispensable for normal development in rice Reviewed International journal

    Yamauchi Takaki, Johzuka-Hisatomi Yasuyo, Terada Rie, Nakamura Ikuo, Iida Shigeru

    PLANT MOLECULAR BIOLOGY   Vol. 85 ( 3 ) page: 219 - 232   2014.6

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s11103-014-0178-9

    Web of Science

  20. Ethylene and reactive oxygen species are involved in root aerenchyma formation and adaptation of wheat seedlings to oxygen-deficient conditions Reviewed International journal

    Yamauchi Takaki, Watanabe Kohtaro, Fukazawa Aya, Mori Hitoshi, Abe Fumitaka, Kawaguchi Kentaro, Oyanagi Atsushi, Nakazono Mikio

    JOURNAL OF EXPERIMENTAL BOTANY   Vol. 65 ( 1 ) page: 261 - 273   2014.1

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    Authorship:Lead author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/jxb/ert371

    Web of Science

  21. Strigolactone and Cytokinin Act Antagonistically in Regulating Rice Mesocotyl Elongation in Darkness Reviewed International coauthorship International journal

    Hu Zhongyuan, Yamauchi Takaki, Yang Jinghua, Jikumaru Yusuke, Tsuchida-Mayama Tomoko, Ichikawa Hiroaki, Takamure Itsuro, Nagamura Yoshiaki, Tsutsumi Nobuhiro, Yamaguchi Shinjiro, Kyozuka Junko, Nakazono Mikio

    PLANT AND CELL PHYSIOLOGY   Vol. 55 ( 1 ) page: 30 - 41   2014.1

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pct150

    Web of Science

  22. Adventitious roots of wheat seedlings that emerge in oxygen-deficient conditions have increased root diameters with highly developed lysigenous aerenchyma Reviewed International journal

    Takaki Yamauchi, Fumitaka Abe, Kentaro Kawaguchi, Atsushi Oyanagi, Mikio Nakazono

    Plant Signaling and Behavior   Vol. 9   2014

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    Authorship:Lead author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:Landes Bioscience  

    Exposing roots of plants to hypoxic conditions is known to greatly improve their anoxic stress tolerance. We previously showed that pre-treatment of wheat seedlings with an ethylene precursor, 1-aminocyclopropanecarboxylic acid (ACC), enhanced their tolerance of oxygen-deficient conditions. Although ACC-pretreated seminal roots of wheat seedlings grown under oxygen-deficient conditions avoided root tip death, they elongated very little. In the present study, we assessed the effects of ethylene on the responses of adventitious roots of wheat seedlings to oxygen-deficient conditions. Lysigenous aerenchyma formation in the adventitious roots of wheat seedlings pretreated with ACC appeared to reduce tip death under oxygen-deficient conditions, but the adventitious roots, like the seminal roots, hardly elongated. We also found that adventitious roots that emerge in oxygen-deficient conditions continued to elongate even under such conditions. The adventitious roots emerged in oxygen-deficient conditions were found to have thicker root diameters than those emerged in aerated conditions. These results suggest that the adventitious roots with thicker root diameters can better cope with oxygen-deficient conditions. Measurements of the area of the lysigenous aerenchyma confirmed that the increased root diameters have a greater amount of air space generated by lysigenous aerenchyma formation. © 2014 Landes Bioscience.

    DOI: 10.4161/psb.28506

    Scopus

    PubMed

  23. Aerenchyma formation in crop species: A review Invited Reviewed International journal

    Yamauchi Takaki, Shimamura Satoshi, Nakazono Mikio, Mochizuki Toshihiro

    FIELD CROPS RESEARCH   Vol. 152   page: 8 - 16   2013.10

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.fcr.2012.12.008

    Web of Science

  24. Screening of candidate genes associated with constitutive aerenchyma formation in adventitious roots of the teosinte Zea nicaraguensis Reviewed International journal

    Tomomi Abiko, Mitsuhiro Obara, Fumitaka Abe, Kentaro Kawaguchi, Atsushi Oyanagi, Takaki Yamauchi, Mikio Nakazono

    Plant Root   Vol. 6   page: 19 - 27   2012.10

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    Language:English   Publishing type:Research paper (scientific journal)  

    Zea nicaraguensis (teosinte), a wild relative of maize (Zea mays ssp. mays), constitutively forms aerenchyma, which contributes to plant waterlogging tolerance, in the root cortex in drained soil, whereas maize (inbred line Mi29) does not. One with highest logarithm of odds (LOD) among quantitative trait loci (QTLs) that control constitutive aerenchyma formation in Z. nicaraguensis is Qaer1.05-6 on chromosome 1. Here, we attempted to identify genes in Qaer1.05-6 by comparing cDNA libraries from Mi29, Z. nicaraguensis and a line BC4F1 #62 carrying Qaer1.05-6. We first confirmed that constitutive aerenchyma formation was apparently observed in the order Z. nicaraguensis &gt
    BC4F1 #62 &gt
    Mi29. Contigs were assembled from cDNAs pooled from the three lines. We identified 1,868 contigs in the region on chromosome 1 that contained Qaer1.05-6. These contigs were screened for contigs that were predominantly composed of cDNAs from BC4F1 #62 and Z. nicaraguensis (no more than 10% of cDNAs from Mi29). Twenty-one such contigs were found and the genes they encoded were identified. In a real-time reverse transcription-polymerase chain reaction (RTPCR) analysis, expression of six of these genes in BC4F1 #62 was at least double that in Mi29, making them candidates for genes associated with constitutive aerenchyma formation. © 2012, Plant Root (JSRR).

