-
Sequence Divergence and Retrotransposon Insertion Underlie Interspecific Epigenetic Differences in Primates
Hirata Mayu, Ichiyanagi Tomoko, Katoh Hirokazu, Hashimoto Takuma, Suzuki Hikaru, Nitta Hirohisa, Kawase Masaki, Nakai Risako, Imamura Masanori, Ichiyanagi Kenji
MOLECULAR BIOLOGY AND EVOLUTION
39
巻
(
10
)
2022年10月
-
The Expression Dynamics of piRNAs Derived From Male Germline piRNA Clusters and Retrotransposons
Kawase Masaki, Ichiyanagi Kenji
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
10
巻
頁：
868746
2022年5月
-
Potential role of KRAB-ZFP binding and transcriptional states on DNA methylation of retroelements in human male germ cells
Fukuda Kei, Makino Yoshinori, Kaneko Satoru, Shimura Chikako, Okada Yuki, Ichiyanagi Kenji, Shinkai Yoichi
ELIFE
11
巻
2022年3月
-
The regulatory mechanisms that make mature sperm cells in the mouse
Ichiyanagi Kenji
GENES & GENETIC SYSTEMS
97
巻
(
1
)
頁：
1
-
1
2022年2月
-
The fifth Japanese meeting on biological function and evolution through interactions between hosts and transposable elements
Ichiyanagi Kenji, Saito Kuniaki
MOBILE DNA
13
巻
(
1
)
頁：
3
2022年1月
-
TFB2M and POLRMT are essential for mammalian mitochondrial DNA replication
Inatomi Teppei, Matsuda Shigeru, Ishiuchi Takashi, Do Yura, Nakayama Masunari, Abe Shusaku, Kasho Kazutoshi, Wanrooij Sjoerd, Nakada Kazuto, Ichiyanagi Kenji, Sasaki Hiroyuki, Yasukawa Takehiro, Kang Dongchon
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH
1869
巻
(
1
)
頁：
119167
2022年1月
-
Quantitative Separation of Precipitation and Permafrost Waters Used for Evapotranspiration in a Boreal Forest: A Numerical Study Using Tracer Model
Park Hotaek, Tanoue Masahiro, Sugimoto Atsuko, Ichiyanagi Kimpei, Iwahana Go, Hiyama Tetsuya
JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES
126
巻
(
12
)
2021年12月
-
melRNA-seq for Expression Analysis of SINE RNAs and Other Medium-Length Non-Coding RNAs
Mori Yoshinobu, Ichiyanagi Kenji
MOBILE DNA
12
巻
(
1
)
頁：
15
2021年6月
-
B2 SINE Copies Serve as a Transposable Boundary of DNA Methylation and histone Modifications in the Mouse
Ichiyanagi Tomoko, Katoh Hirokazu, Mori Yoshinobu, Hirafuku Keigo, Boyboy Beverly Ann, Kawase Masaki, Ichiyanagi Kenji
MOLECULAR BIOLOGY AND EVOLUTION
38
巻
(
6
)
頁：
2380
-
2395
2021年6月
-
Dispersal history of Miniopterus fuliginosus bats and their associated viruses in east Asia
Kimprasit Thachawech, Nunome Mitsuo, Iida Keisuke, Murakami Yoshitaka, Wong Min-Liang, Wu Chung-Hsin, Kobayashi Ryosuke, Hengjan Yupadee, Takemae Hitoshi, Yonemitsu Kenzo, Kuwata Ryusei, Shimoda Hiroshi, Si Lifan, Sohn Joon-Hyuk, Asakawa Susumu, Ichiyanagi Kenji, Maeda Ken, Oh Hong-Shik, Mizutani Tetsuya, Kimura Junpei, Iida Atsuo, Hondo Eiichi
PLOS ONE
16
巻
(
1
)
頁：
e0244006
2021年1月
-
Combined deletions of IHH and NHEJ1 cause chondrodystrophy and embryonic lethality in the Creeper chicken
Kinoshita Keiji, Suzuki Takayuki, Koike Manabu, Nishida Chizuko, Koike Aki, Nunome Mitsuo, Uemura Takeo, Ichiyanagi Kenji, Matsuda Yoichi
COMMUNICATIONS BIOLOGY
3
巻
(
1
)
頁：
144
2020年3月
-
Non-transmissible MV Vector with Segmented RNA Genome Establishes Different Types of iPSCs from Hematopoietic Cells
