-
Insertion of short L1 sequences generates inter-strain histone acetylation differences in the mouse
Boyboy, BAG; Ichiyanagi, K
MOBILE DNA
Vol.
15
(
1
)
page：
11
2024.5
-
The sixth Japanese meeting on biological function and evolution through interactions between hosts and transposable elements
Ichiyanagi, K; Ikeda, Y; Saito, K
MOBILE DNA
Vol.
14
(
1
)
page：
22
2023.12
-
Mouse retrotransposons: sequence structure, evolutionary age, genomic distribution and function
Kawase, M; Ichiyanagi, K
GENES & GENETIC SYSTEMS
Vol.
98
(
6
)
page：
337
-
351
2023.11
-
Diversity and evolution of highly repetitive DNA sequences constituting chromosome-site specific heterochromatin in two Gerbillinae species
Uno, Y; Matsubara, K; Inoue, J; Inazawa, J; Shinohara, A; Koshimoto, C; Ichiyanagi, K; Matsuda, Y
CYTOGENETIC AND GENOME RESEARCH
Vol.
163
(
1-2
)
page：
42
-
51
2023.11
-
C3H/HeNSlc mouse with low phospholipid transfer protein expression showed dyslipidemia.
Kobayashi M, Kanbe F, Ishii R, Tsubouchi H, Hirai K, Miyasaka Y, Ohno T, Oda H, Ikeda S, Katoh H, Ichiyanagi K, Ishikawa A, Murai A, Horio F
Scientific reports
Vol.
13
(
1
)
page：
13813
2023.8
-
Sequence Divergence and Retrotransposon Insertion Underlie Interspecific Epigenetic Differences in Primates
Hirata, M; Ichiyanagi, T; Katoh, H; Hashimoto, T; Suzuki, H; Nitta, H; Kawase, M; Nakai, R; Imamura, M; Ichiyanagi, K
MOLECULAR BIOLOGY AND EVOLUTION
Vol.
39
(
10
)
2022.10
-
The Expression Dynamics of piRNAs Derived From Male Germline piRNA Clusters and Retrotransposons
Kawase, M; Ichiyanagi, K
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
Vol.
10
page：
868746
2022.5
-
Potential role of KRAB-ZFP binding and transcriptional states on DNA methylation of retroelements in human male germ cells
Fukuda, K; Makino, Y; Kaneko, S; Shimura, C; Okada, Y; Ichiyanagi, K; Shinkai, Y
ELIFE
Vol.
11
2022.3
-
The regulatory mechanisms that make mature sperm cells in the mouse
Ichiyanagi, K
GENES & GENETIC SYSTEMS
Vol.
97
(
1
)
page：
1
-
1
2022.2
-
The fifth Japanese meeting on biological function and evolution through interactions between hosts and transposable elements
Ichiyanagi, K; Saito, K
MOBILE DNA
Vol.
13
(
1
)
page：
3
2022.1
-
TFB2M and POLRMT are essential for mammalian mitochondrial DNA replication
Inatomi, T; Matsuda, S; Ishiuchi, T; Do, Y; Nakayama, M; Abe, S; Kasho, K; Wanrooij, S; Nakada, K; Ichiyanagi, K; Sasaki, H; Yasukawa, T; Kang, D
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH
Vol.
1869
(
1
)
page：
119167
2022.1
-
Quantitative Separation of Precipitation and Permafrost Waters Used for Evapotranspiration in a Boreal Forest: A Numerical Study Using Tracer Model
Park, H; Tanoue, M; Sugimoto, A; Ichiyanagi, K; Iwahana, G; Hiyama, T
JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES
Vol.
126
(
12
)
2021.12
-
melRNA-seq for Expression Analysis of SINE RNAs and Other Medium-Length Non-Coding RNAs
Mori, Y; Ichiyanagi, K
MOBILE DNA
Vol.
12
(
1
)
page：
15
2021.6
-
B2 SINE Copies Serve as a Transposable Boundary of DNA Methylation and histone Modifications in the Mouse
Ichiyanagi, T; Katoh, H; Mori, Y; Hirafuku, K; Boyboy, BA; Kawase, M; Ichiyanagi, K
MOLECULAR BIOLOGY AND EVOLUTION
Vol.