    DOI: 10.3117/plantroot.6.19

    Scopus

  25. Mechanisms for coping with submergence and waterlogging in rice Invited Reviewed International journal

    Nishiuchi Shunsaku, Yamauchi Takaki, Takahashi Hirokazu, Kotula Lukasz, Nakazono Mikio

    RICE   Vol. 5 ( 1 ) page: 2   2012

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1186/1939-8433-5-2

    Web of Science

    PubMed

  26. Lysigenous aerenchyma formation in maize root is confined to cortical cells by regulation of genes related to generation and scavenging of reactive oxygen species Reviewed International journal

    Takaki Yamauchi, Imene Rajhi, Mikio Nakazono

    Plant Signaling & Behavior   Vol. 6 ( 5 ) page: 759 - 61   2011.5

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:Informa UK Limited  

    DOI: 10.4161/psb.6.5.15417

    PubMed

  27. Identification of genes expressed in maize root cortical cells during lysigenous aerenchyma formation using laser microdissection and microarray analyses Invited Reviewed International coauthorship International journal

    Rajhi Imene, Yamauchi Takaki, Takahashi Hirokazu, Nishiuchi Shunsaku, Shiono Katsuhiro, Watanabe Ryosuke, Mliki Ahmed, Nagamura Yoshiaki, Tsutsumi Nobuhiro, Nishizawa Naoko K., Nakazono Mikio

    NEW PHYTOLOGIST   Vol. 190 ( 2 ) page: 351 - 368   2011

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/j.1469-8137.2010.03535.x

    Web of Science

  28. Homologous recombination-mediated knock-in targeting of the MET1a gene for a maintenance DNA methyltransferase reproducibly reveals dosage-dependent spatiotemporal gene expression in rice Reviewed International journal

    Takaki Yamauchi, Yasuyo Johzuka-Hisatomi, Sachiko Fukada-Tanaka, Rie Terada, Ikuo Nakamura, Shigeru Iida

    PLANT JOURNAL   Vol. 60 ( 2 ) page: 386 - 396   2009.10

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:WILEY-BLACKWELL PUBLISHING, INC  

    Although homologous recombination-promoted knock-in targeting to monitor the expression of a gene by fusing a reporter gene with its promoter is routine practice in mice, gene targeting to modify endogenous genes in flowering plants remains in its infancy. In the knock-in targeting, the junction sequence between a reporter gene and an endogenous target promoter can be designed properly, and transgenic plants carrying an identical and desired knock-in allele can be repeatedly obtained. By employing a reproducible gene-targeting procedure with positive-negative selection in rice, we were able to obtain fertile transgenic knock-in plants with the promoterless GUS reporter gene encoding beta-glucuronidase fused with the endogenous promoter of MET1a, one of two rice MET1 genes encoding a maintenance DNA methyltransferase. All of the primary (T(0)) transgenic knock-in plants obtained were found to carry only one copy of GUS, with the anticipated structure in the heterozygous condition, and no ectopic events associated with gene targeting could be detected. We showed the reproducible, dosage-dependent and spatiotemporal expression of GUS in the selfed progenies of independently isolated knock-in targeted plants. The results in knock-in targeted plants contrast sharply with the results in transgenic plants with the MET1a promoter-fused GUS reporter gene integrated randomly in the genome: clear interindividual variation of GUS expression was observed among independently obtained plants bearing the randomly integrated transgenes. As our homologous recombination-mediated gene-targeting strategy with positive-negative selection is, in principle, applicable to modify any endogenous gene, knock-in targeting would facilitate basic and applied plant research.

    DOI: 10.1111/j.1365-313X.2009.03947.x

    Web of Science

  29. Alternative splicing of the rice OsMET1 genes encoding maintenance DNA methyltransferase Reviewed International journal

    Takaki Yamauchi, Satoru Moritoh, Yasuyo Johzuka-Hisatomi, Akemi Ono, Rie Terada, Ikuo Nakamura, Shigeru Iida

    JOURNAL OF PLANT PHYSIOLOGY   Vol. 165 ( 17 ) page: 1774 - 1782   2008

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:ELSEVIER GMBH, URBAN & FISCHER VERLAG  

    While the Arabidopsis genome carries one copy of the methyltransferase 1 (MET1) gene for DNA methyltransferase, which is mainly responsible for maintaining CpG methylation, the rice genome bears two copies of the MET1 genes, OsMET1a and OsMET1b. The transcripts of OsMET1b accumulate more abundantly than those of OsMET1a in all of the tissues examined, and both genes actively transcribed at the callus, imbibed embryo, root, meristem, young panicle, anther, pistil, and endosperm, all of which contain actively dividing cells. The OsMET1a transcripts contain two 5'-untranslated exons and alternatively spliced 3'-terminal exons. The alternatively spliced transcripts consist of 14, 15, or 16 exons, and all of them encode a putative protein of 1527 amino acids. While the 3'-terminal exon of OsMET1b is unique, alternative splicing occurs in the T-terminal regions, which comprise either exons containing 5'-untranslated regions or an exon bearing the initiation codon. Depending upon alternative usage of 5' exons by alternative splicing, the OsMET1b transcripts comprise 11, 12, 13, or 14 exons, and the former two and the tatter two longer transcripts encode putative proteins of 1486 and 1529 amino acids, respectively. Moreover, the 5' splicing patterns of OsMET1b can vary in different tissues. These findings are discussed with respect to the possible regulation of the OsMET1 genes. (C) 2007 Elsevier GmbH. All rights reserved.

    DOI: 10.1016/j.jplph.2007.12.003

    Web of Science

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Books 9

  1. 農業技術大系・作物編(追録第41号)

    山内卓樹.( Role: Contributor ,  イネが水田で生育するしくみ ―根の解剖学的観点から―)

    農山漁村文化協会  2020.2 

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    Responsible for pages:基+246の147の2-22   Language:Japanese Book type:General book, introductory book for general audience

  2. イネ大事典

    山内卓樹.( Role: Contributor ,  イネが水田で生育するしくみ ―根の解剖学的観点から―)

    農山漁村文化協会  2020.1  ( ISBN:4540191349

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    Total pages:2178   Responsible for pages:442-462   Language:Japanese Book type:Dictionary, encyclopedia

    CiNii Books

    ASIN

  3. 最新農業技術 作物 vol.9: 特集:水田雑草/イネ多収品種 Reviewed

    山内卓樹.( Role: Contributor ,  イネの過湿土壌への適応に貢献する根の解剖学的特徴)

    農山漁村文化協会  2017.2  ( ISBN:4540160583

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    Total pages:254   Responsible for pages:225-240   Language:Japanese Book type:General book, introductory book for general audience

    CiNii Books

    ASIN

  4. 植物学の百科事典 Reviewed

    山内卓樹, 星野敦.( Role: Contributor ,  遺伝子のノックアウトとノックダウン.)

