Updated on 2025/04/13

写真a

 
TAKAHASHI Hirokazu
 
Organization
Graduate School of Bioagricultural Sciences Department of Plant Production Sciences Associate professor
Graduate School
Graduate School of Bioagricultural Sciences
Undergraduate School
School of Agricultural Sciences Department of Bioresource Sciences
Title
Associate professor

Degree 1

  1. 博士(農学) ( 2011.3   東京大学 ) 

Research Interests 4

  1. Soybean

  2. Waterlogging tolerance

  3. Drought tolerance

  4. Root system architecture

Research Areas 2

  1. Life Science / Plant molecular biology and physiology  / 植物生理学 植物分子生物学 植物分子遺伝学

  2. Environmental Science/Agriculture Science / Science in plant genetics and breeding  / 植物分子遺伝学 遺伝学 

Current Research Project and SDGs 1

  1. Research on the waterlogging tolerance in crop

Research History 3

  1. Nagoya University   Graduate School of Bioagricultural Sciences   Associate professor

    2018.4

  2. Nagoya University   Assistant Professor

    2015.4 - 2020.1

  3. Nagoya University

    2011.4 - 2015.3

Education 3

  1. The University of Tokyo

    2008.4 - 2011.3

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    Country: Japan

  2. The University of Tokyo

    2006.4 - 2008.3

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    Country: Japan

  3. Nihon University   Faculty of Bioresources

    2002.4 - 2006.3

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    Country: Japan

Professional Memberships 2

  1. 日本育種学会

  2. 日本植物生理学会

Committee Memberships 5

  1. 資源生物科学科実験実習委員   委員,副実習委員長  

    2020.4   

  2. 資源生物科学科担任   担任  

    2019.4   

  3. 就職委員会   委員  

    2018.4   

  4. 情報処理委員会   委員  

    2016.4 - 2018.3   

  5. 学科運営委員会   委員  

    2016.4 - 2018.3   

Awards 2

  1. 日本育種学会優秀発表賞

    2011   日本育種学会   湛水条件下でダイズの胚軸において形成される二次通気組織の解析.

    柳川麻子, 髙橋宏和, 平賀勧, 島村聡, 中園幹生

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    Award type:Award from Japanese society, conference, symposium, etc.  Country:Japan

  2. PCP論文賞

    2011   日本植物生理学会   Nod factor/nitrate-induced CLE genes that drive HAR1-mediated systemic regulation of nodulation.

    atoru Okamoto, Erika Ohnishi, Shusei Sato, Hirokazu Takahashi, Mikio Nakazono, Satoshi Tabata, Masayoshi Kawaguchi.

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    Award type:Award from Japanese society, conference, symposium, etc.  Country:Japan

 

Papers 71

  1. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8'-hydroxylase in rice. Reviewed International coauthorship

    Saika H, Okamoto M, Miyoshi K, Kushiro T, Shinoda S, Jikumaru Y, Fujimoto M, Arikawa T, Takahashi H, Ando M, Arimura S, Miyao A, Hirochika H, Kamiya Y, Tsutsumi N, Nambara E, Nakazono M

    Plant & cell physiology   Vol. 48 ( 2 ) page: 287-98   2007.2

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pcm003

    PubMed

  2. Drought induction of Arabidopsis 9-cis-epoxycarotenoid dioxygenase occurs in vascular parenchyma cells. Reviewed

    Endo A, Sawada Y, Takahashi H, Okamoto M, Ikegami K, Koiwai H, Seo M, Toyomasu T, Mitsuhashi W, Shinozaki K, Nakazono M, Kamiya Y, Koshiba T, Nambara E

    Plant physiology   Vol. 147 ( 4 ) page: 1984-93   2008.8

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1104/pp.108.116632

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  3. Separated transcriptomes of male gametophyte and tapetum in rice: validity of a laser microdissection (LM) microarray. Reviewed

    Suwabe K, Suzuki G, Takahashi H, Shiono K, Endo M, Yano K, Fujita M, Masuko H, Saito H, Fujioka T, Kaneko F, Kazama T, Mizuta Y, Kawagishi-Kobayashi M, Tsutsumi N, Kurata N, Nakazono M, Watanabe M

    Plant & cell physiology   Vol. 49 ( 10 ) page: 1407-16   2008.10

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pcn124

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  4. Various spatiotemporal expression profiles of anther-expressed genes in rice. Reviewed

    Hobo T, Suwabe K, Aya K, Suzuki G, Yano K, Ishimizu T, Fujita M, Kikuchi S, Hamada K, Miyano M, Fujioka T, Kaneko F, Kazama T, Mizuta Y, Takahashi H, Shiono K, Nakazono M, Tsutsumi N, Nagamura Y, Kurata N, Watanabe M, Matsuoka M

    Plant & cell physiology   Vol. 49 ( 10 ) page: 1417-28   2008.10

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pcn128

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  5. Nod factor/nitrate-induced CLE genes that drive HAR1-mediated systemic regulation of nodulation. Reviewed

    Okamoto S, Ohnishi E, Sato S, Takahashi H, Nakazono M, Tabata S, Kawaguchi M

    Plant & cell physiology   Vol. 50 ( 1 ) page: 67-77   2009.1

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pcn194

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  6. A method for obtaining high quality RNA from paraffin sections of plant tissues by laser microdissection. Reviewed

    Takahashi H, Kamakura H, Sato Y, Shiono K, Abiko T, Tsutsumi N, Nagamura Y, Nishizawa NK, Nakazono M

    Journal of plant research   Vol. 123 ( 6 ) page: 807-13   2010.11

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s10265-010-0319-4

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  7. The receptor-like kinase KLAVIER mediates systemic regulation of nodulation and non-symbiotic shoot development in Lotus japonicus. Reviewed

    Miyazawa H, Oka-Kira E, Sato N, Takahashi H, Wu GJ, Sato S, Hayashi M, Betsuyaku S, Nakazono M, Tabata S, Harada K, Sawa S, Fukuda H, Kawaguchi M

    Development (Cambridge, England)   Vol. 137 ( 24 ) page: 4317-25   2010.12

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1242/dev.058891

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  8. Cell division and cell elongation in the coleoptile of rice alcohol dehydrogenase 1-deficient mutant are reduced under complete submergence. Reviewed

    Takahashi H, Saika H, Matsumura H, Nagamura Y, Tsutsumi N, Nishizawa NK, Nakazono M

    Annals of botany   Vol. 108 ( 2 ) page: 253-61   2011.8

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/aob/mcr137

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  9. Identification of genes expressed in maize root cortical cells during lysigenous aerenchyma formation using laser microdissection and microarray analyses. Reviewed

    Rajhi I, Yamauchi T, Takahashi H, Nishiuchi S, Shiono K, Watanabe R, Mliki A, Nagamura Y, Tsutsumi N, Nishizawa NK, Nakazono M

    The New phytologist   Vol. 190 ( 2 ) page: 351-68   2011.4

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/j.1469-8137.2010.03535.x

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  10. Distinct gene expression profiles in egg and synergid cells of rice as revealed by cell type-specific microarrays. Reviewed

    Ohnishi T, Takanashi H, Mogi M, Takahashi H, Kikuchi S, Yano K, Okamoto T, Fujita M, Kurata N, Tsutsumi N

    Plant physiology   Vol. 155 ( 2 ) page: 881-91   2011.2

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1104/pp.110.167502

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  11. Comprehensive network analysis of anther-expressed genes in rice by the combination of 33 laser microdissection and 143 spatiotemporal microarrays. Reviewed

    Aya K, Suzuki G, Suwabe K, Hobo T, Takahashi H, Shiono K, Yano K, Tsutsumi N, Nakazono M, Nagamura Y, Matsuoka M, Watanabe M

    PloS one   Vol. 6 ( 10 ) page: e26162   2011

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1371/journal.pone.0026162

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  12. Tissue-specific transcriptome analysis in nodules of Lotus japonicus. Reviewed

    Takanashi K, Takahashi H, Sakurai N, Sugiyama A, Suzuki H, Shibata D, Nakazono M, Yazaki K

    Molecular plant-microbe interactions : MPMI   Vol. 25 ( 7 ) page: 869-76   2012.7

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1094/MPMI-01-12-0011-R

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  13. Acquisition of aluminium tolerance by modification of a single gene in barley. Reviewed

    Fujii M, Yokosho K, Yamaji N, Saisho D, Yamane M, Takahashi H, Sato K, Nakazono M, Ma JF

    Nature communications   Vol. 3   page: 713   2012.3

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1038/ncomms1726

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  14. AhNRAMP1 iron transporter is involved in iron acquisition in peanut. Reviewed

    Xiong H, Kobayashi T, Kakei Y, Senoura T, Nakazono M, Takahashi H, Nakanishi H, Shen H, Duan P, Guo X, Nishizawa NK, Zuo Y

    Journal of experimental botany   Vol. 63 ( 12 ) page: 4437-46   2012.7

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/jxb/ers117

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  15. Transcriptome analysis of giant pear fruit with fruit-specific DNA reduplication on a mutant branch. Reviewed

    Kenji Nashima, Hirokazu Takahashi, Mikio Nakazono, Tokurou Shimizu, Chikako Nishitani, Toshiya Yamamoto, Akihiro Itai, Kanji Isuzugawa, Toshio Hanada, Tadashi Takashina, Mari Kato, Shogo Matsumoto, Akira Oikawa, Katsuhiro Shiratake.

    Journal of the Japanese Society for Horticultural Science   Vol. 82   page: 301-311   2013

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    Language:English   Publishing type:Research paper (scientific journal)  

  16. Transcriptome analysis of developing ovules in rice isolated by laser microdissection. Reviewed

    Kubo T, Fujita M, Takahashi H, Nakazono M, Tsutsumi N, Kurata N

    Plant & cell physiology   Vol. 54 ( 5 ) page: 750-65   2013.5

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pct029

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  17. Microarray analysis of gene expression patterns during fruit development in European pear (Pyrus communis) Reviewed

    Kenji Nashima, Tokurou Shimizu, Chikako Nishitani, Toshiya Yamamoto, Hirokazu Takahashi, Mikio Nakazono, Akihiro Itai, Kanji Isuzugawa, Toshio Hanada, Tadashi Takashina, Shogo Matsumoto, Shungo Otagaki, Akira Oikawa, Katsuhiro Shiratake.

