Updated on 2022/04/12

写真a

 
NISHIUCHI Shunsaku
 
Organization
Graduate School of Bioagricultural Sciences Field Science Center Division Assistant Professor
Graduate School
Graduate School of Bioagricultural Sciences
Undergraduate School
School of Agricultural Sciences Department of Bioresource Sciences
Title
Assistant Professor
Contact information
メールアドレス
External link

Degree 3

  1. 博士 (農学) ( 2010.3   東京大学 ) 

  2. 修士 (農学) ( 2007.3   東京大学 ) 

  3. 学士 (農学) ( 2005.3   東京大学 ) 

Research Interests 6

  1. リモートセンシング

  2. 情報通信技術

  3. 育種

  4. スマート農業

  5. リモートセンシング

  6. スマート農業

Research Areas 4

  1. Environmental Science/Agriculture Science / Science in plant genetics and breeding

  2. Environmental Science/Agriculture Science / Agricultural environmental engineering and agricultural information engineering

  3. Environmental Science/Agriculture Science / Crop production science

  4. Environmental Science/Agriculture Science / Crop production science

Current Research Project and SDGs 2

  1. 先端技術による農業支援

  2. 圃場バイオマス評価技術の開発と利用

Research History 4

  1. Nagoya University   Assistant Professor

    2014.8

  2. Nagoya University   Assistant Professor

    2014.8

  3. 日本学術振興会特別研究員(PD)

    2013.4 - 2014.7

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    Country:Japan

  4. 研究員

    2010.4 - 2011.3

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    Country:Japan

Education 3

  1. The University of Tokyo   Graduate School, Division of Agricultural Science

    2007.4 - 2010.3

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    Country: Japan

  2. The University of Tokyo   Graduate School, Division of Agricultural Science

    2005.4 - 2007.3

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    Country: Japan

  3. The University of Tokyo   Faculty of Agriculture

    2001.4 - 2005.3

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    Country: Japan

Professional Memberships 1

  1. 日本育種学会

Committee Memberships 2

  1. 一般社団法人日本育種学会   男女共同参画推進委員会 委員  

    2020.3 - 2022.3   

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    Committee type:Academic society

  2. 一般社団法人日本育種学会   男女共同参画推進委員会 委員  

    2020.3 - 2022.3   

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    Committee type:Academic society

Awards 2

  1. 日本育種学会優秀発表賞

    2014.3   日本育種学会  

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    Country:Japan

  2. 日本育種学会優秀発表賞

    2012.9   日本育種学会  

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    Country:Japan

 

Papers 31

  1. WUSCHEL-related homeobox family genes in rice control lateral root primordium size Reviewed

    Kawai Tsubasa, Shibata Kyosuke, Akahoshi Ryosuke, Nishiuchi Shunsaku, Takahashi Hirokazu, Nakazono Mikio, Kojima Takaaki, Nosaka-Takahashi Misuzu, Sato Yutaka, Toyoda Atsushi, Lucob-Agustin Nonawin, Kano-Nakata Mana, Suralta Roel R., Niones Jonathan M., Chen Yinglong, Siddique Kadambot H. M., Yamauchi Akira, Inukai Yoshiaki

    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA   Vol. 119 ( 1 )   2022.1

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    Language:Japanese   Publishing type:Research paper (scientific journal)   Publisher:Proceedings of the National Academy of Sciences of the United States of America  

    The development of a plastic root system is essential for stable crop production under variable environments. Rice plants have two types of lateral roots (LRs): S-type (short and thin) and L-type (long, thick, and capable of further branching). LR types are determined at the primordium stage, with a larger primordium size in L-types than S-types. Despite the importance of LR types for rice adaptability to variable water conditions, molecular mechanisms underlying the primordium size control of LRs are unknown. Here, we show that two WUSCHEL-related homeobox (WOX) genes have opposing roles in controlling LR primordium (LRP) size in rice. Root tip excision on seminal roots induced L-type LR formation with wider primordia formed from an early developmental stage. QHB/OsWOX5 was isolated as a causative gene of a mutant that is defective in S-type LR formation but produces more L-type LRs than wild-type (WT) plants following root tip excision. A transcriptome analysis revealed that OsWOX10 is highly up-regulated in L-type LRPs. OsWOX10 overexpression in LRPs increased the LR diameter in an expression-dependent manner. Conversely, the mutation in OsWOX10 decreased the L-type LR diameter under mild drought conditions. The qhb mutants had higher OsWOX10 expression than WT after root tip excision. A yeast one-hybrid assay revealed that the transcriptional repressive activity of QHB was lost in qhb mutants. An electrophoresis mobility shift assay revealed that OsWOX10 is a potential target of QHB. These data suggest that QHB represses LR diameter increase, repressing OsWOX10. Our findings could help improve root system plasticity under variable environments.