    丸善出版  2016.6  ( ISBN:9784621300381

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    Total pages:802   Responsible for pages:608-609   Language:Japanese Book type:Dictionary, encyclopedia

    CiNii Books

  5. 農業技術大系・作物編(追録第38号)

    山内卓樹.( Role: Contributor ,  イネの過湿土壌への適応に貢献する根の解剖学的特徴)

    農文協  2016 

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    Responsible for pages:基+246の147の2~基+246の147の17   Language:Japanese Book type:General book, introductory book for general audience

  6. Advances in New Technology for Targeted Modification of Plant Genomes Reviewed

    Yamauchi T, Iida S.( Role: Contributor ,  Gene targeting in crop species with effective selection systems.)

    2015.4 

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    Responsible for pages:91-111   Language:English Book type:Scholarly book

  7. Low-Oxygen Stress in Plants Reviewed International journal

    Takahashi H, Yamauchi T, Colmer TD, Nakazono M.( Role: Contributor ,  Aerenchyma formation in plants)

    Springer  2014.1 

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    Responsible for pages:247-265   Language:English Book type:Scholarly book

  8. 植物のエピジェネティクス : 発生分化、環境適応、進化を制御するDNAとクロマチンの修飾

    定塚(久富)恵世, 星野敦, 森田裕将, 山内卓樹, 朴慶一, 寺田理枝, 森藤暁, 飯田滋.( Role: Contributor ,  アサガオとイネのDNAメチル化と遺伝子発現.)

    秀潤社  2008.4  ( ISBN:9784879623676

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    Total pages:169p   Responsible for pages:36-43   Language:Japanese Book type:Scholarly book

    CiNii Books

  9. Rice Biology in the Genomics Era Reviewed International journal

    Johzuka-Hisatomi Y, Maekawa M, Takagi K, Eun C-H, Yamauchi T, Shimatani Z, Ahmed N, Urawa H, Tsugane K, Terada R, Iida S.( Role: Contributor ,  Homologous recombination-dependent gene targeting and an active DNA transposon nDart-promoted gene tagging for rice functional genomics.)

    Springer  2008 

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    Language:English Book type:Scholarly book

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MISC 7

  1. Measurement of plant tissue porosity: III. Cross-section method Reviewed

    Yasuyuki Nomura, Katsuhiro Shiono, Satoshi Shimamura, Takaki Yamauchi

    Root Research   Vol. 30 ( 3 ) page: 63 - 70   2021.9

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    Authorship:Last author, Corresponding author   Language:Japanese   Publishing type:Article, review, commentary, editorial, etc. (scientific journal)  

    DOI: 10.3117/rootres.30.76

    DOI: 10.3117/rootres.30.76

  2. Measurement of plant tissue porosity: II. Archimedes method Reviewed

    Tomoki Miyashita, Masato Ejiri, Satoshi Shimamura,Takaki Yamauchi, Katsuhiro Shiono

    Root Research   Vol. 30 ( 2 ) page: 41 - 45   2021.6

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    Language:Japanese   Publishing type:Article, review, commentary, editorial, etc. (scientific journal)  

    DOI: 10.3117/rootres.30.41

  3. Measurement of plant tissue porosity: I. Pycnometer method Reviewed

    Satoshi Shimamura, Katsuhiro shiono, Takaki Yamauchi

    Root Research   Vol. 30 ( 1 ) page: 8 - 12   2021.3

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    Language:Japanese   Publishing type:Article, review, commentary, editorial, etc. (scientific journal)  

  4. イネ科植物の根における過湿環境への形態的な応答•適応機構. Invited Reviewed

    山内卓樹, 中園幹生

    根の研究   Vol. 24 ( 1 ) page: 23 - 35   2015.3

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    Authorship:Lead author, Corresponding author   Language:Japanese   Publishing type:Article, review, commentary, editorial, etc. (scientific journal)  

  5. イネ科作物の過湿環境への応答を制御する分子機構. Invited Reviewed

    山内卓樹, 中園幹生

    農業および園芸   Vol. 89 ( 10 ) page: 1023 - 1029   2014.10

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    Authorship:Lead author   Language:Japanese   Publishing type:Article, review, commentary, editorial, etc. (trade magazine, newspaper, online media)  

  6. 植物の通気組織形成過程におけるメタロチオネインの組織特異的な発現制御. Invited Reviewed

    山内卓樹, 西内俊策, 中園幹生

    生化学   Vol. 84 ( 10 ) page: 857 - 862   2012.10

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    Authorship:Lead author   Language:Japanese   Publishing type:Article, review, commentary, editorial, etc. (scientific journal)  

  7. メンデルの法則における不完全優性と植物の遺伝子量効果. Invited Reviewed

    定塚(久富)恵世, 山内卓樹, 飯田滋

    生化学   Vol. 83 ( 7 ) page: 638 - 642   2011.7

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    Language:Japanese   Publishing type:Article, review, commentary, editorial, etc. (scientific journal)  

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Presentations 66

  1. Root anatomical traits that correlate with environmental adaptation of plants Invited

    Takaki Yamauchi

    The 62nd Annual Meeting of the Japanese Society of Plant Physiologists  2021.3.15 

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    Event date: 2021.3

    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

  2. ソルガムRIL集団を用いた根の組織サイズに関するQTL解析

    山内卓樹, 高梨秀樹, 藤本優, 西村明日香, 鐘ヶ江弘美, 矢野健太郎, 岩田洋佳, 坂本亘, 堤伸浩

    日本育種学会第138回講演会  2020.10.10 

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    Event date: 2020.10

    Language:Japanese   Presentation type:Oral presentation (general)  

