2023/04/10 更新

写真a

ウ ディ
呉 迪
WU Di
所属
糖鎖生命コア研究所 統合生命医科学糖鎖研究センター 細胞・個体制御部門 助教
生物機能開発利用研究センター 助教
大学院担当
大学院生命農学研究科
職名
助教
連絡先
メールアドレス
外部リンク

学位 1

  1. 博士(農学) ( 2017年3月   名古屋大学 ) 

 

論文 10

  1. Forced expression of a2,3-sialyltransferase IV rescues impaired heart development in a2,6-sialyltransferase I-deficient medaka

    Omoto Takayuki, Wu Di, Maruyama Emi, Tajima Katsue, Hane Masaya, Sato Chihiro, Kitajima Ken

    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS   649 巻   頁: 62 - 70   2023年3月

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    記述言語:英語   出版者・発行元:Biochemical and Biophysical Research Communications  

    Sialic acids (Sias) are often linked to galactose (Gal) residues by α2,6- and α2,3-linkages in glycans of glycoproteins. Sias are indispensable for vertebrate development, because organisms deficient in some enzymes in the Sia synthetic pathway are lethal during the development. However, it remains unknown if the difference of Siaα2,6Gal or α2,3Gal linkage has a critical meaning. To find a clue to understand significance of the linkage difference at the organism level, medaka was used as a vertebrate model. In embryos, Siaα2,6Gal epitopes recognized by Sambucus nigra lectin (SNA) and Siaα2,3Gal epitopes recognized by Maackia amurensis lectin (MAA) were enriched in the blastodisc and the yolk sphere, respectively. When these lectins were injected in the perivitelline space, SNA, but not MAA, impaired embryo body formation at 1 day post-fertilization (dpf). Most Siaα2,6Gal epitopes occurred on N-glycans owing to their sensitivity to peptide:N-glycanase. Of knockout-medaka (KO) for either of two β-galactoside:α2,6-sialyltransferase genes, ST6Gal I and ST6Gal II, only ST6Gal I–KO showed severe cardiac abnormalities at 7–16 dpf, leading to lethality at 14–18 dpf. Interestingly, however, these cardiac abnormalities of ST6Gal I–KO were rescued not only by forced expression of ST6Gal I, but also by that of ST6Gal II and the β-galactoside:α2,3-sialyltransferase IV gene (ST3Gal IV). Taken together, the Siaα2,6Gal linkage synthesized by ST6Gal I are critical in heart development; however, it can be replaced by the linkages synthesized by ST6Gal II and ST3Gal IV. These data suggest that sialylation itself is more important than its particular linkage for the heart development.

    DOI: 10.1016/j.bbrc.2023.01.010

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  2. Critical Role of the Cortical Alveolus Protease Alveolin in Chorion Hardening In Vivo at Medaka Fertilization

    Fu Bo, Wu Di, Yasumasu Shigeki, Hane Masaya, Sato Chihiro, Kitajima Ken

    BIOMOLECULES   13 巻 ( 1 )   2023年1月

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    記述言語:英語   出版者・発行元:Biomolecules  

    Alveolin is a cortical alveolus proteinase that is secreted in the perivitelline space (PVS) at fertilization to act on the chorion. Purified alveolin is known to induce chorion hardening in vitro by processing zona pellucida B (ZPB), a major chorion component. However, in vivo function of alveolin remains unclear; thus, in this study, the effects of alveolin efficiency (Alv−/−) at the organism level were investigated using the medaka, Oryzias latipes. The Alv−/− fertilized eggs were mechanically fragile; however, they developed normally and left offspring as long as they were carefully handled before hatching. A mechanical press test showed that the Alv−/− fertilized eggs were six times more fragile than the wild-type eggs. They were 35% larger owing to the enlarged PVS, 34% thinner, and permeable to even 10 kDa FITC-dextran. These results are consistent with the transmission electron microscopy observation that the periphery of the inner layers was highly porous in the Alv−/− chorion. In chorion hardening, the alveolin-mediated processing of ZPB and the transglutaminase (TGase)-mediated crosslinking of chorion components are the key steps. This study was the first to show that alveolin also processed TGase concomitantly with ZPB, which greatly facilitated the crosslinking. Thus, alveolin was concluded to be the primary trigger for chorion hardening in vivo. Furthermore, fertilization in a balanced salt solution could partially improve the impaired chorion hardening of the Alv−/− eggs fertilized in water, probably through an alveolin-independent mechanism.