38
(
6
)
page：
2380
-
2395
2021.6
-
Dispersal history of <i>Miniopterus fuliginosus</i> bats and their associated viruses in east Asia
Kimprasit, T; Nunome, M; Iida, K; Murakami, Y; Wong, ML; Wu, CH; Kobayashi, R; Hengjan, Y; Takemae, H; Yonemitsu, K; Kuwata, R; Shimoda, H; Si, LF; Sohn, JH; Asakawa, S; Ichiyanagi, K; Maeda, K; Oh, HS; Mizutani, T; Kimura, J; Iida, A; Hondo, E
PLOS ONE
Vol.
16
(
1
)
page：
e0244006
2021.1
-
Combined deletions of <i>IHH</i> and <i>NHEJ1</i> cause chondrodystrophy and embryonic lethality in the Creeper chicken
Kinoshita, K; Suzuki, T; Koike, M; Nishida, C; Koike, A; Nunome, M; Uemura, T; Ichiyanagi, K; Matsuda, Y
COMMUNICATIONS BIOLOGY
Vol.
3
(
1
)
page：
144
2020.3
-
Non-transmissible MV Vector with Segmented RNA Genome Establishes Different Types of iPSCs from Hematopoietic Cells
Hiramoto, T; Tahara, M; Liao, JY; Soda, Y; Miura, Y; Kurita, R; Hamana, H; Inoue, K; Kohara, H; Miyamoto, S; Hijikata, Y; Okano, S; Yamaguchi, Y; Oda, Y; Ichiyanagi, K; Toh, H; Sasaki, H; Kishi, H; Ryo, A; Muraguchi, A; Takeda, M; Tani, K
MOLECULAR THERAPY
Vol.
28
(
1
)
page：
129
-
141
2020.1
-
Characterization of genetic-origin-dependent monoallelic expression in mouse embryonic stem cells
Ohishi, H; Yeung, WKA; Unoki, M; Ichiyanagi, K; Fukuda, K; Maenohara, S; Shirane, K; Chiba, H; Sado, T; Sasaki, H
GENES TO CELLS
Vol.
25
(
1
)
page：
54
-
64
2020.1
-
Selective Reduction Mechanism of Graphene Oxide Driven by the Photon Mode <i>versus</i> the Thermal Mode
Hada, M; Miyata, K; Ohmura, S; Arashida, Y; Ichiyanagi, K; Katayama, I; Suzuki, T; Chen, W; Mizote, S; Sawa, T; Yokoya, T; Seki, T; Matsuo, J; Tokunaga, T; Itoh, C; Tsuruta, K; Fukaya, R; Nozawa, S; Adachi, S; Takeda, J; Onda, K; Koshihara, S; Hayashi, Y; Nishina, Y
ACS NANO
Vol.
13
(
9
)
page：
10103
-
10112
2019.9
-
Poorly controlled diabetes during pregnancy and lactation activates the Foxo1 pathway and causes glucose intolerance in adult offspring
Inoguchi, Y; Ichiyanagi, K; Ohishi, H; Maeda, Y; Sonoda, N; Ogawa, Y; Inoguchi, T; Sasaki, H
SCIENTIFIC REPORTS
Vol.
9
(
1
)
page：
10181
2019.7
-
Novel roles of Drosophila FUS and Aub responsible for piRNA biogenesis in neuronal disorders.
Wakisaka KT, Tanaka R, Hirashima T, Muraoka Y, Azuma Y, Yoshida H, Tokuda T, Asada S, Suda K, Ichiyanagi K, Ohno S, Itoh M, Yamaguchi M
Brain research
Vol.
1708
page：
207
-
219
2019.4
-
TE studies in Japan: the fourth Japanese meeting on host-transposon interactions
Ichiyanagi, K; Saito, K
MOBILE DNA
Vol.
10
page：
11
2019.3
-
Accurate estimation of 5-methylcytosine in mammalian mitochondrial DNA
Matsuda Shigeru, Yasukawa Takehiro, Sakaguchi Yuriko, Ichiyanagi Kenji, Unoki Motoko, Gotoh Kazuhito, Fukuda Kei, Sasaki Hiroyuki, Suzuki Tsutomu, Kang Dongchon
SCIENTIFIC REPORTS
Vol.