  3. Environment-Dependent Root Developmental Processes Common in Various Poaceae Species Invited

    Takaki Yamauchi, Mikio Nakazono, Nobuhiro Tsutsumi

    The 61st Annual Meeting of the Japanese Society of Plant Physiologists  2020.3.20 

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    Event date: 2020.3

    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

  4. Hormonal control of internal gas-space formation and its adaptive significance. Invited International conference

    Takaki Yamauchi

    International Symposium on the Future Direction of Plant;Science by Young Researchers  2019.12.17 

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    Event date: 2019.12

    Language:English   Presentation type:Symposium, workshop panel (nominated)  

  5. Anatomical adaptations to gradients in soil water of wild species of Poaceae. International coauthorship International conference

    Takaki Yamauchi, Ole Pedersen, Mikio Nakazono, Nobuhiro Tsutsumi

    13th International Conference on Plant Anaerobiosis  2019.6.5 

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    Event date: 2019.6

    Language:English   Presentation type:Oral presentation (invited, special)  

  6. Additive effect of OsRLCK185 and OsCDPKs on OsRBOHI-mediated ROS burst in Nicotiana benthamiana

    Yoshioka, M, Yamaguchi, K, Yoshimura, S, Nomoto, M, Tada, Y, Yamauchi, T, Ishii T, Nakazono, M, Kawasaki, T, Yoshioka, H

    2020 Annual Meeting of the Phytopathological Society of Japan  2020.3.19 

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    Event date: 2020.3

    Language:Japanese   Presentation type:Oral presentation (general)  

  7. イネの根における通気組織形成を制御するCalcium-dependent Protein Kinase (CDPK) 遺伝子の解析

    石井陽大, 山内卓樹, 高橋宏和, 吉岡美樹, 吉岡博文, 野元美佳, 多田安臣, 中園幹生

    日本育種学会第136回講演会  2019.9.7 

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    Event date: 2019.9

    Language:Japanese   Presentation type:Oral presentation (general)  

  8. Roles of plant hormones in anatomical responses of roots to flooding stress. Invited International conference

    Mikio Nakazono, Takaki Yamauchi

    The 23rd International Conference on Plant Growth Substances  2019.6.26 

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    Event date: 2019.6

    Language:English   Presentation type:Symposium, workshop panel (nominated)  

  9. Molecular mechanisms for constitutive and inducible lysigenous aerenchyma formation in rice root. Invited International conference

    Mikio Nakazono, Takaki Yamauchi, Hirokazu Takahashi, Takahiro Ishii, Miki Yoshioka, Hirofumi Yoshioka, Yoshiaki Inukai

    13th International Conference on Plant Anaerobiosis  2019.6.4 

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    Event date: 2019.6

    Language:English   Presentation type:Oral presentation (invited, special)  

  10. Root traits that determine waterlogging resilience in rice and maize. Invited International coauthorship International conference

    Mikio Nakazono, Takaki Yamauchi, Hirokazu Takahashi, Takahiro Ishii, Miki Yoshioka, Hirofumi Yoshioka, Kohtaro Watanabe, Fumie Omori, Timothy D Colmer, Yoshiro Mano

    KEYSTONE SYMPOSIA: Climate Change-Linked Stress Tolerance in Plants  2019.5.15 

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    Event date: 2019.5

    Language:English   Presentation type:Symposium, workshop panel (nominated)  

  11. イネ科植物の生育地における土壌水分含量と根の解剖学的形質の相関モデルの作出

    山内卓樹, 中園幹生, 堤伸浩

    日本育種学会第135回講演会  2019.3.17 

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    Event date: 2019.3

    Language:Japanese   Presentation type:Oral presentation (general)  

  12. イネの根における誘導的通気組織形成の調節因子の機能解析

    石井陽大, 山内卓樹, 髙橋宏和, 吉岡美樹, 吉岡博文, 中園幹生

    第22回育種学会中部地区談話会  2018.12.12 

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    Event date: 2018.12

    Language:Japanese   Presentation type:Poster presentation  

  13. ソルガムRIL集団を用いた根の解剖学的形質に関するQTL解析

    山内卓樹, 高梨秀樹, 藤本優, 西村明日香, 鐘ヶ江弘美, 矢野健太郎, 岩田洋佳, 坂本亘, 堤伸浩

    第九回ソルガムワークショップ  2018.11.29 

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    Event date: 2018.11

    Language:Japanese   Presentation type:Oral presentation (general)  

  14. ソルガムの系統間における根の解剖学的形質の差異

    山内卓樹, 高梨秀樹, 藤本優, 坂本亘, 堤伸浩

    第八回ソルガムワークショップ  2018.1.23 

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    Event date: 2018.1

    Language:Japanese   Presentation type:Oral presentation (general)  

  15. ソルガム RIL 集団を用いた塩・浸透圧ストレス耐性に関する QTL 解析

    山内卓樹, 高梨秀樹, 藤本優, 鐘ケ江弘美, 石森元幸, 小林正明, 矢野健太郎, 小童谷利恵, 大西紀和, 岩田洋佳, 坂本亘, 堤伸浩

    日本育種学会第132回講演会  2017.10.8 

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    Event date: 2017.10

    Language:Japanese   Presentation type:Poster presentation  

  16. The roles of ethylene and auxin in constitutive lysigenous aerenchyma formation in rice root. Invited International conference

    Mikio Nakazono, Takaki Yamauchi, Akihiro Tanaka, Hiroki Inahashi, Yoshiaki Inukai

    12th International Conference on Plant Anaerobiosis  2016.9.7 

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    Event date: 2016.9

    Language:English   Presentation type:Oral presentation (invited, special)  