    DOI: 10.3390/biom13010146

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  3. Identification and characterization of a deaminoneuraminic acid (Kdn)-specific aldolase from Sphingobacterium species

    Nakagawa Takahiro, Iwaki Yuya, Wu Di, Hane Masaya, Sato Chihiro, Kitajima Ken

    GLYCOBIOLOGY   33 巻 ( 1 ) 頁: 47 - 56   2022年8月

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    記述言語:英語   出版者・発行元:Glycobiology  

    Sialic acid (Sia) is a group of acidic sugars with a 9-carbon backbone, and classified into 3 species based on the substituent group at C5 position: N-acetylneuraminic acid (Neu5Ac), N-glycolylneuraminic acid (Neu5Gc), and deaminoneuraminic acid (Kdn). In Escherichia coli, the sialate aldolase or N-acetylneuraminate aldolase (NanA) is known to catabolize these Sia species into pyruvate and the corresponding 6-carbon mannose derivatives. However, in bacteria, very little is known about the catabolism of Kdn, compared with Neu5Ac. In this study, we found a novel Kdn-specific aldolase (Kdn-aldolase), which can exclusively degrade Kdn, but not Neu5Ac or Neu5Gc, from Sphingobacterium sp., which was previously isolated from a Kdn-assimilating bacterium. Kdn-aldolase had the optimal pH and temperature at 7.0-8.0 and 50 °C, respectively. It also had the synthetic activity of Kdn from pyruvate and mannose. Site-specific mutagenesis revealed that N50 residue was important for the Kdn-specific reaction. Existence of the Kdn-aldolase suggests that Kdn-specific metabolism may play a specialized role in some bacteria.

    DOI: 10.1093/glycob/cwac053

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  4. A novel C-domain-dependent inhibition of the rainbow trout CMP- sialic acid synthetase activity by CMP-deaminoneuraminic acid

    Wu Di, Gilormini Pierre-Andre, Toda Sakura, Biot Christophe, Lion Cedric, Guerardel Yann, Sato Chihiro, Kitajima Ken

    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS   617 巻 ( Pt 1 ) 頁: 16 - 21   2022年8月

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    記述言語:英語   出版者・発行元:Biochemical and Biophysical Research Communications  

    The CMP-sialic acid synthetase (CSS) activates free sialic acid (Sia) to CMP-Sia using CTP, and is prerequisite for the sialylation of cell surface glycoconjugates. The vertebrate CSS consists of two domains, a catalytic N-domain and a non-catalytic C-domain. Although the C-domain is not required for the CSS enzyme to synthesize CMP-Sia, its involvement in the catalytic activity remains unknown. First, the real-time monitoring of CSS-catalyzed reaction was performed by 31P NMR using the rainbow trout CSS (rtCSS). While a rtCSS lacking the C-domain (rtCSS-N) similarly activated both deaminoneuraminic acid (Kdn) and N-acetylneuraminic acid (Neu5Ac), the full-length rtCSS (rtCSS-FL) did not activate Kdn as efficiently as Neu5Ac. These results suggest that the C-domain of rtCSS affects the enzymatic activity, when Kdn was used as a substrate. Second, the enzymatic activity of rtCSS-FL and rtCSS-N was measured under various concentrations of CMP-Kdn. Inhibition by CMP-Kdn was observed only for rtCSS-FL, but not for rtCSS-N, suggesting that the inhibition was C-domain-dependent. Third, the inhibitory effect of CMP-Kdn was also investigated using the mouse CSS (mCSS). However, no inhibition was observed with mCSS even at high concentrations of CMP-Kdn. Taken together, the data demonstrated that the C-domain is involved in the CMP-Kdn-dependent inhibition of rtCSS, which is a novel regulation of the Sia metabolism in rainbow trout.