    Scientia Horticulturae   Vol. 54   page: 750-765   2013

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    Language:English   Publishing type:Research paper (scientific journal)  

  18. Molecular evidence for phytosiderophore-induced improvement of iron nutrition of peanut intercropped with maize in calcareous soil. Reviewed

    Xiong H, Kakei Y, Kobayashi T, Guo X, Nakazono M, Takahashi H, Nakanishi H, Shen H, Zhang F, Nishizawa NK, Zuo Y

    Plant, cell & environment   Vol. 36 ( 10 ) page: 1888-902   2013.10

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/pce.12097

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  19. Cell type-specific transcriptome of Brassicaceae stigmatic papilla cells from a combination of laser microdissection and RNA sequencing. Reviewed

    Osaka M, Matsuda T, Sakazono S, Masuko-Suzuki H, Maeda S, Sewaki M, Sone M, Takahashi H, Nakazono M, Iwano M, Takayama S, Shimizu KK, Yano K, Lim YP, Suzuki G, Suwabe K, Watanabe M

    Plant & cell physiology   Vol. 54 ( 11 ) page: 1894-906   2013.11

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pct133

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  20. Rice alcohol dehydrogenase 1 promotes survival and has a major impact on carbohydrate metabolism in the embryo and endosperm when seeds are germinated in partially oxygenated water. Reviewed

    Takahashi H, Greenway H, Matsumura H, Tsutsumi N, Nakazono M

    Annals of botany   Vol. 113 ( 5 ) page: 851-9   2014.4

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/aob/mct305

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  21. RCN1/OsABCG5, an ATP-binding cassette (ABC) transporter, is required for hypodermal suberization of roots in rice (Oryza sativa). Reviewed

    Shiono K, Ando M, Nishiuchi S, Takahashi H, Watanabe K, Nakamura M, Matsuo Y, Yasuno N, Yamanouchi U, Fujimoto M, Takanashi H, Ranathunge K, Franke RB, Shitan N, Nishizawa NK, Takamure I, Yano M, Tsutsumi N, Schreiber L, Yazaki K, Nakazono M, Kato K

    The Plant journal : for cell and molecular biology   Vol. 80 ( 1 ) page: 40-51   2014.10

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/tpj.12614

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  22. Transcriptome analysis of flower receptacle of the European pear (Pyrus communis L.) 'La France' and its giant fruit sport using next-generation sequencing technology. Reviewed

    Kenji Nashima, Tokurou Shimizu, Chikako Nishitani, Toshiya Yamamoto, Hirokazu Takahashi, Mikio Nakazono, Akihiro Itai, Kanji Isuzugawa, Toshio Hanada, Tadashi Takashina, Shogo Matsumoto, Shungo Otagaki, Akira Oikawa, Katsuhiro Shiratake.

    Journal of Horticultural Science & Biotechnology   Vol. 89   page: 293-300   2014

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  23. Spatial transcriptomes of iron-deficient and cadmium-stressed rice. Reviewed

    Ogo Y, Kakei Y, Itai RN, Kobayashi T, Nakanishi H, Takahashi H, Nakazono M, Nishizawa NK

    The New phytologist   Vol. 201 ( 3 ) page: 781-94   2014.2

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/nph.12577

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  24. Transcripts of two ent-copalyl diphosphate synthase genes differentially localize in rice plants according to their distinct biological roles. Reviewed

    Toyomasu T, Usui M, Sugawara C, Kanno Y, Sakai A, Takahashi H, Nakazono M, Kuroda M, Miyamoto K, Morimoto Y, Mitsuhashi W, Okada K, Yamaguchi S, Yamane H

    Journal of experimental botany   Vol. 66 ( 1 ) page: 369 - 376   2015.1

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/jxb/eru424

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  25. Transcriptional characteristics and differences in Arabidopsis stigmatic papilla cells pre- and post-pollination. Reviewed

    Matsuda T, Matsushima M, Nabemoto M, Osaka M, Sakazono S, Masuko-Suzuki H, Takahashi H, Nakazono M, Iwano M, Takayama S, Shimizu KK, Okumura K, Suzuki G, Watanabe M, Suwabe K

    Plant & cell physiology   Vol. 56 ( 4 ) page: 663-73   2015.4

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pcu209

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  26. Transcript profiles in cortical cells of maize primary root during ethylene-induced lysigenous aerenchyma formation under aerobic conditions. Reviewed

    Hirokazu Takahashi, Takaki Yamauchi, Imene Rajhi, Naoko K. Nishizawa, Mikio Nakazono

    Annals of Botany   Vol. 115   page: 879-894   2015.4

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/aob/mcv018

  27. Molecular cloning and expression analysis of the WEE1 and CCS52A in European pear (Pyrus communis L.) and their possible roles in a giant fruit mutant. Reviewed

    Toshio Hanada, Kenji Nashima, Mari Kato, Tadashi Takashina, Kazuo Ikeda, Sakamoto, Y., Hirokazu Takahashi, Mikio Nakazono, Akira Oikawa, Katsuhiro Shiratake, Kanji Isuzugawa.

    Journal of Horticultural Science & Biotechnology   Vol. 90   page: 511   2015

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  28. Transcriptional regulatory mechanism of alcohol dehydrogenase 1-deficient mutant of rice for cell survival under complete submergence. Reviewed

    Rice   Vol. 9   page: 51   2016

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1186/s12284-016-0124-3

  29. A major locus involved in the formation of the radial oxygen loss barrier in adventitious roots of teosinte Zea nicaraguensis is located on the short-arm of chromosome 3 Invited Reviewed

    Kohtaro Watanabe, Hirokazu Takahashi, Saori Sato, Shunsaku Nishiuchi,Fumie Omori, Al Imran Malik, Timothy David Colmer, Yoshiro Mano, Mikio Nakazono

    Plant, Cell & Enviroment   Vol. 40 ( 2 ) page: 304 - 316   2017.2

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/pce.12849

    Web of Science

  30. Molecular bases for phyllomorph development in a one-leaf plant, Monophyllaea glabra Reviewed

    Naoko Ishikawa, Hirokazu Takahashi, Mikio Nakazono, Hirokazu Tsukaya.

    American Journal of Botany   Vol. 104 ( 2 ) page: 233 - 240   2017.2

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.3732/ajb.1600303

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  31. Sucrose supply from leaves is required for aerenchymatous phellem formation in hypocotyl of soybean under waterlogged conditions

    Takahashi Hirokazu, Qi Xiaohua, Shimamura Satoshi, Yanagawa Asako, Hiraga Susumu, Nakazono Mikio

    ANNALS OF BOTANY   Vol. 121 ( 4 ) page: 723-732   2018.3

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/aob/mcx205

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  32. Formation of Apoplastic Barriers to Radial O₂ Loss in Rice Roots: Effects of Low-O₂ and High-Fe Conditions, and the Roles of Suberin, Glycerol Esters, and Iron Plaques.

    Jiménez JC, Suresh K, Zeisler-Diehl V, Oi T, Takahisa Hirakawa, Takahashi H, Schreiber L, Nakazono M

    Plant, cell & environment   Vol. 48 ( 5 ) page: 2937 - 2949   2025.5

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    Language:English   Publisher:Plant, Cell and Environment  

    Lack of O2 and high concentrations of iron (Fe) are common in flooded soils where Rice (Oryza sativa L.) is cultivated. We tested the hypothesis that growing in stagnant or high Fe conditions might induce the formation of apoplastic barriers in roots with different properties and chemical compositions. We measured radial O2 loss (ROL) from intact roots, the chemical composition of roots and the formation of root iron plaques in Fe-sensitive and Fe-tolerant rice genotypes grown in aerated, deoxygenated stagnant solutions or in aerated solutions containing high concentrations of Fe. Roots of plants grown in stagnant conditions developed tight barriers to ROL, while those grown in high Fe conditions developed only partial barriers. Chemical analysis of enzymatically isolated sclerenchyma/exodermal root cells indicated that roots grown in stagnant conditions showed increased amounts of suberin and glycerol esters. In contrast, roots in high Fe conditions showed an increase in suberization along with formation of iron plaques covering the roots. In high Fe conditions, exodermal suberization and the formation of partial ROL barriers were not influenced by the genotype's tolerance to Fe. The amount of O2 diffused from roots is influenced by the various layers that impede O2 diffusion. Specifically, increased amounts of glycerol esters in the suberized exodermis provide the greater resistance to ROL.

    DOI: 10.1111/pce.15319

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  33. Reaction norm for genomic prediction of plant growth: modeling drought stress response in soybean. Open Access

    Toda Y, Sasaki G, Ohmori Y, Yamasaki Y, Takahashi H, Takanashi H, Tsuda M, Kajiya-Kanegae H, Tsujimoto H, Kaga A, Hirai M, Nakazono M, Fujiwara T, Iwata H

    TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik   Vol. 137 ( 4 ) page: 77   2024.3

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    Language:English   Publisher:Theoretical and Applied Genetics  

    Key message: We proposed models to predict the effects of genomic and environmental factors on daily soybean growth and applied them to soybean growth data obtained with unmanned aerial vehicles. Abstract: Advances in high-throughput phenotyping technology have made it possible to obtain time-series plant growth data in field trials, enabling genotype-by-environment interaction (G × E) modeling of plant growth. Although the reaction norm is an effective method for quantitatively evaluating G × E and has been implemented in genomic prediction models, no reaction norm models have been applied to plant growth data. Here, we propose a novel reaction norm model for plant growth using spline and random forest models, in which daily growth is explained by environmental factors one day prior. The proposed model was applied to soybean canopy area and height to evaluate the influence of drought stress levels. Changes in the canopy area and height of 198 cultivars were measured by remote sensing using unmanned aerial vehicles. Multiple drought stress levels were set as treatments, and their time-series soil moisture was measured. The models were evaluated using three cross-validation schemes. Although accuracy of the proposed models did not surpass that of single-trait genomic prediction, the results suggest that our model can capture G × E, especially the latter growth period for the random forest model. Also, significant variations in the G × E of the canopy height during the early growth period were visualized using the spline model. This result indicates the effectiveness of the proposed models on plant growth data and the possibility of revealing G × E in various growth stages in plant breeding by applying statistical or machine learning models to time-series phenotype data.