  17. イネの少分げつ変異体 rcn11 の解析と原因遺伝子の単離

    高野翔, 松田修一, 船引厚志, 古川潤一, 山内卓樹, 得字圭彦, 中園幹生, 篠原康郎, 高牟禮逸朗, 加藤 清明

    日本育種学会第128回講演会  2015.9.12 

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    Event date: 2015.9

    Language:Japanese   Presentation type:Poster presentation  

  18. イネの根におけるオーキシンシグナル伝達による 恒常的通気組織形成の制御機構

    田中瑛大, 山内卓樹, 稲橋宏樹, 森仁志, 長村吉晃, 西澤直子, 犬飼義明, 中園幹生

    日本育種学会第128回講演会  2015.9.12 

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    Event date: 2015.9

    Language:Japanese   Presentation type:Oral presentation (general)  

  19. イネの根におけるエチレン依存的・非依存的な通気組織形成

    山内卓樹, 田中瑛大, 高牟禮逸朗, 加藤清明, 中園幹生

    日本育種学会第128回講演会  2015.9.12 

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    Event date: 2015.9

    Language:Japanese   Presentation type:Oral presentation (general)  

  20. イネの根における恒常的通気組織形成の分子機構の解析

    田中瑛大, 山内卓樹, 稲橋宏樹, 犬飼義明, 中園幹生

    第22回育種学会中部地区談話会  2014.11.22 

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    Event date: 2014.11

    Language:Japanese   Presentation type:Poster presentation  

  21. イネの根の誘導的通気組織形成機構の解析

    深澤彩, 山内卓樹, 中園幹生

    第22回育種学会中部地区談話会  2014.11.22 

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    Event date: 2014.11

    Language:Japanese   Presentation type:Poster presentation  

  22. 低酸素状態に応答したイネ不定根の皮層組織特異的な細胞肥大の制御機構の解析

    山内卓樹, 田中瑛大, 西澤直子, 中園幹生

    日本育種学会第126回講演会  2014.9.26 

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    Event date: 2014.9

    Language:Japanese   Presentation type:Oral presentation (general)  

  23. イネの根の誘導的通気組織形成過程における活性酸素種の蓄積を 制御する分子機構の解析"

    深澤彩, 山内卓樹, 長村吉晃, 西澤直子, 堤伸浩, 中園幹生

    第41回根研究集会  2014.9.7 

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    Event date: 2014.9

    Language:Japanese   Presentation type:Poster presentation  

  24. ヨシとツルヨシにおける過湿環境への形態的応答の種間差

    山内卓樹, 中園幹生

    第41回根研究集会  2014.9.7 

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    Event date: 2014.9

    Language:Japanese   Presentation type:Poster presentation  

  25. イネ科植物の根を対象にした過湿環境に対する応答・適応機構の研究. Invited

    山内卓樹

    第41回根研究集会  2014.9.6 

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    Event date: 2014.9

    Language:Japanese   Presentation type:Oral presentation (invited, special)  

  26. オーキシンシグナル伝達を介した恒常的通気組織形成の分子機構の解析

    山内卓樹, 田中瑛大, 稲橋宏樹, 長村吉晃, 西澤直子, 犬飼義明, 中園幹生

    イネ遺伝学・分子生物学ワークショップ2014  2014.7.11 

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    Event date: 2014.7

    Language:Japanese   Presentation type:Poster presentation  

  27. イネの根の誘導的通気組織形成過程における極長鎖脂肪酸を介したエチレン生合成の促進

    山内卓樹, 塩野克宏, 高牟禮逸朗, 森仁志, 堤伸浩, 加藤清明, 中園幹生

    日本育種学会第125回講演会  2014.3.22 

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    Event date: 2014.3

    Language:Japanese   Presentation type:Poster presentation  

  28. イネの根の通気組織形成過程における活性酸素種関連遺伝子の組織特異的な発現解析

    深澤彩, 山内卓樹, 長村吉晃, 西澤直子, 堤伸浩, 中園幹生

    第39回根研究集会  2013.11.10 

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    Event date: 2013.11

    Language:Japanese   Presentation type:Oral presentation (general)  

  29. エチレンと活性酸素種によるコムギ幼植物体の嫌気ストレス応答と根の通気組織形成の制御

    山内卓樹, 渡邊宏太郎, 深澤彩, 森仁志, 安倍史高, 川口健太郎, 小柳敦史, 中園幹生

    第39回根研究集会  2013.11.10 

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    Event date: 2013.11

    Language:Japanese   Presentation type:Oral presentation (general)  

  30. OsPIN2遺伝子によるイネの側根形成制御機構

    稲橋宏樹, 山内卓樹, 小川敦史, 犬飼義明

    日本育種学会第124回講演会  2013.10.14 

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    Event date: 2013.10

    Language:Japanese   Presentation type:Poster presentation  

  31. Expression analysis of genes related to generation and scavenging of reactive oxygen species during formation of the lysigenous aerenchyma in rice root. International conference

    Aya Fukazawa, Takaki Yamauchi, Yoshiaki Nagamura, Nobuhiro Tsutsumi, Naoko K Nishizawa, Mikio Nakazono

    11th International Conference on Plant Anaerobiosis  2013.10.10 

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    Event date: 2013.10

    Language:English   Presentation type:Poster presentation  

  32. Involvement of auxin signaling in constitutive aerenchyma formation in rice root. International conference

    Takaki Yamauchi, Hiroki Inahashi, Yoshiaki Nagamura, Naoko K Nishizawa, Yoshiaki Inukai, Mikio Nakazono

    11th International Conference on Plant Anaerobiosis  2013.10.9 

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    Event date: 2013.10

    Language:English   Presentation type:Oral presentation (general)  

  33. Molecular mechanism of aerenchyma formation in plants Invited International coauthorship International conference

    Mikio Nakazono, Takaki Yamauchi, Hirokazu Takahashi, Xiaohua Qi, Asako Yanagawa, Aya Fukazawa, Katsuhiro Shiono, Kiyoaki Kato, Susumu Hiraga, Satoshi Shimamura

    11th International Conference on Plant Anaerobiosis  2013.10.8 

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    Event date: 2013.10

    Language:English   Presentation type:Oral presentation (invited, special)  