8
(
1
)
page：
5801
2018.4
-
Combined Loss of JMJD1A and JMJD1B Reveals Critical Roles for H3K9 Demethylation in the Maintenance of Embryonic Stem Cells and Early Embryogenesis
Kuroki Shunsuke, Nakai Yuji, Maeda Ryo, Okashita Naoki, Akiyoshi Mika, Yamaguchi Yutaro, Kitano Satsuki, Miyachi Hitoshi, Nakato Ryuichiro, Ichiyanagi Kenji, Shirahige Katsuhiko, Kimura Hiroshi, Shinkai Yoichi, Tachibana Makoto
STEM CELL REPORTS
Vol.
10
(
4
)
page：
1340
-
1354
2018.4
-
Association of zygotic piRNAs derived from paternal P elements with hybrid dysgenesis in Drosophila melanogaster
Wakisaka Keiko Tsuji, Ichiyanagi Kenji, Ohno Seiko, Itoh Masanobu
MOBILE DNA
Vol.
9
page：
7
2018.2
-
Locus-specific hypomethylation of the mouse IAP retrotransposon is associated with transcription factor-binding sites
Shimosuga Ken-ichi, Fukuda Kei, Sasaki Hiroyuki, Ichiyanagi Kenji
MOBILE DNA
Vol.
8
page：
20
2017.12
-
Locus-specific hypomethylation of the mouse IAP retrotransposon is associated with transcription factor-binding sites.
Reviewed
Shimosuga KI, Fukuda K, Sasaki H, Ichiyanagi K.
MOBILE DNA
Vol.
8
page：
20
2017.12
-
Diversity of P-element piRNA production among M' and Q strains and its association with P-M hybrid dysgenesis in Drosophila melanogaster.
Reviewed
Wakisaka KT, Ichiyanagi K, Ohno S, Itoh M
MOBILE DNA
Vol.
8
page：
13
2017.10
-
Diversity of <i>P-</i>element piRNA production among M' and Q strains and its association with P-M hybrid dysgenesis in <i>Drosophila melanogaster</i>
Wakisaka, KT; Ichiyanagi, K; Ohno, S; Itoh, M
MOBILE DNA
Vol.
8
page：
13
2017.10
-
Evolution of the sperm methylome of primates is associated with retrotransposon insertions and genome instability.
Reviewed
Fukuda K., Inoguchi Y., Ichiyanagi K., Ichiyanagi T., Go Y., Nagano M., Yanagawa Y., Takaesu N., Ohkawa Y., Imai H., and Sasaki H.
Hum Mol Genet
Vol.
26
(
18
)
page：
3508
-
3519
2017.9
-
Switching of dominant retrotransposon silencing strategies from posttranscriptional to transcriptional mechanisms during male germ-cell development in mice.
Reviewed
Inoue K., Ichiyanagi K., Fukuda K., Glinka M., and Sasaki H.
PLoS Genet
Vol.
13
(
7
)
page：
e1006926
2017.7
-
The genetic diversity of D-loop sequences in eastern bent-winged bats (Miniopterus fuliginosus) living in Wakayama Prefecture, Japan.
Reviewed
Iida K., Kobayashi R., Hengjan Y., Nagata N., Yonemitsu K., Nunome M., Kuwata R., Suzuki K., Ichiyanagi K., Maeda K., OhmoriY., and Hondo E.
J Vet Med Sci
Vol.
79
(
6
)
page：
1142
-
1145
2017.6
-
Iron-heme-Bach1 axis is involved in erythroblast adaptation to iron deficiency.
Reviewed
Vol.
102
(
3
)
page：
454
-
465
2017.3
-
Software updates in the Illumina HiSeq platform affect whole-genome bisulfite sequencing.
Reviewed
Toh H., Shirane K., Miura F., Kubo N. Ichiyanagi K., Hayashi K., Saitou M., Suyama M., Ito T., and Sasaki H
BMC Genomics
Vol.