Hiramoto Takafumi, Tahara Maino, Liao Jiyuan, Soda Yasushi, Miura Yoshie, Kurita Ryo, Hamana Hiroshi, Inoue Kota, Kohara Hiroshi, Miyamoto Shohei, Hijikata Yasuki, Okano Shinji, Yamaguchi Yoshiyuki, Oda Yoshinao, Ichiyanagi Kenji, Toh Hidehiro, Sasaki Hiroyuki, Kishi Hiroyuki, Ryo Akihide, Muraguchi Atsushi, Takeda Makoto, Tani Kenzaburo
MOLECULAR THERAPY
28
巻
(
1
)
頁：
129
-
141
2020年1月
-
Characterization of genetic-origin-dependent monoallelic expression in mouse embryonic stem cells
Ohishi Hiroaki, Yeung Wan Kin Au, Unoki Motoko, Ichiyanagi Kenji, Fukuda Kei, Maenohara Shoji, Shirane Kenjiro, Chiba Hatsune, Sado Takashi, Sasaki Hiroyuki
GENES TO CELLS
25
巻
(
1
)
頁：
54
-
64
2020年1月
-
Selective Reduction Mechanism of Graphene Oxide Driven by the Photon Mode versus the Thermal Mode
Hada Masaki, Miyata Kiyoshi, Ohmura Satoshi, Arashida Yusuke, Ichiyanagi Kohei, Katayama Ikufumi, Suzuki Takayuki, Chen Wang, Mizote Shota, Sawa Takayoshi, Yokoya Takayoshi, Seki Toshio, Matsuo Jiro, Tokunaga Tomoharu, Itoh Chihiro, Tsuruta Kenji, Fukaya Ryo, Nozawa Shunsuke, Adachi Shin-ichi, Takeda Jun, Onda Ken, Koshihara Shin-ya, Hayashi Yasuhiko, Nishina Yuta
ACS NANO
13
巻
(
9
)
頁：
10103
-
10112
2019年9月
-
Poorly controlled diabetes during pregnancy and lactation activates the Foxo1 pathway and causes glucose intolerance in adult offspring
Inoguchi Yukihiro, Ichiyanagi Kenji, Ohishi Hiroaki, Maeda Yasutaka, Sonoda Noriyuki, Ogawa Yoshihiro, Inoguchi Toyoshi, Sasaki Hiroyuki
SCIENTIFIC REPORTS
9
巻
(
1
)
頁：
10181
2019年7月
-
Novel roles of Drosophila FUS and Aub responsible for piRNA biogenesis in neuronal disorders
Wakisaka Keiko Tsuji, Tanaka Ryo, Hirashima Tomoki, Muraoka Yuuka, Azuma Yumiko, Yoshida Hideki, Tokuda Takahiko, Asada Satoshi, Suda Kojiro, Ichiyanagi Kenji, Ohno Seiko, Itoh Masanobu, Yamaguchi Masamitsu
BRAIN RESEARCH
1708
巻
頁：
207
-
219
2019年4月
-
TE studies in Japan: the fourth Japanese meeting on host-transposon interactions
Ichiyanagi Kenji, Saito Kuniaki
MOBILE DNA
10
巻
頁：
11
2019年3月
-
Accurate estimation of 5-methylcytosine in mammalian mitochondrial DNA
Matsuda Shigeru, Yasukawa Takehiro, Sakaguchi Yuriko, Ichiyanagi Kenji, Unoki Motoko, Gotoh Kazuhito, Fukuda Kei, Sasaki Hiroyuki, Suzuki Tsutomu, Kang Dongchon
SCIENTIFIC REPORTS
8
巻
(
1
)
頁：
5801
2018年4月
-
Combined Loss of JMJD1A and JMJD1B Reveals Critical Roles for H3K9 Demethylation in the Maintenance of Embryonic Stem Cells and Early Embryogenesis
Kuroki Shunsuke, Nakai Yuji, Maeda Ryo, Okashita Naoki, Akiyoshi Mika, Yamaguchi Yutaro, Kitano Satsuki, Miyachi Hitoshi, Nakato Ryuichiro, Ichiyanagi Kenji, Shirahige Katsuhiko, Kimura Hiroshi, Shinkai Yoichi, Tachibana Makoto
STEM CELL REPORTS
10
巻
(
4
)
頁：
1340-1354
2018年4月
-
Association of zygotic piRNAs derived from paternal P elements with hybrid dysgenesis in Drosophila melanogaster
Wakisaka Keiko Tsuji, Ichiyanagi Kenji, Ohno Seiko, Itoh Masanobu
MOBILE DNA
9
巻
頁：
7
2018年2月
-
Locus-specific hypomethylation of the mouse IAP retrotransposon is associated with transcription factor-binding sites
Shimosuga Ken-ichi, Fukuda Kei, Sasaki Hiroyuki, Ichiyanagi Kenji
MOBILE DNA
8
巻
頁：
20
2017年12月
-
Locus-specific hypomethylation of the mouse IAP retrotransposon is associated with transcription factor-binding sites.