    DOI: 10.1007/s00122-024-04565-5

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  34. Effects of irrigation on root growth and development of soybean: A 3-year sandy field experiment

    Bui Khuynh The, Naruse Toshiya, Yoshida Hideki, Toda Yusuke, Omori Yoshihiro, Tsuda Mai, Kaga Akito, Yamasaki Yuji, Tsujimoto Hisashi, Ichihashi Yasunori, Hirai Masami, Fujiwara Toru, Iwata Hiroyoshi, Matsuoka Makoto, Takahashi Hirokazu, Nakazono Mikio

    FRONTIERS IN PLANT SCIENCE   Vol. 13   page: 1047563   2022.12

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  35. Time-series multispectral imaging in soybean for improving biomass and genomic prediction accuracy

    Sakurai Kengo, Toda Yusuke, Kajiya-Kanegae Hiromi, Ohmori Yoshihiro, Yamasaki Yuji, Takahashi Hirokazu, Takanashi Hideki, Tsuda Mai, Tsujimoto Hisashi, Kaga Akito, Nakazono Mikio, Fujiwara Toru, Iwata Hiroyoshi

    PLANT GENOME   Vol. 15 ( 4 )   2022.12

  36. Genomic Prediction of Green Fraction Dynamics in Soybean Using Unmanned Aerial Vehicles Observations

    Toda Yusuke, Sasaki Goshi, Ohmori Yoshihiro, Yamasaki Yuji, Takahashi Hirokazu, Takanashi Hideki, Tsuda Mai, Kajiya-Kanegae Hiromi, Lopez-Lozano Raul, Tsujimoto Hisashi, Kaga Akito, Nakazono Mikio, Fujiwara Toru, Baret Frederic, Iwata Hiroyoshi

    FRONTIERS IN PLANT SCIENCE   Vol. 13   page: 828864   2022.3

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  37. Rice Genotypes Express Compensatory Root Growth With Altered Root Distributions in Response to Root Cutting

    Kawai Tsubasa, Chen Yinglong, Takahashi Hirokazu, Inukai Yoshiaki, Siddique Kadambot H. M.

    FRONTIERS IN PLANT SCIENCE   Vol. 13   page: 830577   2022.2

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  38. WUSCHEL-related homeobox family genes in rice control lateral root primordium size

    Kawai Tsubasa, Shibata Kyosuke, Akahoshi Ryosuke, Nishiuchi Shunsaku, Takahashi Hirokazu, Nakazono Mikio, Kojima Takaaki, Nosaka-Takahashi Misuzu, Sato Yutaka, Toyoda Atsushi, Lucob-Agustin Nonawin, Kano-Nakata Mana, Suralta Roel R., Niones Jonathan M., Chen Yinglong, Siddique Kadambot H. M., Yamauchi Akira, Inukai Yoshiaki

    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA   Vol. 119 ( 1 )   2022.1

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  39. Lateral roots, in addition to adventitious roots, form a barrier to radial oxygen loss in Zea nicaraguensis and a chromosome segment introgression line in maize

    Pedersen Ole, Nakayama Yohei, Yasue Hiroki, Kurokawa Yusuke, Takahashi Hirokazu, Floytrup Anja Heidi, Omori Fumie, Mano Yoshiro, Colmer Timothy David, Nakazono Mikio

    NEW PHYTOLOGIST   Vol. 229 ( 1 ) page: 94 - 105   2021.1

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  40. Root phenotyping: important and minimum information required for root modeling in crop plants

    Takahashi Hirokazu, Pradal Christophe

    BREEDING SCIENCE   Vol. 71 ( 1 ) page: 109 - 116   2021

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  41. Gene expression profiling of leaves in conjunction with a floral bud differentiation process in cultivated strawberry 'Akihime'

    Otagaki, S; Koembuoy, K; Takahashi, H; Isobe, S; Matsumoto, S

    IX INTERNATIONAL STRAWBERRY SYMPOSIUM   Vol. 1309   page: 19 - 24   2021

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  42. Differences in xylem development between Dutch and Japanese tomato (Solanum lycopersicum) correlate with cytokinin levels in hypocotyls

    Qi Xiaohua, Takahashi Hirokazu, Kawasaki Yasushi, Ohta Yuya, Isozaki Masahide, Kojima Mikiko, Takebayashi Yumiko, Sakakibara Hitoshi, Imanishi Shunsuke, Chen Xuehao, Nakazono Mikio

    ANNALS OF BOTANY   Vol. 126 ( 2 ) page: 315 - 322   2020.8

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  43. Detection and characterization of quantitative trait loci for coleoptile elongation under anaerobic conditions in rice

    Nishimura, T; Sasaki, K; Yamaguchi, T; Takahashi, H; Yamagishi, J; Kato, Y

    PLANT PRODUCTION SCIENCE   Vol. 23 ( 3 ) page: 374 - 383   2020.7

  44. CDPK5 and CDPK13 play key roles in acclimation to low oxygen through the control of RBOH-mediated ROS production in rice Open Access

    Jingxia Li, Takahiro Ishii, Miki Yoshioka, Yuta Hino, Mika Nomoto, Yasuomi Tada, Hirofumi Yoshioka, Hirokazu Takahashi, Takaki Yamauchi, Mikio Nakazono

    Plant Physiology   Vol. 197 ( 1 )   2024.12

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Oxford University Press (OUP)  

    Abstract

    CALCIUM-DEPENDENT PROTEIN KINASE (CDPK) stimulates reactive oxygen species (ROS)-dependent signaling by activating RESPIRATORY BURST OXIDASE HOMOLOG (RBOH). The lysigenous aerenchyma is a gas space created by cortical cell death that facilitates oxygen diffusion from the shoot to the root tips. Previously, we showed that RBOHH is indispensable for the induction of aerenchyma formation in rice (Oryza sativa) roots under low-oxygen conditions. Here, we showed that CDPK5 and CDPK13 localize to the plasma membrane where RBOHH functions. Mutation analysis of the serine at residues 92 and 107 of RBOHH revealed that these residues are required for CDPK5- and CDPK13-mediated activation of ROS production. The requirement of Ca2+ for CDPK5 and CDPK13 function was confirmed using in vitro kinase assays. CRISPR/Cas9-based mutagenesis of CDPK5 and/or CDPK13 revealed that the double knockout almost completely suppressed inducible aerenchyma formation, whereas the effects were limited in the single knockout of either CDPK5 or CDPK13. Interestingly, the double knockout almost suppressed the induction of adventitious root formation, which is widely conserved in vascular plants, under low-oxygen conditions. Our results suggest that CDPKs are essential for the acclimation of rice to low-oxygen conditions, and also for many other plant species conserving CDPK-targeted phosphorylation sites in RBOH homologues.

    DOI: 10.1093/plphys/kiae293

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  45. Leaf Gas Film 1 promotes glycerol ester accumulation and formation of a tight root barrier to radial O2 loss in rice. International journal Open Access

    Juan de la Cruz Jiménez, Siti Noorrohmah, Kiran Suresh, Viktoria V Zeisler-Diehl, Lucas León Peralta Ogorek, Max Herzog, Elisa Pellegrini, Keisuke Nagai, Motoyuki Ashikari, Hirokazu Takahashi, Ole Pedersen, Lukas Schreiber, Mikio Nakazono

    Plant physiology   Vol. 196 ( 4 ) page: 2437 - 2449   2024.12

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    Rice (Oryza sativa L.) and many other wetland plants form an apoplastic barrier in the outer parts of the roots to restrict radial O2 loss to the rhizosphere during soil flooding. This barrier facilitates longitudinal internal O2 diffusion via gas-filled tissues from shoot to root apices, enabling root growth in anoxic soils. We tested the hypothesis that Leaf Gas Film 1 (LGF1), which influences leaf hydrophobicity in rice, plays a crucial role in tight outer apoplastic barriers formation in rice roots. We examined the roots of a rice mutant (dripping wet leaf 7, drp7) lacking functional LGF1, its wild type, and an LGF1 overexpression line for their capacity to develop outer apoplastic barriers that restrict radial O2 loss. We quantified the chemical composition of the outer part of the root and measured radial O2 diffusion from intact roots. The drp7 mutant exhibited a weak barrier to radial O2 loss compared to the wild type. However, introducing functional LGF1 into the mutant fully restored tight barrier function. The formation of a tight barrier to radial O2 loss was associated with increased glycerol ester levels in exodermal cells, rather than differences in total root suberization or lignification. These results demonstrate that, in addition to its role in leaf hydrophobicity regulation, LGF1 plays an important role in controlling the function of the outer apoplastic barriers in roots. Our study suggests that increased deposition of glycerol esters in the suberized root exodermis establishes a tight barrier to radial O2 loss in rice roots.