  34. Formation of apoplastic barrier to radial oxygen loss (ROL) in rice (Oryza sativa) roots: metabolomic and microarray studies. International conference

    Konstantin Kulichikhin, Takaki Yamauchi, Mikio Nakazono

    11th International Conference on Plant Anaerobiosis  2013.10.7 

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    Event date: 2013.10

    Language:English   Presentation type:Oral presentation (general)  

  35. 組換えコムギの形質評価 1. イネの根で嫌気誘導的に発現する転写因子 EREBP3 遺伝子の導入効果

    川口健太郎, 小柳敦史, 安倍史高, Md. Emdadul Haque, 森正彦, 山内卓樹, 高橋宏和, 間野吉郎, 小原実広, 中園幹生

    第235回日本作物学会講演会  2013.3.28 

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    Event date: 2013.3

    Language:Japanese   Presentation type:Poster presentation  

  36. イネの根の通気組織形成におけるオーキシンの関与

    山内卓樹, 稲橋宏樹, 犬飼義明, 中園幹生

    日本育種学会第123回講演会  2013.3.28 

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    Event date: 2013.3

    Language:Japanese   Presentation type:Oral presentation (general)  

  37. イネの根の誘導的通気組織形成過程における活性酸素種関連遺伝子の発現解析

    深澤彩, 山内卓樹, 長村吉晃, 西澤直子, 堤伸浩, 中園幹生

    第20回育種学会中部地区談話会  2012.12.8 

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    Event date: 2012.12

    Language:Japanese   Presentation type:Poster presentation  

  38. コムギの根における通気組織形成と過湿ストレス耐性の評価

    山内卓樹, 渡邊宏太郎, 高橋宏和, 安倍史高, 川口健太郎, 小柳敦史, 中園幹生

    日本育種学会第122回講演会  2012.9.15 

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    Event date: 2012.9

    Language:Japanese   Presentation type:Oral presentation (general)  

  39. トウモロコシにおける通気組織形成時のエチレン応答性遺伝子の発現解析

    高橋 宏和, 山内 卓樹, Rajhi Imene, 長村 吉晃, 堤 伸浩, 西澤 直子, 中園 幹生

    日本育種学会第122回講演会  2012.9.15 

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    Event date: 2012.9

    Language:Japanese   Presentation type:Oral presentation (general)  

  40. イネの耐湿性に関わる根の誘導的通気組織形成 メカニズムの解析

    山内卓樹, Rajhi Imene, 長村吉晃, 西澤直子, 堤伸浩, 中園幹生

    イネ遺伝学・分子生物学ワークショップ2012  2012.7.5 

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    Event date: 2012.7

    Language:Japanese   Presentation type:Oral presentation (general)  

  41. An approach for the improvement of root aerenchyma formation in wheat by genetic transformation. International conference

    Kentaro Kawaguchi, Fumitaka Abe, Atsushi Oyanagi, Emdadul Haque, Masahiko Mori, Fumie Omori, Yoshiro Mano, Tomomi Abiko, Mitsuhiro Obara, Takaki Yamauchi, Hirokazu Takahashi, Mikio Nakazono

    8th Symposium of the International Society of Root Research  2012.6.28 

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    Event date: 2012.6

    Language:English   Presentation type:Poster presentation  

  42. テオシントとイネの根の通気組織形成候補遺伝子を導入した コムギの作出と形質の評価

    森正彦, モハマド・ハック, 安倍史高, 川口健太郎, 小柳敦史, 大森史恵, 間野吉郎, 山内卓樹, 中園幹生, 安彦友美, 小原実広

    第36回根研究集会  2012.6.15 

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    Event date: 2012.6

    Language:Japanese   Presentation type:Oral presentation (general)  

  43. 根の通気組織形成能が低下したイネrcn1変異体におけるエチレン生合成.

    山内卓樹, 塩野克宏, 高牟禮逸朗, 森仁志, 堤伸浩, 加藤清明, 中園幹生

    日本育種学会第121回講演会  2012.3.30 

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    Event date: 2012.3

    Language:Japanese   Presentation type:Oral presentation (general)  

  44. ストリゴラクトンとサイトカイニンの拮抗作用によるイネのメソコチル伸長制御.

    胡仲遠, 山内卓樹, 楊景華, 軸丸裕介, 槌田(間山)智子, 市川裕章, 張明方, 高牟禮逸郎, 長村吉晃, 堤伸浩, 山口信次郎, 経塚淳子, 中園幹生

    日本育種学会第121回講演会  2012.3.29 

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    Event date: 2012.3

    Language:Japanese   Presentation type:Oral presentation (general)  

  45. Study of aerenchyma formation in maize roots during waterlogged conditions. International coauthorship International conference

    Imene Rajhi, Takaki Yamauchi, Hirokazu Takahashi, Shunsaku Nishiuchi, Katsuhiro Shiono, Ryosuke Watanabe, Ahmed Mliki, Yoshiaki Nagamura, Nobuhiro Tsutsumi, Naoko K Nishizawa, Mikiio Nakazono

    The 10th Tunisia-Japan Symposium on Society, Science and Technology  2011.11.11 

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    Event date: 2011.11

    Language:English   Presentation type:Poster presentation  

  46. Studies on molecular mechanism of formations of aerenchyma and a barrier to radial oxygen loss in crops under waterlogged conditions. Invited International conference

    Mikio Nakazono, Takaki Yamauchi, Imene Rajhi, Tomomi Abiko, Shunsaku Nishiuchi, So Yamazaki, Katsuhiro Shiono

    The 7th ACSA (Asian Crop Science Association) Conference  2011.9.27 

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    Event date: 2011.9

    Language:English   Presentation type:Oral presentation (general)  

  47. rcn1変異体を用いたイネの根の通気組織形成遺伝子の発現解析

    山内卓樹, 塩野克宏, 高牟禮逸朗, 長村吉晃, 堤伸浩, 西澤直子, 加藤清明, 中園幹生

    日本育種学会第120回講演会  2011.9.24 

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    Event date: 2011.9

    Language:Japanese   Presentation type:Poster presentation  

  48. イネのスベリン生合成経路に関与するNAM型転写因子の機能解析.