    DOI: 10.1016/j.bbrc.2022.05.031

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  5. Sulfation of sialic acid is ubiquitous and essential for vertebrate development

    Ertunc Nursah, Phitak Thanyaluck, Wu Di, Fujita Hiroshi, Hane Masaya, Sato Chihiro, Kitajima Ken

    SCIENTIFIC REPORTS   12 巻 ( 1 ) 頁: 12496   2022年7月

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    記述言語:英語   出版者・発行元:Scientific Reports  

    Glycosylation of proteins and lipids occurs in vertebrates, usually terminating with sialylation, which regulates the physicochemical and biological properties of these glycoconjugates. Although less commonly known, sialic acid residues also undergo various modifications, such as acetylation, methylation, and sulfation. However, except for acetylation, the enzymes or functions of the other modification processes are unknown. To the best of our knowledge, this study is the first to demonstrate the ubiquitous occurrence of sulfated sialic acids and two genes encoding the sialate: O-sulfotransferases 1 and 2 in vertebrates. These two enzymes showed about 50% amino acid sequence identity, and appeared to be complementary to each other in acceptor substrate preferences. Gene targeting experiments showed that the deficiency of these genes was lethal for medaka fish during young fry development and accompanied by different phenotypes. Thus, the sulfation of sialic acids is essential for the vertebrate development.

    DOI: 10.1038/s41598-022-15143-4

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  6. The alpha 2,8-sialyltransferase 6 (St8sia6) localizes in the ER and enhances the anchorage-independent cell growth in cancer

    Hatanaka Rina, Araki Erino, Hane Masaya, Go Shiori, Wu Di, Kitajima Ken, Sato Chihiro

    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS   608 巻   頁: 52 - 58   2022年6月

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    記述言語:英語   出版者・発行元:Biochemical and Biophysical Research Communications  

    Sialylation, the final stage of post-translational modification of proteins, is achieved in the Golgi apparatus and is related to the malignant phenotype of cancer. Disialylation of ganglioside (GD3) by St8sia1 and polysialylation by St8sia2 and 4 have been shown to be related to malignant phenotypes; however, di/oligosialylation by St8sia6 is still unknown. In this study, we analyzed the malignant phenotype of St8sia6 and found that upregulation of St8sia6 in melanoma B16 cells increased anchorage-independent cell growth, which was not due to sialic acid cleavage by a sialidase. Moreover, unlike other sialyltransferases, St8sia6 localized to the endoplasmic reticulum (ER). We found that the localization to the Golgi apparatus could be regulated by swapping experiments using St8sia2; however, the malignant phenotype did not change. These data demonstrate that the enhancement of anchorage-independent cell growth by St8sia6 is not due to its localization of ER, but is due to the expression of the protein itself.

    DOI: 10.1016/j.bbrc.2022.03.146

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  7. Polysialylation in a DISC1 Mutant Mouse

    Takahashi Yuka, Abe Chikara, Hane Masaya, Wu Di, Kitajima Ken, Sato Chihiro

    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES   23 巻 ( 9 )   2022年5月

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    記述言語:英語   出版者・発行元:International Journal of Molecular Sciences  

    Schizophrenia is a serious psychiatric disorder that affects the social life of patients. Psychiatric disorders are caused by a complex combination of genetic (G) and environmental (E) factors. Polysialylation represents a unique posttranslational modification of a protein, and such changes in neural cell adhesion molecules (NCAMs) have been reported in postmortem brains from patients with psychiatric disorders. To understand the G × E effect on polysialylated NCAM expression, in this study, we performed precise measurements of polySia and NCAM using a disrupted-in-schizophrenia 1 (DISC1)-mutant mouse (G), a mouse model of schizophrenia, under acute stress conditions (E). This is the first study to reveal a lower number and smaller length of polySia in the suprachiasmatic nucleus of DISC1 mutants relative to those in wild-type (WT) mice. In addition, an analysis of polySia and NCAM responses to acute stress in five brain regions (olfactory bulb, prefrontal cortex, suprachiasmatic nucleus, amygdala, and hippocampus) revealed that the pattern of changes in these responses in WT mice and DISC1 mutants differed by region. These differences could indicate the vulnerability of DISC1 mutants to stress.