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  46. Transcriptome Analysis of Rice Root Tips Reveals Auxin, Gibberellin and Ethylene Signaling Underlying Nutritropism. Open Access

    Kiyoshi Yamazaki, Yoshihiro Ohmori, Hirokazu Takahashi, Atsushi Toyoda, Yutaka Sato, Mikio Nakazono, Toru Fujiwara

    Plant & cell physiology   Vol. 65 ( 4 ) page: 671 - 679   2024.5

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    Nutritropism is a positive tropism toward nutrients in plant roots. An NH4+ gradient is a nutritropic stimulus in rice (Oryza sativa L.). When rice roots are exposed to an NH4+ gradient generated around nutrient sources, root tips bend toward and coil around the sources. The molecular mechanisms are largely unknown. Here, we analyzed the transcriptomes of the inside and outside of bending root tips exhibiting nutritropism to reveal nutritropic signal transduction. Tissues facing the nutrient sources (inside) and away (outside) were separately collected by laser microdissection. Principal component analysis revealed distinct transcriptome patterns between the two tissues. Annotations of 153 differentially expressed genes implied that auxin, gibberellin and ethylene signaling were activated differentially between the sides of the root tips under nutritropism. Exogenous application of transport and/or biosynthesis inhibitors of these phytohormones largely inhibited the nutritropism. Thus, signaling and de novo biosynthesis of the three phytohormones are necessary for nutritropism. Expression patterns of IAA genes implied that auxins accumulated more in the inside tissues, meaning that ammonium stimulus is transduced to auxin signaling in nutritropism similar to gravity stimulus in gravitropism. SAUR and expansin genes, which are known to control cell wall modification and to promote cell elongation in shoot gravitropism, were highly expressed in the inside tissues rather than the outside tissues, and our transcriptome data are unexplainable for differential elongation in root nutritropism.

    DOI: 10.1093/pcp/pcae003

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  47. Outer apoplastic barriers in roots: prospects for abiotic stress tolerance. International journal Open Access

    Lucas León Peralta Ogorek, Juan de la Cruz Jiménez, Eric J W Visser, Hirokazu Takahashi, Mikio Nakazono, Sergey Shabala, Ole Pedersen

    Functional plant biology : FPB   Vol. 51 ( 1 ) page: NULL   2024.1

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    Floods and droughts are becoming more frequent as a result of climate change and it is imperative to find ways to enhance the resilience of staple crops to abiotic stresses. This is crucial to sustain food production during unfavourable conditions. Here, we analyse the current knowledge about suberised and lignified outer apoplastic barriers, focusing on the functional roles of the barrier to radial O2 loss formed as a response to soil flooding and we discuss whether this trait also provides resilience to multiple abiotic stresses. The barrier is composed of suberin and lignin depositions in the exodermal and/or sclerenchyma cell walls. In addition to the important role during soil flooding, the barrier can also restrict radial water loss, prevent phytotoxin intrusion, salt intrusion and the main components of the barrier can impede invasion of pathogens in the root. However, more research is needed to fully unravel the induction pathway of the outer apoplastic barriers and to address potential trade-offs such as reduced nutrient or water uptake. Nevertheless, we suggest that the outer apoplastic barriers might act as a jack of all trades providing tolerance to multiple abiotic and/or biotic stressors.

    DOI: 10.1071/FP23133

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  48. Single-cell transcriptomic analysis of pea shoot development and cell-type-specific responses to boron deficiency. International journal Open Access

    Xi Chen, Yanqi Ru, Hirokazu Takahashi, Mikio Nakazono, Sergey Shabala, Steven M Smith, Min Yu

    The Plant journal : for cell and molecular biology   Vol. 117 ( 1 ) page: 302 - 322   2024.1

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    Understanding how nutrient stress impacts plant growth is fundamentally important to the development of approaches to improve crop production under nutrient limitation. Here we applied single-cell RNA sequencing to shoot apices of Pisum sativum grown under boron (B) deficiency. We identified up to 15 cell clusters based on the clustering of gene expression profiles and verified cell identity with cell-type-specific marker gene expression. Different cell types responded differently to B deficiency. Specifically, the expression of photosynthetic genes in mesophyll cells (MCs) was down-regulated by B deficiency, consistent with impaired photosynthetic rate. Furthermore, the down-regulation of stomatal development genes in guard cells, including homologs of MUTE and TOO MANY MOUTHS, correlated with a decrease in stomatal density under B deficiency. We also constructed the developmental trajectory of the shoot apical meristem (SAM) cells and a transcription factor interaction network. The developmental progression of SAM to MC was characterized by up-regulation of genes encoding histones and chromatin assembly and remodeling proteins including homologs of FASCIATA1 (FAS1) and SWITCH DEFECTIVE/SUCROSE NON-FERMENTABLE (SWI/SNF) complex. However, B deficiency suppressed their expression, which helps to explain impaired SAM development under B deficiency. These results represent a major advance over bulk-tissue RNA-seq analysis in which cell-type-specific responses are lost and hence important physiological responses to B deficiency are missed. The reported findings reveal strategies by which plants adapt to B deficiency thus offering breeders a set of specific targets for genetic improvement. The reported approach and resources have potential applications well beyond P. sativum species and could be applied to various legumes to improve their adaptability to multiple nutrient or abiotic stresses.

    DOI: 10.1111/tpj.16487

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  49. High-throughput Phenotyping of Soybean Biomass: Conventional Trait Estimation and Novel Latent Feature Extraction Using UAV Remote Sensing and Deep Learning Models Open Access

    Mashiro Okada, Clément Barras, Yusuke Toda, Kosuke Hamazaki, Yoshihiro Ohmori, Yuji Yamasaki, Hirokazu Takahashi, Hideki Takanashi, Mai Tsuda, Masami Yokota Hirai, Hisashi Tsujimoto, Akito Kaga, Mikio Nakazono, Toru Fujiwara, Hiroyoshi Iwata

    Plant Phenomics   Vol. 6   page: 0244   2024

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    DOI: 10.34133/plantphenomics.0244

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  50. Reaction norm for genomic prediction of plant growth: modeling drought stress response in soybean

    Yusuke Toda, Goshi Sasaki, Yoshihiro Ohmori, Yuji Yamasaki, Hirokazu Takahashi, Hideki Takanashi, Mai Tsuda, Hiromi Kajiya-Kanegae, Hisashi Tsujimoto, Akito Kaga, Masami Hirai, Mikio Nakazono, Toru Fujiwara, Hiroyoshi Iwata

        2023.8

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    Abstract

    Advances in high-throughput phenotyping technology have made it possible to obtain time-series plant growth data in field trials, enabling genotype-by-environment interaction (G×E) modeling of plant growth. Although the reaction norm is an effective method for quantitatively evaluating G×E and has been implemented in genomic prediction models, no reaction norm models have been applied to plant growth data. Here, we propose a novel reaction norm model for plant growth using spline and random forest models, in which daily growth is explained by environmental factors one day prior. The proposed model was applied to soybean canopy area and height to evaluate the influence of drought stress levels. Changes in the canopy area and height of 198 cultivars were measured by remote sensing using unmanned aerial vehicles. Multiple drought stress levels were set as treatments and their time-series soil moisture was measured. The models were evaluated using leave-one-environment-out cross-validation, in which a treatment-by-year combination was considered the environment. These results suggest that our model can capture G×E during the early growth, especially canopy height. Significant variations in the G×E of the canopy height during the early growth period were visualized using the estimated reaction norms. This result indicates the effectiveness of the proposed models on plant growth data and the possibility of revealing G×E in various growth stages in plant breeding by applying statistical or machine learning models to time-series phenotype data obtained with remote sensing.

    DOI: 10.21203/rs.3.rs-3267332/v1

    Other Link: https://www.researchsquare.com/article/rs-3267332/v1.html

  51. Triterpenoids in aerenchymatous phellem contribute to internal root aeration and waterlogging adaptability in soybeans. International journal

    Hirokazu Takahashi, Chisato Abo, Hayato Suzuki, Jutapat Romsuk, Takao Oi, Asako Yanagawa, Tomoka Gorai, Yukari Tomisaki, Mana Jitsui, Satoshi Shimamura, Hitoshi Mori, Akito Kaga, Masao Ishimoto, Hikaru Seki, Toshiya Muranaka, Mikio Nakazono

    The New phytologist   Vol. 239 ( 3 ) page: 936 - 948   2023.8

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    Aerenchymatous phellem (AP) is important for internal aeration and adaptation to waterlogging in plants. Herein, the extensive accumulation of triterpenoids such as lupeol and betulinic acid was identified in AP. However, the biological and physiological roles of these triterpenoids in plants are largely unknown. Lupeol is converted from 2,3-oxidosqualene by lupeol synthase (LUS) and oxidized to betulinic acid. Functional analysis of LUS genes in soybean revealed that GmLUS1 is crucial for triterpenoid biosynthesis in AP. Lupeol and betulinic acid were found to be the major components of epicuticular wax on the surface of AP cells, and they contributed to tissue hydrophobicity and oxygen transport to roots. Additionally, the lus1 mutant produced a shallow root system due to less oxygen transport via AP under waterlogged conditions. In conclusion, triterpenoid accumulation in AP aids internal aeration and root development for adaptation to waterlogging.

    DOI: 10.1111/nph.18975

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  52. The barrier to radial oxygen loss protects roots against hydrogen sulphide intrusion and its toxic effect. International journal Open Access

    Lucas León Peralta Ogorek, Hirokazu Takahashi, Mikio Nakazono, Ole Pedersen

    The New phytologist   Vol. 238 ( 5 ) page: 1825 - 1837   2023.6

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    The root barrier to radial O2 loss (ROL) is a key root trait preventing O2 loss from roots to anoxic soils, thereby enabling root growth into anoxic, flooded soils. We hypothesized that the ROL barrier can also prevent intrusion of hydrogen sulphide (H2 S), a potent phytotoxin in flooded soils. Using H2 S- and O2 -sensitive microsensors, we measured the apparent permeance to H2 S of rice roots, tested whether restricted H2 S intrusion reduced its adverse effects on root respiration, and whether H2 S could induce the formation of a ROL barrier. The ROL barrier reduced apparent permeance to H2 S by almost 99%, greatly restricting H2 S intrusion. The ROL barrier acted as a shield towards H2 S; O2 consumption in roots with a ROL barrier remained unaffected at high H2 S concentration (500 μM), compared to a 67% decline in roots without a barrier. Importantly, low H2 S concentrations induced the formation of a ROL barrier. In conclusion, the ROL barrier plays a key role in protecting against H2 S intrusion, and H2 S can act as an environmental signalling molecule for the induction of the barrier. This study demonstrates the multiple functions of the suberized/lignified outer part of the rice root beyond that of restricting ROL.