    西内俊策, 渡邊宏太郎, 山内卓樹, 高橋宏和, 塩野克宏, 槌田(間山)智子, 光田展隆, 高木優, 市川裕章, 中園幹生

    日本育種学会第120回講演会  2011.9.24 

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    Event date: 2011.9

    Language:Japanese   Presentation type:Oral presentation (general)  

  49. トウモロコシの通気組織形成に関与するエチレン応答性遺伝子の探索.

    高橋宏和, 山内卓樹, Imene Rajhi, 長村吉晃, 堤伸浩, 西澤直子, 中園幹生

    日本育種学会第120回講演会  2011.9.24 

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    Event date: 2011.9

    Language:Japanese   Presentation type:Oral presentation (general)  

  50. Genes involved in inducible aerenchyma formation in rice roots. International conference

    Mikio Nakazono, Takaki Yamauchi, Kiyoaki Kato

    7th International Symposium on Function and Structure of Roots  2011.9.6 

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    Event date: 2011.9

    Language:English   Presentation type:Oral presentation (invited, special)  

  51. High-resolution gene expression profiling in rice root. International conference

    Hinako Takehisa, Igarashi M, Yutaka Sato, Tomom Abiko, Takaki Yamauchi, Baltazar A Antonio, Ritsuko Motoyama

    International botanical congress (IBC) 2011  2011.7.23 

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    Event date: 2011.7

    Language:English   Presentation type:Poster presentation  

  52. Identification of genes expressed in maize root cortical cells during lysigenous aerenchyma formation. International coauthorship

    Imene Rajhi, Takaki Yamauchi, Hirokazu Takahashi, Shunsaku Nishiuchi, Katsuhiro Shiono, Ryosuke Watanabe, Ahmed Mliki, Yoshiaki Nagamura, Nobuhiro Tsutsumi, Naoko K Nishizawa, Mikiio Nakazono

    2011.3.30 

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    Event date: 2011.3

    Language:English   Presentation type:Oral presentation (general)  

  53. マイクロアレイ解析を用いたイネの根の通気組織形成メカニズムの解明.

    山内卓樹, 塩野克宏, 安彦友美, Rajhi Imene, 長村吉晃, 堤伸浩, 中園幹生

    日本育種学会第119回講演会  2011.3.30 

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    Event date: 2011.3

    Language:Japanese   Presentation type:Oral presentation (general)  

  54. イネの根における網羅的遺伝子発現プロファイリング

    竹久妃奈子, 五十嵐元子, 佐藤豊, 安彦友美, 山内卓樹, Antonio B, 本山立子, 犬飼義明, 中園幹生, 長村吉晃

    第52回日本植物生理学会年会  2011.3.22 

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    Event date: 2011.3

    Language:Japanese   Presentation type:Poster presentation  

  55. Identification of genes expressed in maize root cortical cells during lysigenous aerenchyma formation. International coauthorship

    Imene Rajhi, Takaki Yamauchi, Hirokazu Takahashi, Shunsaku Nishiuchi, Katsuhiro Shiono, Ryosuke Watanabe, Ahmed Mliki, Yoshiaki Nagamura, Nobuhiro Tsutsumi, Naoko K Nishizawa, Mikiio Nakazono

    2010.12.7 

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    Event date: 2010.12

    Language:English   Presentation type:Poster presentation  

  56. マイクロアレイによるイネの根の通気組織形成メカニズムの解明.

    山内卓樹, 塩野克宏, 安彦友美, Rajhi Imene, 高牟禮逸朗, 長村吉晃, 堤伸浩, 加藤清明, 中園幹生

    農研機構シンポジウム 「麦・大豆栽培における湿害の現実と研究展開」  2010.12.7 

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    Event date: 2010.12

    Language:Japanese   Presentation type:Poster presentation  

  57. Laser capture microdissection (LCM)を用いたイネの根の遺伝子発現プロファイルリング.

    竹久妃奈子, 五十嵐元子, 佐藤豊, 安彦友美, 山内卓樹, Antonio Baltazar, 本山立子, 犬飼義明, 中園幹生, 長村吉晃

    第33回根研究集会  2010.11.12 

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    Event date: 2010.11

    Language:Japanese   Presentation type:Poster presentation  

  58. マイクロアレイによるイネの根の通気組織形成に関わる分子機構の解析.

    山内卓樹, 塩野克宏, 安彦友美, Rajhi Imene, 高牟禮逸朗, 長村吉晃, 堤伸浩, 加藤清明, 中園幹生

    日本育種学会第118回講演会  2010.9.25 

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    Event date: 2010.9

    Language:Japanese   Presentation type:Oral presentation (general)  

  59. 作物の耐湿性に寄与する根の構造および根系. Invited

    中園幹生, 塩野克宏, 安彦友美, 山内卓樹, 間野吉郎, 小柳敦史, 川口健太郎, 安倍史高

    日本育種学会118回講演会  2010.9.24 

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    Event date: 2010.9

    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

  60. Global expression analysis of genes related to inducible aerenchyma formation in rice roots. International conference

    Takaki Yamauchi, Katsuhiro Shiono, Tomomi Abiko, Imene Rajhi, Itsuro Takamure, Yoshiaki Nagamura, Nobuhiro Tsutsumi, Mikio Nakazono, Kiyoaki Kato

    10th International Conference on Plant Anaerobiosis  2010.7.23 

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    Event date: 2010.7

    Language:English   Presentation type:Poster presentation  

  61. Identification of genes expressed during aerenchyma formation in maize and rice roots. Invited International conference

    Mikio Nakazono, Takaki Yamauchi, Imene Rajhi, Tomomi Abiko, Nobuhiro Tsutsumi, Kiyoaki Kato, Yoshiaki Nagamura, Naoko K Nishizawa

    10th International Conference on Plant Anaerobiosis,  2010.7.21 

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    Event date: 2010.7

    Language:English   Presentation type:Oral presentation (invited, special)  

  62. イネの根における誘導的通気組織形成に関与する遺伝子の網羅的発現解析.