査読有り
Shimosuga KI, Fukuda K, Sasaki H, Ichiyanagi K.
MOBILE DNA
8
巻
頁：
20
2017年12月
-
Diversity of P-element piRNA production among M' and Q strains and its association with P-M hybrid dysgenesis in Drosophila melanogaster.
査読有り
Wakisaka KT, Ichiyanagi K, Ohno S, Itoh M
MOBILE DNA
8
巻
頁：
13
2017年10月
-
Evolution of the sperm methylome of primates is associated with retrotransposon insertions and genome instability
査読有り
Fukuda Kei, Inoguchi Yukihiro, Ichiyanagi Kenji, Ichiyanagi Tomoko, Go Yasuhiro, Nagano Masashi, Yanagawa Yojiro, Takaesu Noboru, Ohkawa Yasuyuki, Imai Hiroo, Sasaki Hiroyuki
HUMAN MOLECULAR GENETICS
26
巻
(
18
)
頁：
3508
-
3519
2017年9月
-
Switching of dominant retrotransposon silencing strategies from posttranscriptional to transcriptional mechanisms during male germ-cell development in mice
査読有り
Inoue Kota, Ichiyanagi Kenji, Fukuda Kei, Glinka Michael, Sasaki Hiroyuki
PLOS GENETICS
13
巻
(
7
)
頁：
e1006926
2017年7月
-
The genetic diversity of D-loop sequences in eastern bent-winged bats (Miniopterus fuliginosus) living in Wakayama Prefecture, Japan
査読有り
Iida Keisuke, Kobayashi Ryosuke, Hengjan Yupadee, Nagata Nao, Yonemitsu Kenzo, Nunome Mitsuo, Kuwata Ryusei, Suzuki Kazuo, Ichiyanagi Kenji, Maeda Ken, Ohmori Yasushige, Hondo Eiichi
JOURNAL OF VETERINARY MEDICAL SCIENCE
79
巻
(
6
)
頁：
1142
-
1145
2017年6月
-
Iron-heme-Bach1 axis is involved in erythroblast adaptation to iron deficiency
査読有り
Kobayashi Masahiro, Kato Hiroki, Hada Hiroshi, Itoh-Nakadai Ari, Fujiwara Tohru, Muto Akihiko, Inoguchi Yukihiro, Ichiyanagi Kenji, Hojo Wataru, Tomosugi Naohisa, Sasaki Hiroyuki, Harigae Hideo, Igarashi Kazuhiko
HAEMATOLOGICA
102
巻
(
3
)
頁：
454
-
465
2017年3月
-
Software updates in the Illumina HiSeq platform affect whole-genome bisulfite sequencing.
査読有り
Toh H, Shirane K, Miura F, Kubo N, Ichiyanagi K, Hayashi K, Saitou M, Suyama M, Ito T, Sasaki H
BMC genomics
18
巻
(
1
)
頁：
31
2017年1月
-
Chd5 regulates MuERV-L/MERVL expression in mouse embryonic stem cells via H3K27me3 modification and histone H3.1/H3.2.