18
(
1
)
page：
31
2017.1
-
Chd5 regulates MuERV-L/MERVL expression in mouse embryonic stem cells via H3K27me3 modification and histone H3.1/H3.2.
Reviewed
Vol.
117
page：
780-792
2016
-
TE studies in Japan: The third Japanese meeting on host-transposon interactions.
Vol.
7
2016
-
HSP90α plays an important role in piRNA biogenesis and retrotransposon repression in mouse.
Reviewed
Ichiyanagi T., Ichiyanagi K., Ogawa A., Kuramochi-Miyagawa S., Nakano T., Chuma S., Sasaki H., and Udono H.
Nucleic Acids Res
Vol.
42
page：
11903-11911
2014
-
Regulating Pol III transcription to change Pol II transcriptome.
Invited
Vol.
13
page：
3625-3626
2014
-
Transposable elements in eukaryotic genomes: epigenetic regulation by the host and functionalization for the host.
Reviewed
Ichiyanagi K.
Genes Genet Syst
Vol.
88
page：
1
2013
-
Three novel ZBTB24 mutations identified in Japanese and Cape Verdean type 2 ICF syndrome patients.
Reviewed
Nitta H., Unoki M., Ichiyanagi K., Kosho T., Shigemura T., Takahashi H., Velasco G., Francastel C., Picard C., Kubota T., and Sasaki H.
J Hum Genet
(
58
)
page：
455-460
2013
-
Targeted gene silencing in mouse germ cells by insertion of a homologous DNA into a piRNA generating locus.
Reviewed
Yamamoto Y., Watanabe T., Hoki Y., Shirane K., Li Y., Ichiyanagi K., Kuramochi- Miyagawa S., Toyoda A., Fujiyama A., Oginuma M., Suzuki H., Sado T., Nakano T., and Sasaki, H.
Genome Res
Vol.
23
page：
292-299
2013
-
Identification of both copy number variation-type and constant-type core elements in a large segmental duplication region of the mouse genome.
Reviewed
Umemori J., Mori A., Ichiyanagi K., Uno T., and Koide T.
BMC Genomics
Vol.
14
page：
455
2013
-
DNA methylation differences between humans and chimpanzees are associated with genetic changes, transcriptional divergence and disease genes.
Reviewed
Fukuda K., Ichiyanagi K.*, Yamada Y., Go Y., Udono T., Wada S., Maeda M., Soejima H., Saitou N., Ito T., and Sasaki H.
J Hum Genet
Vol.
58
page：
446-454
2013
-
Accumulation and loss of non-CpG methylation during male germ-cell development.
Reviewed
Ichiyanagi T., Ichiyanagi K., Miyake M., and Sasaki H.
Nucleic Acids Res
Vol.
41
page：
738-745
2013
-
Epigenetic regulation of transcription and possible functions of mammalian short interspersed elements, SINEs.
Reviewed
Vol.
88
page：
19-29
2013
-
Inhibition of MspI cleavage activity by hydroxymethylation of the CpG site: A concern for DNA modification studies using restriction endonucleases.
Reviewed
Ichiyanagi K.
Epigenetics
Vol.
7
page：
131-136
2012
-
Locus- and domain-dependent control of DNA methylation at mouse B1 retrotransposons during male germ cell development.
Reviewed
Ichiyanagi K.*, Li Y., Watanabe T., Ichiyanagi T., Fukuda K., Kitayama J., Yamamoto Y., Kuramochi-Miyagawa S., Nakano T., Yabuta Y., Seki Y., Saitou M., and Sasaki H.
Genome Res
Vol.
21
page：
2058-2066
2011
-
Role for piRNAs and non-coding RNA in de novo DNA methylation of the imprinted mouse Rasgrf1 locus.
Reviewed
Watanabe T., Tomizawa S., Mitsuya K., Totoki Y., Yamamoto Y., Kuramochi-Miyagawa S., Iida N., Hoki Y., Murphy P.J., Toyoda A., Gotoh K., Hiura H., Arima T., Fujiyama A., Sado T., Shibata T., Nakano T., Lin H., Ichiyanagi K., Soloway P. D., and Sasaki H.
Science
Vol.
332
page：
848-852
2011
