論文 - TAMA Florence
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Structural differences in the FAD-binding pockets and lid loops of mammalian CRY1 and CRY2 for isoform-selective regulation. 査読有り 国際誌
Miller S, Srivastava A, Nagai Y, Aikawa Y, Tama F, Hirota T
Proceedings of the National Academy of Sciences of the United States of America 118 巻 ( 26 ) 2021年6月
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Reversible modulation of circadian time with chronophotopharmacology. 査読有り 国際誌
Kolarski D, Miró-Vinyals C, Sugiyama A, Srivastava A, Ono D, Nagai Y, Iida M, Itami K, Tama F, Szymanski W, Hirota T, Feringa BL
Nature communications 12 巻 ( 1 ) 頁： 3164 - 3164 2021年5月
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Photopharmacological Manipulation of Mammalian CRY1 for Regulation of the Circadian Clock. 査読有り 国際共著 国際誌
Kolarski D, Miller S, Oshima T, Nagai Y, Aoki Y, Kobauri P, Srivastava A, Sugiyama A, Amaike K, Sato A, Tama F, Szymanski W, Feringa BL, Itami K, Hirota T
Journal of the American Chemical Society 143 巻 ( 4 ) 頁： 2078 - 2087 2021年2月
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Reconstruction of Three-Dimensional Conformations of Bacterial ClpB from High-Speed Atomic-Force-Microscopy Images. 査読有り 国際誌
Dasgupta B, Miyashita O, Uchihashi T, Tama F
Frontiers in molecular biosciences 8 巻 頁： 704274 - 704274 2021年
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How CRY Regulates the Clock: Structural Studies of a Dynamic Mammalian Circadian Complex
Sandate C., Fribourgh J., Michael A., Srivastava A., Hura G., Schneidman-Duhovny D., Tripathi S., Takahashi J., Lander G., Hirota T., Tama F., Partch C.
ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES 76 巻 頁： A122 - A122 2020年8月
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Isoform-selective regulation of mammalian cryptochromes. 査読有り 国際誌
Miller S, Son YL, Aikawa Y, Makino E, Nagai Y, Srivastava A, Oshima T, Sugiyama A, Hara A, Abe K, Hirata K, Oishi S, Hagihara S, Sato A, Tama F, Itami K, Kay SA, Hatori M, Hirota T
Nature chemical biology 16 巻 ( 6 ) 頁： 676 - 685 2020年6月
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Computational Protocol for Assessing the Optimal Pixel Size to Improve the Accuracy of Single-particle Cryo-electron Microscopy Maps. 査読有り 国際共著 国際誌
Tiwari SP, Chhabra S, Tama F, Miyashita O
Journal of chemical information and modeling 60 巻 ( 5 ) 頁： 2570 - 2580 2020年5月
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Integrative/Hybrid Modeling Approaches for Studying Biomolecules. 査読有り 国際誌
Srivastava A, Tiwari SP, Miyashita O, Tama F
Journal of molecular biology 432 巻 ( 9 ) 頁： 2846 - 2860 2020年4月
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Dynamics at the serine loop underlie differential affinity of cryptochromes for CLOCK:BMAL1 to control circadian timing. 査読有り 国際誌
Fribourgh JL, Srivastava A, Sandate CR, Michael AK, Hsu PL, Rakers C, Nguyen LT, Torgrimson MR, Parico GCG, Tripathi S, Zheng N, Lander GC, Hirota T, Tama F, Partch CL
eLife 9 巻 2020年2月
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Conformational ensemble of an intrinsically flexible loop in mitochondrial import protein Tim21 studied by modeling and molecular dynamics simulations. 査読有り 国際誌
Srivastava A, Bala S, Motomura H, Kohda D, Tama F, Miyashita O
Biochimica et biophysica acta. General subjects 1864 巻 ( 2 ) 頁： 129417 - 129417 2020年2月