査読有り
117
巻
頁：
780-792
2016年
-
TE studies in Japan: The third Japanese meeting on host-transposon interactions.
7
巻
2016年
-
HSP90α plays an important role in piRNA biogenesis and retrotransposon repression in mouse.
査読有り
Ichiyanagi T., Ichiyanagi K., Ogawa A., Kuramochi-Miyagawa S., Nakano T., Chuma S., Sasaki H., and Udono H.
Nucleic Acids Res
42
巻
頁：
11903-11911
2014年
-
Regulating Pol III transcription to change Pol II transcriptome.
招待有り
13
巻
頁：
3625-3626
2014年
-
Transposable elements in eukaryotic genomes: epigenetic regulation by the host and functionalization for the host.
査読有り
Ichiyanagi K.
Genes Genet Syst
88
巻
頁：
1
2013年
-
Three novel ZBTB24 mutations identified in Japanese and Cape Verdean type 2 ICF syndrome patients.
査読有り
Nitta H., Unoki M., Ichiyanagi K., Kosho T., Shigemura T., Takahashi H., Velasco G., Francastel C., Picard C., Kubota T., and Sasaki H.
J Hum Genet
(
58
)
頁：
455-460
2013年
-
Targeted gene silencing in mouse germ cells by insertion of a homologous DNA into a piRNA generating locus.
査読有り
Yamamoto Y., Watanabe T., Hoki Y., Shirane K., Li Y., Ichiyanagi K., Kuramochi- Miyagawa S., Toyoda A., Fujiyama A., Oginuma M., Suzuki H., Sado T., Nakano T., and Sasaki, H.
Genome Res
23
巻
頁：
292-299
2013年
-
Identification of both copy number variation-type and constant-type core elements in a large segmental duplication region of the mouse genome.
査読有り
Umemori J., Mori A., Ichiyanagi K., Uno T., and Koide T.
BMC Genomics
14
巻
頁：
455
2013年
-
DNA methylation differences between humans and chimpanzees are associated with genetic changes, transcriptional divergence and disease genes.
査読有り
Fukuda K., Ichiyanagi K.*, Yamada Y., Go Y., Udono T., Wada S., Maeda M., Soejima H., Saitou N., Ito T., and Sasaki H.
J Hum Genet
58
巻
頁：
446-454
2013年
-
Accumulation and loss of non-CpG methylation during male germ-cell development.
査読有り
Ichiyanagi T., Ichiyanagi K., Miyake M., and Sasaki H.
Nucleic Acids Res
41
巻
頁：
738-745
2013年
-
Epigenetic regulation of transcription and possible functions of mammalian short interspersed elements, SINEs.
査読有り
88
巻
頁：
19-29
2013年
-
Inhibition of MspI cleavage activity by hydroxymethylation of the CpG site: A concern for DNA modification studies using restriction endonucleases.
査読有り
Ichiyanagi K.
Epigenetics
7
巻
頁：
131-136
2012年
-
Locus- and domain-dependent control of DNA methylation at mouse B1 retrotransposons during male germ cell development.
査読有り
Ichiyanagi K.*, Li Y., Watanabe T., Ichiyanagi T., Fukuda K., Kitayama J., Yamamoto Y., Kuramochi-Miyagawa S., Nakano T., Yabuta Y., Seki Y., Saitou M., and Sasaki H.
Genome Res
21
巻
頁：
2058-2066
2011年
-
Role for piRNAs and non-coding RNA in de novo DNA methylation of the imprinted mouse Rasgrf1 locus.
査読有り
Watanabe T., Tomizawa S., Mitsuya K., Totoki Y., Yamamoto Y., Kuramochi-Miyagawa S., Iida N., Hoki Y., Murphy P.J., Toyoda A., Gotoh K., Hiura H., Arima T., Fujiyama A., Sado T., Shibata T., Nakano T., Lin H., Ichiyanagi K., Soloway P. D., and Sasaki H.
Science
332
巻
頁：
848-852
2011年