    DOI: 10.3390/ijms23095207

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  8. A point-mutation in the C-domain of CMP-sialic acid synthetase leads to lethality of medaka due to protein insolubility

    Wu Di, Arakawa Hiromu, Fujita Akiko, Hashimoto Hisashi, Hibi Masahiko, Naruse Kiyoshi, Kamei Yasuhiro, Sato Chihiro, Kitajima Ken

    SCIENTIFIC REPORTS   11 巻 ( 1 ) 頁: 23211   2021年12月

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    記述言語:英語   出版者・発行元:Scientific Reports  

    Vertebrate CMP-sialic acid synthetase (CSS), which catalyzes the synthesis of CMP-sialic acid (CMP-Sia), consists of a 28 kDa-N-domain and a 20 kDa-C-domain. The N-domain is known to be a catalytic domain; however, the significance of the C-domain still remains unknown. To elucidate the function of the C-domain at the organism level, we screened the medaka TILLING library and obtained medaka with non-synonymous mutations (t911a), or single amino acid substitutions of CSS, L304Q, in the C-domain. Prominently, most L304Q medaka was lethal within 19 days post-fertilization (dpf). L304Q young fry displayed free Sia accumulation, and impairment of sialylation, up to 8 dpf. At 8 dpf, a marked abnormality in ventricular contraction and skeletal myogenesis was observed. To gain insight into the mechanism of L304Q-induced abnormalities, L304Q was biochemically characterized. Although bacterially expressed soluble L304Q and WT showed the similar Vmax/Km values, very few soluble L304Q was detected when expressed in CHO cells in sharp contrast to the WT. Additionally, the thermostability of various mutations of L304 greatly decreased, except for WT and L304I. These results suggest that L304 is important for the stability of CSS, and that an appropriate level of expression of soluble CSS is significant for animal survival.

    DOI: 10.1038/s41598-021-01715-3

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  9. Diverse subcellular localizations of the insect CMP-sialic acid synthetases 招待有り 査読有り

    Di W, Fujita A, Hamaguchi K, Delannoy P, Sato C, Kitajima K.

    Glycobiology.     2017年4月

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  10. Diverse subcellular localizations of the insect CMP-sialic acid synthetases.

    Di W, Fujita A, Hamaguchi K, Delannoy P, Sato C, Kitajima K

    Glycobiology   27 巻 ( 4 ) 頁: 329 - 341   2017年4月

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    記述言語:英語  

    DOI: 10.1093/glycob/cww128

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科研費 1

  1. Demonstration of the vertebrate CMP-sialic acid synthetase as a novel regulatory protein of neural cell apoptosis

    研究課題/研究課題番号:21K15040  2021年4月 - 2023年3月

    科学研究費助成事業  若手研究

    呉 迪

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    担当区分:研究代表者 

    配分額:4680000円 ( 直接経費:3600000円 、 間接経費:1080000円 )