    DOI: 10.1111/nph.18883

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  53. Post-embryonic function of GLOBULAR EMBRYO 4 (GLE4)/OsMPK6 in rice development Open Access

    Ishimoto Kiyoe, Nosaka-Takahashi Misuzu, Kishi-Kaboshi Mitsuko, Watanabe Tsuneaki, Abe Kiyomi, Shimizu-Sato Sae, Takahashi Hirokazu, Nakazono Mikio, Hirochika Hirohiko, Sato Yutaka

    Plant Biotechnology   Vol. 40 ( 1 ) page: 9 - 13   2023.3

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    <p>In plants, mitogen activated protein kinases (MPKs) are involved in various signaling pathways that lead to biotic and abiotic responses as well as that regulate developmental processes. Among them, MPK6 and its closely related homologue, MPK3, act redundantly and are known to be involved in asymmetric cell divisions of meristemoid mother cells in stomata development and of zygotes in <i>Arabidopsis</i>. Loss-of-function mutants of <i>GLE4</i>/<i>OsMPK6</i>, which is an orthologue of <i>MPK6</i> in rice, showed a defect in polarity establishment in early stage of embryogenesis. However, because of the embryo lethality of the mutations, the function of GLE4/OsMPK6 in post-embryonic development is not clarified. Here, we report the analysis of post embryonic function of GLE4/OsMPK6 in vegetative stage of rice using regenerated <i>gle4</i>/<i>osmpk6</i> homozygous plants from tissue culture. The regenerated plants are dwarf and produce multiple shoots with small leaves. These shoots never develop into reproductive stage, instead, proliferate vegetative shoots repeatedly. Leaves of <i>gle4</i>/<i>osmpk6</i> have small leaf blade at the tip and blade-sheath boundary become obscure. Stomata arrangement is also disturbed in <i>gle4</i>/<i>osmpk6</i> leaf blade. The shape of shoot apical meristem of <i>gle4</i>/<i>osmpk6</i> become disorganized. Thus, GLE4/OsMPK6 functions in shoot organization and stomata patterning in the post embryonic development in rice.</p>

    DOI: 10.5511/plantbiotechnology.22.1117a

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  54. Random regression for modeling soybean plant response to irrigation changes using time-series multispectral data Open Access

    Kengo Sakurai, Yusuke Toda, Kosuke Hamazaki, Yoshihiro Ohmori, Yuji Yamasaki, Hirokazu Takahashi, Hideki Takanashi, Mai Tsuda, Hisashi Tsujimoto, Akito Kaga, Mikio Nakazono, Toru Fujiwara, Hiroyoshi Iwata

    Frontiers in Plant Science   Vol. 14   page: 1201806   2023

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    Plant response to drought is an important yield-related trait under abiotic stress, but the method for measuring and modeling plant responses in a time series has not been fully established. The objective of this study was to develop a method to measure and model plant response to irrigation changes using time-series multispectral (MS) data. We evaluated 178 soybean (Glycine max (L.) Merr.) accessions under three irrigation treatments at the Arid Land Research Center, Tottori University, Japan in 2019, 2020 and 2021. The irrigation treatments included W5: watering for 5 d followed by no watering 5 d, W10: watering for 10 d followed by no watering 10 d, D10: no watering for 10 d followed by watering 10 d, and D: no watering. To capture the plant responses to irrigation changes, time-series MS data were collected by unmanned aerial vehicle during the irrigation/non-irrigation switch of each irrigation treatment. We built a random regression model (RRM) for each of combination of treatment by year using the time-series MS data. To test the accuracy of the information captured by RRM, we evaluated the coefficient of variation (CV) of fresh shoot weight of all accessions under a total of nine different drought conditions as an indicator of plant’s stability under drought stresses. We built a genomic prediction model () using the genetic random regression coefficients of RRM as secondary traits and evaluated the accuracy of each model for predicting CV. In 2020 and 2021,the mean prediction accuracies of built in the changing irrigation treatments (r = 0.44 and 0.49, respectively) were higher than that in the continuous drought treatment (r = 0.34 and 0.44, respectively) in the same year. When the CV was predicted using the across 2020 and 2021 in the changing irrigation treatment, the mean prediction accuracy (r = 0.46) was 42% higher than that of the simple genomic prediction model (r =0.32). The results suggest that this RRM method using the time-series MS data can effectively capture the genetic variation of plant response to drought.

    DOI: 10.3389/fpls.2023.1201806

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  55. Asymmetric auxin distribution establishes a contrasting pattern of aerenchyma formation in the nodal roots of Zea nicaraguensis during gravistimulation Reviewed Open Access

    Jiayang Ning, Takaki Yamauchi, Hirokazu Takahashi, Fumie Omori, Yoshiro Mano, Mikio Nakazono

    Frontiers in Plant Science   Vol. 14   page: 1133009   2023

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    DOI: 10.3389/fpls.2023.1133009

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  56. Identification of basic helix-loop-helix transcription factors that activate betulinic acid biosynthesis by RNA-sequencing of hydroponically culturedLotus japonicus

    Hayato Suzuki, Hirokazu Takahashi, Ery Odette Fukushima, Mikio Nakazono, Toshiya Muranaka, Hikaru Seki

        2022.11

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  57. Root phenotyping: important and minimum information required for root modeling in crop plants Invited Reviewed International coauthorship

    Hirokazu Takahashi, Christophe Pradal

    Breeding Science   Vol. 711 ( 1 ) page: 109 - 116   2021.2

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    DOI: https://doi.org/10.1270/jsbbs.20126

  58. Formation of a barrier to radial oxygen loss in L-type lateral roots of rice Reviewed

    Siti Noorrohmah, Hirokazu Takahashi, Mikio Nakazono

    Plant Root   Vol. 14   page: 33 - 41   2021.1

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    DOI: https://doi.org/10.3117/plantroot.14.33

  59. Expression analysis of genes for cytochrome P450 CYP86 and glycerol-3-phosphate acyltransferase related to suberin biosynthesis in rice roots under stagnant deoxygenated conditions Open Access

    Nishiuchi Shunsaku, Watanabe Kohtaro, Sato Saori, Takahashi Hirokazu, Nakazono Mikio

    Plant Root   Vol. 15 ( 0 ) page: 19 - +   2021

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    <p>The radial oxygen loss (ROL) barrier formed on the outer cell layers of roots of rice (<i>Oryza sativa</i>) contributes to efficient oxygen transfer through the aerenchyma from the aerial parts to the root apex. It is hypothesized that suberin accumulation in the exodermis contributes to an apoplastic barrier and plays a vital role in ROL barrier formation. A previous study reported that some genes encoding cytochrome P450 family 86 (<i>CYP86</i>) and glycerol-3-phosphate acyltransferase (<i>GPAT</i>) might be involved in suberin biosynthesis during ROL barrier development of rice roots. However, how these genes are expressed and their contribution to the sequential development of suberin accumulation in rice roots remains unclear. In this study, four <i>CYP86</i> and five <i>GPAT</i> genes of rice were identified as candidate genes involved in suberin biosynthesis in roots using sequence homology alignment with <i>Arabidopsis</i> suberin and cutin biosynthesis genes. Gene expression analyses revealed that expression of the candidate genes was induced at the region where suberin biosynthesis occurred under stagnant deoxygenated conditions. These genes showed two types of spatiotemporal expression patterns, at the regions of 5–25 mm and 25–35 mm from the root apex. Tissue-specific expression analyses using laser microdissection and histochemical GUS staining revealed that candidate gene expression was similar in the cell layer of the root exodermis. These results suggest that the selected <i>CYP86</i> and <i>GPAT</i> genes are involved in suberin biosynthesis in the exodermis, and that suberin biosynthesis in the root may be controlled by the spatiotemporal expression of two groups of genes.</p>

    DOI: 10.3117/plantroot.15.19

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  60. Laser microdissection: sample preparation and applications

    Imene Rajhi, Hirokazu Takahashi, Katsuhiro Shiono, Mikio Nakazono

    Euro-Mediterranean Journal for Environmental Integration   Vol. 6 ( 1 )   2020.11

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    DOI: 10.1007/s41207-020-00209-4

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  61. Detection and characterization of quantitative trait loci for coleoptile elongation under anaerobic conditions in rice. Reviewed

    37. Tomio Nishimura, Kazuhiro Sasaki, Takuya Yamaguchi, Hirokazu Takahashi, Junko Yamagishi, Yoichiro Kato

    Plant Production Science   Vol. 23 ( 3 ) page: 374 - 383   2020.3

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    DOI: https://doi.org/10.1080/1343943X.2020.1740600

  62. RNA-seq Analysis of Meristem Cells Identifies the FaFT3 Gene as a Common Floral Inducer in Japanese Cultivated Strawberry

    Koembuoy Khoem, Hasegawa Shiori, Otagaki Shungo, Takahashi Hirokazu, Nagano Soichiro, Isobe Sachiko, Shiratake Katsuhiro, Matsumoto Shogo