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Crystal contact-free conformation of an intrinsically flexible loop in protein crystal: Tim21 as the case study. 査読有り 国際誌
Bala S, Shinya S, Srivastava A, Ishikawa M, Shimada A, Kobayashi N, Kojima C, Tama F, Miyashita O, Kohda D
Biochimica et biophysica acta. General subjects 1864 巻 ( 2 ) 頁： 129418 - 129418 2020年2月
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Reconstruction of low-resolution molecular structures from simulated atomic force microscopy images. 査読有り 国際誌
Dasgupta B, Miyashita O, Tama F
Biochimica et biophysica acta. General subjects 1864 巻 ( 2 ) 頁： 129420 - 129420 2020年2月
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Structure determination using high-order spatial correlations in single-particle X-ray scattering 査読有り 国際誌
Zhao, WY; Miyashita, O; Nakano, M; Tama, F
IUCRJ 11 巻 ( Pt 1 ) 頁： 92 - 108 2024年1月
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Controlling the Circadian Clock with High Temporal Resolution through Photodosing 査読有り 国際誌
Kolarski Dusan, Sugiyama Akiko, Breton Ghislain, Rakers Christin, Ono Daisuke, Schulte Albert, Tama Florence, Itami Kenichiro, Szymanski Wiktor, Hirota Tsuyoshi, Feringa Ben L.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 141 巻 ( 40 ) 頁： 15784 - 15791 2019年10月
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Bipartite anchoring of SCREAM enforces stomatal initiation by coupling MAP kinases to SPEECHLESS 査読有り
Putarjunan Aarthi, Ruble Jim, Srivastava Ashutosh, Zhao Chunzhao, Rychel Amanda L., Hofstetter Alex K., Tang Xiaobo, Zhu Jian-Kang, Tama Florence, Zheng Ning, Torii Keiko U.
NATURE PLANTS 5 巻 ( 7 ) 頁： 742 - 754 2019年7月
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Cryo-Cooling Effect on DHFR Crystal Studied by Replica-Exchange Molecular Dynamics Simulations 査読有り
Nagai Tetsuro, Tama Florence, Miyashita Osamu
BIOPHYSICAL JOURNAL 116 巻 ( 3 ) 頁： 395 - 405 2019年2月
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Acceleration of cryo-EM Flexible Fitting for Large Biomolecular Systems by Efficient Space Partitioning 査読有り
Mori Takaharu, Kulik Marta, Miyashita Osamu, Jung Jaewoon, Tama Florence, Sugita Yuji
STRUCTURE 27 巻 ( 1 ) 頁： 161 - + 2019年1月
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Computational investigation of the conformational dynamics in Tom20-mitochondrial presequence tethered complexes 査読有り
Srivastava Arpita, Tama Florence, Kohda Daisuke, Miyashita Osamu
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 87 巻 ( 1 ) 頁： 81 - 90 2019年1月
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Cell-based screen identifies a new potent and highly selective CK2 inhibitor for modulation of circadian rhythms and cancer cell growth 査読有り 国際誌
Oshima Tsuyoshi, Niwa Yoshimi, Kuwata Keiko, Srivastava Ashutosh, Hyoda Tomoko, Tsuchiya Yoshiki, Kumagai Megumi, Tsuyuguchi Masato, Tamaru Teruya, Sugiyama Akiko, Ono Natsuko, Zolboot Norjin, Aikawa Yoshiki, Oishi Shunsuke, Nonami Atsushi, Arai Fumio, Hagihara Shinya, Yamaguchi Junichiro, Tama Florence, Kunisaki Yuya, Yagita Kazuhiro, Ikeda Masaaki, Kinoshita Takayoshi, Kay Steve A., Itami Kenichiro, Hirota Tsuyoshi
SCIENCE ADVANCES 5 巻 ( 1 ) 頁： eaau9060 2019年1月
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Parameter optimization for 3D-reconstruction from XFEL diffraction patterns based on Fourier slice matching 査読有り
Nakano Miki, Miyashita Osamu, Tama Florence
BIOPHYSICS AND PHYSICOBIOLOGY 16 巻 頁： 367 - 376 2019年