    CMP-sialic acid synthetase (CSS) is a key enzyme for the expression of Sia-Glycolconjugates on the cell surface. Our previous results suggest that CSS plays a critical role in neurogenesis, not only as a sialylation-involved enzyme but also as an apoptosis-related protein. To clarify how CSS regulates the neural cell apoptosis: (1) To identify protein X by the proximity labeling technique; (2) To characterize the interaction between protein X and CSS at the molecular level; (3) To clarify the significance of the protein X-CSS interaction at the animal level using medaka model.
    CMP-sialic acid synthetase (CSS) is a key enzyme for the expression of sialic acid (Sia)-containing
    glycoconjugates on the cell surface. N-domain of CSS is catalytic domain, which contained the active site and 5 conserved motifs; however, medaka with a point mutation in the N-domain of CSS (named MuN) was lethal at early developmental stage due to neural cell apoptosis without affecting the sialylation state. These results suggest that CSS plays a critical role in neurogenesis, not only as a sialylation-involved enzyme but also as an apoptosis related protein. To clarify how CSS regulates the neural cell apoptosis, focusing on proteins that interact with CSS in neural system, I executed the following experiments: (1) To determine the protein, which is interacted with mouse CSS (mCSS) in mouse neuroblastoma cell line Neuro2A, the proximity labeling technique (Turbo ID) were used. As a result, mCSS was interacted with various proteins in Neuro2A cell and one of them is Fragile X related protein (FXRP). The interaction of mCSS and FXRP was confirmed by immunoprecipitation experiments. (2) To characterize the interaction between FXRP and CSS at the molecular level, the interaction of FXRP with wild-type, MuN CSS and R188H CSS (mutation found from patients of intellectual disability) were confirmed in Neuro2A cells. However, the interaction with FXRP was not significantly different between wild-type CSS and mutant CSSs. (3) To clarify the significance of the CSS and FXRP interaction at the animal level, the neurogenesis and the heart development of MuN medaka were observed.
    This project is progressing more smoothly than initially planned because of the following reasons:
    (1)The proximity labeling experiment for the first time confirmed that various proteins interacted with CSS in Neuro2A cell. The interaction with FXRP was confirmed by the immunoprecipitation experiment, indicating that the interaction of FXRP and CSS possibly plays important role in neural development and myogenesis, because FXRP is known to mediate transport of specific mRNAs to different intracellular compartments and inhibit translation of their target mRNAs,
    (2)The interaction of FXRP with MuN and R188H mutant CSS was compared with that with wild-type CSS using proximity labeling and immunoprecipitation. Since no obvious difference was observed between wild-type CSS and mutant CSSs in Neuro2A cells, the interaction should be confirmed at the animal level.
    (3)Our previous study showed that MuN mutant induced apoptosis in telencephalon and optic tectum of brain in medaka. To confirmed whether the apoptosis in MuN medaka was induced by ER stress, the CCAAT-enhancer-binding protein homologous protein (CHOP) expression was quantified by real-time PCR. Since the expression of CHOP was obviously increased in MuN medaka at 8 dpf, it can be concluded that MuN mutant-induced ER stress results in apoptosis at the animal level. Furthermore, the heart development of MuN medaka was observed from 0 to 8 dpf to confirm the reason for lethality. As a result, the abnormal heart development was observed in MuN medaka, which is the similar phenotype to that of FXRP knock-down zebrafish.
    The following experiments should be executed:
    (1)Not only FXRP but also other candidates of interacting proteins of CSS were confirmed by proximity labeling technique. It is necessary to confirm all the interacting proteins by mass spectrometric analysis (MS) for further study. Furthermore, the important domain for the interaction of CSS protein will be determined by the chimeras technique.
    (2)To confirm the difference of the interaction with FXRP between wild-type CSS and MuN CSS at the animal level, firstly, the expression profiles of CSS and MuN CSS during neurogenesis are established by live imaging using knock-in technique; Secondly, the FXRP expression in MuN medaka and wild-type medaka are quantified and compared by the real-time PCR method or in situ technique; thirdly, the interaction differences between wild-type CSS and MuN CSS are confirmed at the animal level by affinity-purification and western blotting using specific antibody.
    (3)To clarify the significance of the interaction between FXRP and CSS during neurogenesis and myogenesis at animal level, the neural system-specific and muscle-specific CSS-KO medaka strain will be generated using CRISPR/Cas9 nickase-mediated knock-in technique.