    HORTICULTURE JOURNAL   Vol. 89 ( 2 ) page: 138 - 146   2020

  63. Formation of a barrier to radial oxygen loss in L-type lateral roots of rice Open Access

    Noorrohmah Siti, Takahashi Hirokazu, Nakazono Mikio

    Plant Root   Vol. 14 ( 0 ) page: 33 - 41   2020

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    <p>A barrier to restrict radial oxygen loss (ROL) promotes the adaptation of plants to waterlogged soil conditions. A ROL barrier is formed in the basal parts of roots and contributes to the enhancement of the longitudinal diffusion of oxygen (O<sub>2</sub>) via aerenchyma toward the root tips. The adventitious roots of rice (<i>Oryza sativa</i>) can form a ROL barrier in waterlogged soil; however, whether a ROL barrier can be formed in the lateral roots (LRs) of rice remains unclear. Rice possesses two types of LRs: L- and S-type. L-type LRs are generally long, thick, and capable of branching, whereas S-type LRs are short, thin, and incapable of branching. In this study, we examined whether the L- and S-type LRs of rice possess the ability to form ROL barriers. In L-type LRs, a ROL barrier was formed; the aerenchyma, which is constitutively formed under aerated conditions, was further developed under stagnant deoxygenated conditions, suggesting that these traits promote the supply of O<sub>2</sub> to the root tips of LRs. However, neither a ROL barrier, nor aerenchyma was formed in S-type LRs, and thus ROL was observed mostly in the basal parts. Patterns of deposition of suberin, which is thought to be one of the components of the ROL barrier, were consistent with the patterns of ROL-barrier formation in L-type and S-type LRs. These results suggest that L- and S-type LRs play distinct roles in the growth of rice plants in waterlogged soils and in oxygenating the rhizosphere.</p>

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  64. QTLs for constitutive aerenchyma from Zea nicaraguensis improve tolerance of maize to root-zone oxygen deficiency

    Gong Fangping, Takahashi Hirokazu, Omori Fumie, Wang Wei, Mano Yoshiro, Nakazono Mikio

    JOURNAL OF EXPERIMENTAL BOTANY   Vol. 70 ( 21 ) page: 6475 - 6487   2019.11

  65. Rice acclimation to soil flooding: Low concentrations of organic acids can trigger a barrier to radial oxygen loss in roots

    Colmer Timothy David, Kotula Lukasz, Malik Al Imran, Takahashi Hirokazu, Konnerup Dennis, Nakazono Mikio, Pedersen Ole

    PLANT CELL AND ENVIRONMENT   Vol. 42 ( 7 ) page: 2183 - 2197   2019.7

  66. Specification of basal region identity after asymmetric zygotic division requires mitogen-activated protein kinase 6 in rice.

    Ishimoto K, Sohonahra S, Kishi-Kaboshi M, Itoh JI, Hibara KI, Sato Y, Watanabe T, Abe K, Miyao A, Nosaka-Takahashi M, Suzuki T, Ta NK, Shimizu-Sato S, Suzuki T, Toyoda A, Takahashi H, Nakazono M, Nagato Y, Hirochika H, Sato Y

    Development (Cambridge, England)   Vol. 146 ( 13 )   2019.6

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  67. Functional analyses of cultivated strawberry FT and TFL1 homologs

    Koembuoy K., Nakajima R., Otagaki S., Kurokura T., Takahashi H., Nakazono M., Shiratake K., Matsumoto S.

    VIII INTERNATIONAL STRAWBERRY SYMPOSIUM   Vol. 1156   page: 95 - 102   2017

  68. Mechanisms for coping with submergence and waterlogging in rice. Reviewed

    Nishiuchi S, Yamauchi T, Takahashi H, Kotula L, Nakazono M

    Rice (New York, N.Y.)   Vol. 5 ( 1 ) page: 2   2012

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    DOI: 10.1186/1939-8433-5-2

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  69. How Do Plants Acclimate to Waterlogged Conditions? Reviewed

    SHIONO Katsuhiro, TAKAHASHI Hirokazu, NAKAZONO Mikio

    KAGAKU TO SEIBUTSU   Vol. 46 ( 4 ) page: 245-251   2008.4

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  70. Cell type-specific gene expression profiling in plants by using a combination of laser microdissection and high-throughput technologies. Reviewed

    Ohtsu K, Takahashi H, Schnable PS, Nakazono M

    Plant & cell physiology   Vol. 48 ( 1 ) page: 3-7   2007.1

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    DOI: 10.1093/pcp/pcl049

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  71. レーザーマイクロダイセクション法 Reviewed

    高橋 宏和, 中園 幹生

    日本作物學會紀事   Vol. 75 ( 4 ) page: 583-585   2006.10

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    高等植物は機能の異なる数十種類の細胞より構成されている.個々の細胞・組織の役割について理解するためには,それらの細胞・組織を純粋に単離して,DNA, RNA,タンパク質,代謝産物等を抽出し,解析する必要がある.しかし,これまでの遺伝子発現解析などの研究は,主に葉,根,茎,花といった器官レベルで行われてきた.器官レベルの解析では,特定の細胞・組織で機能する遺伝子を見逃す可能性があったが,近年,標的細胞・組織のみを単離することができるレーザーマイクロダイセクションの植物への適用が実現したことにより,細胞・組織レベルでの精度の高い遺伝子発現解析が可能となった.本稿では,このレーザーマイクロダイセクション法の概略について紹介する.

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Books 5

  1. Cavity Tissue for the Internal Aeration in Plants

    Takahashi H., Nakazono M.( Role: Joint author)

    Responses of Plants to Soil Flooding  2024.1  ( ISBN:9789819991129, 9789819991112

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    Language:Japanese

    Internal aeration is essential for the adaptation to excess water stress. Aquatic-and semi-aquatic plants possessed several traits for internal aeration. Cavity tissues in leaves, stem, and roots are aisle for the gas movement between parts above and below the water level under excess water conditions, which are called “aerenchyma.” Aerenchyma is the internal gas space contributed to internal aeration but is morphologically different in each plant species. Aerenchyma is largely classified as primary and secondary aerenchyma. Primary aerenchyma, especially in lysigenous aerenchyma, has been well studied, and several evidences related to the mechanisms of aerenchyma formation are also recently reported. Several plants form lysigenous aerenchyma even under aerobic conditions and enlarge lysigenous aerenchyma in response to low-oxygen conditions. These aerenchyma are distinguished, and the former is defined as a “constitutive” aerenchyma, and the latter is as “inducible” aerenchyma. Additionally, new insight into aerenchymatous phellem (a type of secondary aerenchyma) is also shown. In this chapter, we summarized the characteristics of each type of aerenchyma and present recent advances in understanding the mechanisms of lysigneous aerenchyma formation and secondary aerenchyma.

    DOI: 10.1007/978-981-99-9112-9_6

    Scopus

  2. 植物学の百科事典 Reviewed

    髙橋宏和,中園幹生( Role: Contributor ,  低酸素)

    日本植物学会 編 丸善出版  2016.6  ( ISBN:4621300385

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    Total pages:802   Responsible for pages:436-437   Language:Japanese Book type:Dictionary, encyclopedia

  3. 植物学の百科事典 Reviewed

    髙橋宏和,中園幹生( Role: Contributor ,  細胞間隙)

    日本植物学会 編 丸善出版  2016.6  ( ISBN:4621300385

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    Total pages:802   Responsible for pages:534-535   Language:Japanese Book type:Dictionary, encyclopedia

  4. Plant Cell Monographs: Low-Oxygen Stress in Plants. Reviewed International journal

    Hirokazu Takahashi, Takaki Yamauchi, Timothy David Colmer, Mikio Nakazono( Role: Contributor)

    Springer  2014.1  ( ISBN:3709112532

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    Total pages:437   Responsible for pages:247-265   Language:English Book type:Scholarly book

  5. 発芽生物学 種子発芽の生理・生態・分子機構.

    髙橋宏和, 中園幹生( Role: Contributor ,  コラム3 イネ実生の嫌気応答 ー冠水下で伸びる謎に迫る. )

    種生物学会 編 文一総合出版  2009.3 

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    Total pages:440   Responsible for pages:101-104   Language:Japanese Book type:Scholarly book

MISC 2

  1. 植物凍結切片からの遺伝子発現解析 Invited

    髙橋宏和, 中園幹生, 西澤直子

    Leica application note Ⅷ     2010

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    Authorship:Lead author  

  2. パラフィン包埋標本(植物組織)からのRNAの抽出 -「マイクロウェーブ法」によるパラフィン標本作製- Invited

    髙橋宏和, 中園幹生, 西澤直子, 稲田のりこ.

    Leica application note Ⅳ     2008

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    Authorship:Lead author   Language:Japanese  

Presentations 30

  1. ダイズの二次通気組織形成に関与する制御因子の探索

    馬場唯菜、竹林裕美子、小嶋美紀子、髙橋実鈴、Nhung Ta, Kim、佐藤 豊、榊原 均、中園幹生、高橋 宏和

    日本育種学会第139回講演会  2021.3  日本育種学会

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:オンライン大会   Country:Japan  

  2. 日本のトマト生産がオランダに追いつくため必要なこと Invited

    髙橋宏和

    東郷農場講演会  2018.7  東郷町

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    Language:Japanese   Presentation type:Oral presentation (invited, special)  

    Venue:東郷町役場   Country:Japan  

  3. トマトの物質輸送特性を成立させるマイクロアーキテクチャ Invited

    髙橋宏和,中園 幹生

    平成30年度秋季大会  2018.9  園芸学会

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    Language:Japanese   Presentation type:Oral presentation (invited, special)  

    Venue:鹿児島大学   Country:Japan  

  4. 鳥取砂丘圃場を利用したダイズの根系フェノタイピング

    成瀬敏也、Bui Khuynh、高橋宏和、平野 恒、戸田悠介、大森良弘、津田麻衣、辻本 壽、山崎裕司、澤田有司、平井優美、藤原 徹、岩田洋佳、Christophe Pradal、松岡 信、中園幹生

    日本育種学会第138回講演会  2020.10  日本育種学会

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:オンライン大会   Country:Japan  

  5. Laser Microdissectionを利用した組織特異的なマイクロアレイ解析 Invited

    髙橋宏和

    ワークショップ『Agilentマイクロアレイ基盤の整備とマイクロアレイ実験の展望』  2012.3  岡山大学

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    Language:Japanese   Presentation type:Oral presentation (invited, special)  

    Venue:岡山大学   Country:Japan  

  6. トウモロコシにおける通気組織形成時のエチレン応答性遺伝子の発現解析.