    山内卓樹, 塩野克宏, 安彦友美, Rajhi Imene, 高牟礼逸朗, 長村吉晃, 堤伸浩, 中園幹生, 加藤清明

    第32回根研究集会  2010.4.20 

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    Event date: 2010.4

    Language:Japanese   Presentation type:Poster presentation  

  63. 陸稲を含むイネ遺伝資源を利用した耐湿性及び通気組織形成能の変異の探索.

    安彦友美, 安倍史高, 山内卓樹, 川口健太郎, 小柳敦史, 中園幹生

    第229回日本作物学会講演会  2010.3.30 

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    Event date: 2010.3

    Language:Japanese   Presentation type:Poster presentation  

  64. イネの根における誘導的通気組織形成に関与する遺伝子の網羅的発現解析.

    山内卓樹, 塩野克宏, 安彦友美, Rajhi Imene, 高牟礼逸朗, 長村吉晃, 堤伸浩, 中園幹生, 加藤清明

    日本育種学会117回講演会  2010.3.27 

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    Event date: 2010.3

    Language:Japanese   Presentation type:Poster presentation  

  65. イネの根の誘導的通気組織形成におけるエチレンの関与.

    山内卓樹, 塩野克宏, 安彦友美, Rajhi Imene, 高牟礼逸朗, 堤伸浩, 中園幹生, 加藤清明

    第31回根研究集会  2009.11.21 

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    Event date: 2009.11

    Language:Japanese   Presentation type:Oral presentation (general)  

  66. イネの誘導的通気組織形成に関わる分子機構の解析.

    山内卓樹, 塩野克宏, 安彦友美, Rajhi Imene, 高牟礼逸朗, 堤伸浩, 中園幹生, 加藤清明

    日本育種学会第116回講演会  2009.9.25 

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    Event date: 2009.9

    Language:Japanese   Presentation type:Oral presentation (general)  

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Research Project for Joint Research, Competitive Funding, etc. 1

  1. Analysis of molecular basis for root plasticity responsible for plant adaptation to climate change

    Grant number:JPMJPR17Q8  2017.9

    Japan Science and Technology Agency  PRESTO 

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    Authorship:Principal investigator  Grant type:Competitive

KAKENHI (Grants-in-Aid for Scientific Research) 2

  1. Establishment of genetic modification technology using endogenous mobile elements of cereal crops

    Grant number:19K05966  2019.4 - 2022.3

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\4420000 ( Direct Cost: \3400000 、 Indirect Cost:\1020000 )

  2. イネ科植物の耐湿性に関わる通気組織形成メカニズムの解明

    Grant number:12J05119  2012.4 - 2015.3

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\4290000 ( Direct Cost: \3300000 、 Indirect Cost:\990000 )

    植物体内に形成される気体の通り道である通気組織は、耐湿性に関わる重要な形質であり、土壌中の酸素濃度が低下した低酸素状態において、地上部から根端部への酸素供給に寄与している。このことから、農業上重要な穀物を多く含むイネ科作物において、通気組織形成メカニズムを解明することが期待されている。イネの根の通気組織は好気的環境において根の成長に伴い形成される恒常的通気組織と過湿環境に応答して形成される誘導的通気組織に分類される。本年度は、誘導的通気組織形成過程において活性酸素種の発生を担う酵素であるrespiratory burst oxidase homolog (RBOH) をコードする遺伝子のAntisense鎖を発現させた形質転換体を作出し、一部の系統においてRBOH遺伝子の発現抑制がみられることを明らかにした。また、カルシウムを除いた生育条件(低酸素条件)においてイネの根の誘導的通気組織形成が抑制されることを明らかにし、RBOHの活性がcalcium dependent protein kinase(CDPK)によって活性化される可能性を見出した。さらに、イネの根の誘導的通気組織形成過程に特異的に発現誘導されるCDPK遺伝子を同定した。一方、イネなどの耐湿性の高いイネ科植物にしかみられない恒常的通気組織形成は過湿環境への適応において非常に重要である。本年度は、オーキシンシグナル伝達に異常のみられるイネの変異体の根では好気的な条件においても通気組織形成能の低下がみられることを示した。このことから、植物ホルモンのオーキシンが恒常的通気組織形成に関わることが示唆された。今後、恒常的通気組織形成の分子機構をさらに詳細に明らかにし、イネ科畑作物の根に恒常的通気組織形成能を賦与することができれば、将来的にはイネ科畑作物の耐湿性の向上に貢献すると期待している。
    26年度が最終年度であるため、記入しない。
    26年度が最終年度であるため、記入しない。

Industrial property rights 2

  1. 高効率変異導入法

    飯田 滋, 寺田 理枝, 定塚 恵世, 山内 卓樹

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    Applicant:大学共同利用機関法人自然科学研究機構

    Application no:特願2008-063405  Date applied:2008.3

    Announcement no:特開2008-253254  Date announced:2008.10

    J-GLOBAL

  2. 高等植物のプロモーター活性の解析用ベクター及びその利用方法

    飯田 滋, 寺田 理枝, 定塚 恵世, 山内 卓樹

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    Applicant:大学共同利用機関法人自然科学研究機構

    Application no:JP2007071085  Date applied:2007.10

    Announcement no:WO2008-059711  Date announced:2008.5

    J-GLOBAL

 

Teaching Experience (Off-campus) 1

  1. 細胞生物学(非常勤講師)

    東京大学農学部)

 

Media Coverage 2

  1. 冠水でも成長するイネの仕組み解明 Newspaper, magazine

    毎日新聞社  毎日新聞(朝刊)  2019.10

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    Author:Other 

  2. 日本農学進歩賞受賞者の研究概要 Newspaper, magazine

    一般社団法人 農協協会  JAcom 農業協同組合新聞  2019.11

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    Author:Other