    髙橋宏和, 山内卓樹, Imene Rajhi, 長村吉晃, 堤伸浩, 西澤直子, 中園幹生

    日本育種学会第122回講演会  2012.9  日本育種学会

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:京都産業大学   Country:Japan  

  7. ダイズの二次通気組織におけるトリテルペン合成遺伝子の発現解析

    高橋宏和, 柳川麻子, 清水裕子, 福島エリオデット, 平賀勧, 島村聡, 關光, 村中俊哉, 中園幹生

    日本育種学会第123回講演会  2013.3  日本育種学会

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:東京農業大学   Country:Japan  

  8. 糖によるダイズ二次通気組形成の制御機構の解明

    高橋宏和, 斉暁花, 平賀勧, 島村聡, 中園幹生

    日本育種学会第125回講演会  2014.3  日本育種学会

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:東北大学   Country:Japan  

  9. 日蘭トマト品種間における維管束組織の違い

    高橋宏和

    農学中手の会  2016.11  農学中手の会

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:滋賀県雄琴温泉   Country:Japan  

  10. 死なずにできるダイズの通気組織

    高橋宏和

    農学中手の会  2017.12  農学中手の会

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:滋賀県雄琴温泉   Country:Japan  

  11. Laser Microdissectionを用いたトウモロコシの根の通気組織形成過程で発現する遺伝子の同定. International coauthorship

    髙橋宏和, 渡邊亮介,西澤直子, Patrick S. Schnable, 中園幹生

    根研究集会  2006.5  根研究集会

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    Language:Japanese   Presentation type:Poster presentation  

    Venue:拓殖大学   Country:Japan  

  12. レーザーマイクロダイセクション法を用いたreduced adh activity (rad) 変異体の子葉鞘における遺伝子の発現解析

    髙橋宏和, 雑賀啓明, 松村英生, 長村吉晃, 西澤直子, 堤伸浩, 中園幹生

    第48回日本植物生理学会  2007.3  日本植物生理学会

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    Language:Japanese   Presentation type:Poster presentation  

    Venue:愛媛大学   Country:Japan  

  13. トウモロコシの種子根の通気組織形成過程で発現する遺伝子の同定 International coauthorship

    髙橋宏和, Imene Rajhi , 塩野克宏, Tieming Ji , 渡邊亮介, 大津和弘, 菅野明, Patrick S. Schnable, 西澤直子, 堤伸浩, 中園幹生

    第50回日本植物生理学会  2009.3  日本植物生理学会

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    Language:Japanese   Presentation type:Poster presentation  

    Venue:愛媛大学   Country:Japan  

  14. イネreduced adh activity (rad) 変異体の子葉鞘における細胞分裂・伸長の抑制

    髙橋宏和, 雑賀啓明, 松村英生, 長村吉晃, 西澤直子, 堤伸浩, 中園幹生

    日本育種学会第115回講演会  2009.3  日本育種学会

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:つくば   Country:Japan  

  15. ダイズにおける挿し木時の不定根と二次通気組織の形成へのオーキシンの影響

    髙橋宏和, 中園幹生

    根研究集会  2013.11  根研究集会

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    Language:Japanese   Presentation type:Poster presentation  

    Venue:畜産草地研究所   Country:Japan  

  16. イネ発芽時の本葉の細胞分裂は嫌気環境下で阻害される

    髙橋宏和、長村吉晃、堤伸浩、西澤直子、中園幹生

    農研機構シンポジ農研機構シンポジウム麦・大豆栽培における湿害の現実と研究展開  2013.12  農研機構

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    Language:Japanese   Presentation type:Poster presentation  

    Venue:東京大学   Country:Japan  

  17. イネのアルコール脱水素酵素活性の低下による冠水発芽への影響

    高橋宏和, Hank Greenway, 松村英生、堤伸浩, 中園幹生

    イネ遺伝学・分子生物学ワークショプ2014  2014.7  国立遺伝学研究所

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    Language:Japanese   Presentation type:Poster presentation  

    Venue:東京大学   Country:Japan  

  18. ダイズの二次通気組織形成時における糖代謝関連遺伝子の発現解析

    高橋宏和, 柳川麻子, 平賀勧, 島村聡, 中園幹生

    日本育種学会第129回講演会  2016.3  日本育種学会

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    Language:Japanese   Presentation type:Poster presentation  

    Venue:横浜市立大学   Country:Japan  

  19. 日蘭トマト品種における木部組織の発達の品種間差とその利用

    髙橋宏和

    収量や成分を自在にコントロールできる太陽光型植物工場」マッチングフォーラム  2019.2  農研機構

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    Language:Japanese   Presentation type:Poster presentation  

    Venue:日本橋ライフサイエンスハブ   Country:Japan  

  20. トウモロコシの通気組織形成に関与するエチレン応答性遺伝子の探索.

    髙橋宏和, 山内卓樹, Rajhi Imene, 長村吉晃, 堤伸浩, 西澤直子, 中園幹生

    日本育種学会第120回講演会  2011.9  日本育種学会

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:福井県立大学   Country:Japan  

  21. イネreduced adh activity (rad) 変異体における冠水発芽時の嫌気代謝の変化

    髙橋宏和、松村英生、堤伸浩、中園幹生

    第19回日本育種学会 中部地区談話会  2011.12  日本育種学会

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:三重大学   Country:Japan  

  22. イネ実生におけるアルコール脱水素酵素活性の低下による嫌気代謝経路への影響.

    髙橋宏和, 塩野克宏, 長村吉晃, 堤伸浩, 中園幹生

    日本育種学会第119回講演会  2011.3  日本育種学会

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:横浜市立大学   Country:Japan  

  23. Identification of genes affected by a deficiency of ADH1 in submerged coleoptiles of the rice reduced adh activity (rad) mutant using laser microdissection and a microarray. International conference

    Hirokazu Takahashi, Hiroaki Saika, Hideo Matsumura, Yoshiaki Nagamura, Naoko K. Nishizawa, Nobuhiro Tsutsumi and Mikio Nakazono

    9th Conference of the International Society for Plant Anaerobiosis   2007.11 

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    Language:English   Presentation type:Poster presentation  

    Country:Japan  

  24. Suppression of cell division and elongation in coleoptiles of rice reduced adh activity (rad) mutant. International conference

    Hirokazu Takahashi, Hiroaki Saika, Hideo Matsumura, Yoshiaki Nagamura, Naoko K. Nishizawa, Nobuhiro Tsutsumi and Mikio Nakazono.

    The American Society of Plant Biologists  2009.3 

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    Language:English   Presentation type:Poster presentation  

    Country:United States  

  25. Gene expression profiling of coleoptile and plumule in rice during germination under aerobic and anaerobic conditions. International conference

    Hirokazu Takahashi, Yoshiaki Nagamura, Naoko K. Nishizawa, Mikio Nakazono.

    10th International Conference on Plant Anaerobiosis.  2010.6 

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    Language:English   Presentation type:Poster presentation  

    Country:Italy  

  26. Laser Microdissectionを用いたトウモロコシの根の通気組織形成過程で発現する遺伝子の同定. International coauthorship

    髙橋宏和, 渡邊亮介, 大津和弘, 西澤直子, Patrick S. Schnable, 中園幹生

    日本育種学会第110回講演会  2006.9  日本育種学会

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:愛媛大学   Country:Japan  

  27. イネreduced adh activity (rad) 変異体の子葉鞘における網羅的な遺伝子発現解析

    髙橋宏和, 雑賀啓明, 松村英生, 西澤直子, 堤伸浩, 中園幹生

    日本育種学会第111回講演会  2007.3  日本育種学会

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:茨城大学   Country:Japan  

  28. イネの湛水条件下における養水分吸収機構の動態.

    髙橋宏和, 塩野克宏, 長村吉晃, 堤伸浩, 中園幹生

    日本育種学会第113回講演会  2009.3  日本育種学会

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:明治大学   Country:Japan  

  29. Analysis of molecular mechanism of secondary aerenchyma formation in soybean. International conference

    Hirokazu Takahashi, Asako Yanagawa, Yuko Shimizu, Ery O. Fukushima, Susumu Hiraga, Hikaru Seki, Toshiya Muranaka, Satoshi Shimamura, Mikio Nakazono

    11th International Conference on Plant Anaerobiosis  2013.10 

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    Language:English   Presentation type:Oral presentation (general)  

    Country:Philippines  

  30. Analysis of reduced adh activity (rad) mutant. International conference

    Hirokazu Takahashi

    2010.2 

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    Language:English   Presentation type:Oral presentation (general)  

    Country:Australia  

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Research Project for Joint Research, Competitive Funding, etc. 1

  1. ダイズの耐湿性に関与する二次通気組織形成機構の解明とその育種利用に関する研究

    Grant number:20K05969  2020.4 - 2023.3

    高橋 宏和

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\4420000 ( Direct Cost: \3400000 、 Indirect Cost:\1020000 )

KAKENHI (Grants-in-Aid for Scientific Research) 9

  1. ダイズの耐湿性に関わるトリテルペノイドの機能解明とその育種利用に関する基盤研究

    Grant number:23H02182  2023.4 - 2026.3

    科学研究費助成事業  基盤研究(B)

    高橋 宏和, 関 光, 藤 佑志郎

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    Authorship:Principal investigator 

    Grant amount:\18720000 ( Direct Cost: \14400000 、 Indirect Cost:\4320000 )

    ダイズのLupeol synthase1(GmLUS1) 遺伝子が,二次通気組織におけるトリテルペノイドの蓄積に関与し,結果として二次通気組織の酸素輸送能の維持に貢献していることを明らかにしている.しかし,トリテルペノイドは配糖体を含めると非常に多様な化合物で構成されることから,二次通気組織で機能する化合物の実態は不明なままである.そこで本研究課題では,二次通気組織に蓄積するトリテルペノイドを同定し,その局在や機能を明らかにする.また,多数のダイズ品種や異なる植物種の二次通気組織におけるトリテルペノイドを解析することで,トリテルペノイドが耐湿性獲得のために普遍的に重要であることを検証する.

  2. 過湿ストレス下の炭素動態と養水分吸収能を指標としたダイズ根系形態と機能のモデル化

    Grant number:22KK0084  2022.10 - 2025.3

    科学研究費助成事業  国際共同研究加速基金(国際共同研究強化(B))

    高橋 宏和, 野田 祐作, 杉浦 大輔

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    Authorship:Principal investigator 

    Grant amount:\20020000 ( Direct Cost: \15400000 、 Indirect Cost:\4620000 )

    日本においてダイズの耐湿性の向上は,未だ解決されていない長年の課題である.過湿ストレス下において植物の根は真っ先にその影響を受ける器官であることから,耐湿性向上には過湿ストレスに適応できる根系を育種する必要がある.そこで,植物の根が過湿ストレス後の根系形成過程を、これまでのような形態的な特徴だけではなく,①植物体内の生理応答、②根系の再構築,③根系機能の回復の3段階に分けて解析を行い,ダイズの過湿ストレスに対する根系形成を理解する.さらにこれらの情報を利用して,CIRADにおける海外共同研究者と連携して過湿ストレスに対するダイズの根系形成モデルを構築することで,根型育種における問題解決に挑む.
    令和2年度の日本におけるダイズは飼料用も含めるとわずか6%程度となっている.ダイズの生産性が向上しない要因の一つに過湿ストレスが挙げられる.日本においてダイズの耐湿性の向上は,未だ解決されていない長年の課題である.植物の根は,養水分の吸収を担う重要な器官であるとともに,湿害,旱害,塩害,貧栄養などの環境ストレスに真っ先に晒される器官であることから,作物はこのようなストレスに適応するために根系の再構築を行う.そのため,植物が環境ストレス耐性を獲得するためには,根系の改良が重要であり,第二の緑の革命は根型育種において起こると期待されている.そのため,耐湿性向上においても過湿ストレスに適応できる根系を育種する必要がある.そのためには,過湿ストレスに対する根系形成を理解し,根系形成モデル構築し,根型育種のための明確なストラテジーの確立が必要不可欠である.申請者らは,これまでに過湿ストレス下において,根系形態の変化よりもはるかに早く炭素動態を変化させていることを明らかにした.そこで本申請課題では,植物の根が過湿ストレス後の根系形成過程を、これまでのような形態的な特徴だけではなく,①植物体内の生理応答、②根系の再構築,③根系機能の回復の3段階に分けて解析を行い,ダイズの過湿ストレスに対する根系形成を理解する.さらにこれらの情報を利用して,CIRADにおける海外共同研究者と連携して過湿ストレスに対するダイズの根系形成モデルの構築することで,根型育種における問題解決に挑む.
    過湿ストレス,根系形態,炭素動態,水利用効率についてその関連性が明確になりつつあるが,昨年度の電気代高騰により,高崎量子応用研究所におけるポジトロンイメージングが実施できていない.しかし,2023年度においては,解析を行う目処が立っている.また,新型コロナウイルスの影響でCIRADの設備が十分に稼働しておらず,2022年度は栽培実験が行えなかった.しかしこちらも,先方との調整により2023年度は栽培実験が行える時期を確保した。
    2022年度は新型コロナウイルスの影響でCIRADの設備が十分に稼働しておらず,栽培試験を行うことができなかった.しかし,CIRADの共同研究者との調整により2023年度に使用するダイズ系統数を増やし解析を行うこととなった.これにり,9月から1ヶ月間複数のダイズ品種における過湿ストレス下の炭素動態や水利用効率,根系形態を評価する.また,日本における解析においても,引き続き,ダイズにおいて,過湿ストレス,根系形態,炭素動態,水利用効率についてその関連性についての解析を行う.特に,炭素動態は過湿ストレス後30分以内に変化し,過湿ストレス下では炭素輸送が阻害されることが明らかとなり,さらに,ストレス後18時間ごろにこの阻害が一部解除されることが明らかとなった.このことは,本研究課題における過湿ストレス後の根系形成過程には①植物体内の生理応答、②根系の再構築,③根系機能の回復の3段階があるという仮説を支持するものであった.そこで,2023年度は,リアルタイムイメージングを用いてさらに炭素動態を詳細に調査することで,この仮説に関する知見を確かなものにしていく.また,得られた根系形態,炭素動態の情報を用いて根系形成モデルの構築を試験する.

  3. Germination Mechanisms under Iron Toxicity in Direct Seeded Rice on Acid Sulfate Soils

    Grant number:22H02322  2022.4 - 2026.3

    Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (B)

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    Authorship:Coinvestigator(s) 

  4. Intracellular structure and guttation mechanism of hydathodal microhairs in rice

    Grant number:22H02323  2022.4 - 2025.3

    Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (B)

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    Authorship:Coinvestigator(s) 

  5. Function of the programmed cell death in root cortex of soybean

    Grant number:18H02189  2018.4 - 2021.3

    Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (B)

    MOCHIZUKI TOSHIHIRO

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    Waterlogging imposes serious hypoxic stress on the roots of soybean. In this study, the aerenchyma formation and the relationship with root development under hypoxia were evaluated.
    The obtained results showed that root length of Tachinagaha (hypoxia susceptible variety) were greatly decreased under hypoxia, while those of Iyodaizu (hypoxia tolerant variety), and NIL-9-4-5 which have hypoxia tolerant genes derived from Iyodaizu were not affected. Correspondingly, under hypoxia, NIL-9-4-5 exhibited similar aerenchyma formation to Iyodaizu, which was significantly higher compared to Tachinagaha. These results indicate that in response to waterlogging, these genes confer rapid root development through the concomitant formation of aerenchyma.

  6. ダイズの耐湿性に関与する二次通気組織形成機構の解明とその育種利用に関する研究

    Grant number:20K05969  2020.4 - 2023.3

    高橋 宏和

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    Authorship:Principal investigator 

    Grant amount:\4420000 ( Direct Cost: \3400000 、 Indirect Cost:\1020000 )

    ダイズは体内酸素循環に重要な二次通気組織を形成するにも関わらず,耐湿性が低い畑作物である.これは十分な二次通気組織の発達には,1週間以上の期間を要するためである.つまり,ダイズの耐湿性向上には恒常的にあるいは短期間で通気組織を形成させることが必要である.これを達成するためには,二次通気組織の形成機構を解明する必要があるが,これまでその分子機構に関する知見は皆無であった.そこで本研究課題では,組織特異的なトランスクリプトーム解析による二次通気組織形成に関わる遺伝子の情報の蓄積やGWA解析を行うことで,ダイズの耐湿性向上のために二次通気組織形成に重要な遺伝子を探索,同定することを目指す.

  7. Gene tagging using transposable element Tgs1 of Glycine soja in soybean

    Grant number:16K07552  2016.4 - 2019.3

    Takahashi Hirokazu

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    Authorship:Principal investigator 

    Grant amount:\4940000 ( Direct Cost: \3800000 、 Indirect Cost:\1140000 )

    Soybean is one of the important crops, but experimental materials like tag lines or mutant lines are not sufficient. Tgs1 is identified as an active transposable element from Glycine soja. We cultivated the mutant population of tag lines using Tgs1. We selected several mutant lines about some traits, suggesting that these mutant population is useful tools for experimental materials. We also tried to establish the method for the identification of causable gene using transpose tagging.

  8. ダイズの耐湿性形質である二次通気組織に蓄積するトリテルペノイドの機能解明

    Grant number:15H06272  2015.8 - 2016.3

    高橋 宏和

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    Grant amount:\1430000 ( Direct Cost: \1100000 、 Indirect Cost:\330000 )

    ダイズは,土壌中の水分が過剰となる過湿土壌で胚軸や根,根粒といった組織に二次通気組織と呼ばれる白いスポンジ状の組織を形成する.この二次通気組織は,大気中の空気を過湿土壌中の地下部組織へと輸送するための輸送路として機能している.これまでの解析から,ダイズの二次通気組織ではトリテルペノイドの一種であるルペオール,ベツリン,ベツリン酸といいた物資が高蓄積していることが明らかとなっている.そこで本研究では二次通気組織形成時にこれらの物質の蓄積に関与する遺伝子を同定することを試みた.ダイズゲノム中からルペオール合成酵素を2遺伝子,CYP716Aファミリー遺伝子を3遺伝子同定した.これら遺伝子の発現解析を行ったところ,ルペオール合成酵素は1遺伝子が,CYP716Aファミリーの遺伝子は2遺伝子が二次通気組織形成時に高発現していた.これらの遺伝子について組織特異的な発現解析を行ったところ,これらの遺伝子が二次通気組織特異的に高発現していることが明らかとなった.また,これらの遺伝子由来のタンパク質が,ルペオール,ベツリン,ベツリン酸といったトリテルペノイドの合成に関わることも明らかにした.さらに,二次通気組織形成時に発現が誘導される配糖化酵素も同定した.今後は,これら遺伝子の機能解析を行うことで,トリテルペノイドの二次通気組織における役割が明らかになることが期待される.また,遺伝子発現解析に加えて,遺伝解析を行うために二次通気組織を形成するまでの期間が通常の品種よりも早い品種と品種エンレイのF1個体からF2集団を作成した.得られたF2集団を用いてQTL解析を行うことで二次通気組織の早期形成に関わる遺伝子領域の同定とそのダイズ耐湿性への効果が明らかになることが期待される.
    27年度が最終年度であるため、記入しない。
    27年度が最終年度であるため、記入しない。

  9. ダイズの耐湿性形質である二次通気組織に蓄積するトリテルペノイドの機能解明

    2015.4 - 2016.3

    科学研究費補助金  研究活動スタート支援

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Teaching Experience (On-campus) 10

  1. 遺伝学

    2021

  2. 資源生物科学実験実習2

    2021

  3. 資源生物科学実験実習1

    2021

  4. 基礎セミナーA

    2021

  5. 生物学実験

    2021

  6. Plant Breeding

    2020

  7. 修士論文研究4

    2020

  8. 生物学実験

    2020

  9. 資源生物科学実験実習1

    2020

  10. 資源生物科学実験実習2

    2020

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