    DOI: 10.1073/pnas.2101846119

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  2. Expression analysis of genes for cytochrome P450 CYP86 and glycerol-3-phosphate acyltransferase related to suberin biosynthesis in rice roots under stagnant deoxygenated conditions Reviewed

    Nishiuchi Shunsaku, Watanabe Kohtaro, Sato Saori, Takahashi Hirokazu, Nakazono Mikio

    Plant Root   Vol. 15 ( 0 ) page: 19 - +   2021.6

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    Language:Japanese   Publishing type:Research paper (scientific journal)   Publisher:Japanese Society for Root Research  

    <p>The radial oxygen loss (ROL) barrier formed on the outer cell layers of roots of rice (<i>Oryza sativa</i>) contributes to efficient oxygen transfer through the aerenchyma from the aerial parts to the root apex. It is hypothesized that suberin accumulation in the exodermis contributes to an apoplastic barrier and plays a vital role in ROL barrier formation. A previous study reported that some genes encoding cytochrome P450 family 86 (<i>CYP86</i>) and glycerol-3-phosphate acyltransferase (<i>GPAT</i>) might be involved in suberin biosynthesis during ROL barrier development of rice roots. However, how these genes are expressed and their contribution to the sequential development of suberin accumulation in rice roots remains unclear. In this study, four <i>CYP86</i> and five <i>GPAT</i> genes of rice were identified as candidate genes involved in suberin biosynthesis in roots using sequence homology alignment with <i>Arabidopsis</i> suberin and cutin biosynthesis genes. Gene expression analyses revealed that expression of the candidate genes was induced at the region where suberin biosynthesis occurred under stagnant deoxygenated conditions. These genes showed two types of spatiotemporal expression patterns, at the regions of 5–25 mm and 25–35 mm from the root apex. Tissue-specific expression analyses using laser microdissection and histochemical GUS staining revealed that candidate gene expression was similar in the cell layer of the root exodermis. These results suggest that the selected <i>CYP86</i> and <i>GPAT</i> genes are involved in suberin biosynthesis in the exodermis, and that suberin biosynthesis in the root may be controlled by the spatiotemporal expression of two groups of genes.</p>

    DOI: 10.3117/plantroot.15.19

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    CiNii Research

  3. Development of an Aus-Derived Nested Association Mapping (Aus-NAM) Population in Rice Reviewed

    Kitony Justine K., Sunohara Hidehiko, Tasaki Mikako, Mori Jun-Ichi, Shimazu Akihisa, Reyes Vincent P., Yasui Hideshi, Yamagata Yoshiyuki, Yoshimura Atsushi, Yamasaki Masanori, Nishiuchi Shunsaku, Doi Kazuyuki

    PLANTS-BASEL   Vol. 10 ( 6 )   2021.6

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    Language:Japanese   Publishing type:Research paper (scientific journal)   Publisher:Plants  

    A genetic resource for studying genetic architecture of agronomic traits and environmental adaptation is essential for crop improvements. Here, we report the development of a rice nested association mapping population (aus-NAM) using 7 aus varieties as diversity donors and T65 as the common parent. Aus-NAM showed broad phenotypic variations. To test whether aus-NAM was useful for quantitative trait loci (QTL) mapping, known flowering genes (Ehd1, Hd1, and Ghd7) in rice were characterized using single-family QTL mapping, joint QTL mapping, and the methods based on genome-wide association study (GWAS). Ehd1 was detected in all the seven families and all the methods. On the other hand, Hd1 and Ghd7 were detected in some families, and joint QTL mapping and GWAS-based methods resulted in weaker and uncertain peaks. Overall, the high allelic variations in aus-NAM provide a valuable genetic resource for the rice community.

    DOI: 10.3390/plants10061255

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  4. Marker-Assisted Introgression and Stacking of Major QTLs Controlling Grain Number (Gn1a) and Number of Primary Branching (WFP) to NERICA Cultivars Reviewed

    Vincent P. Reyes, Rosalyn B. Angeles-Shim, Merlyn S. Mendioro, Ma. Carmina C. Manuel, Ruby S. Lapis, Junghyun Shim, Hidehiko Sunohara, Shunsaku Nishiuchi, Mayumi Kikuta, Daigo Makihara, Kshirod K. Jena, Motoyuki Ashikari, Kazuyuki Doi

    Plants   Vol. 10 ( 5 ) page: 844 - 844   2021.5

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    Language:Japanese   Publishing type:Research paper (scientific journal)   Publisher:MDPI AG  

    The era of the green revolution has significantly improved rice yield productivity. However, with the growing population and decreasing arable land, rice scientists must find new ways to improve rice productivity. Although hundreds of rice yield-related QTLs were already mapped and some of them were cloned, only a few were utilized for actual systematic introgression breeding programs. In this study, the major yield QTLs Grain Number 1a (Gn1a) and Wealthy Farmer’s Panicle (WFP) were introgressed and stacked in selected NERICA cultivars by marker-assisted backcross breeding (MABB). The DNA markers RM3360, RM3452, and RM5493 were used for foreground selection. At BC3F4 and BC3F5 generation, a combination of marker-assisted selection and phenotypic evaluation were carried out to select lines with target alleles and traits. Further, genotyping-by-sequencing (GBS) was conducted to validate the introgression and determine the recurrent parent genome recovery (RPGR) of the selected lines. The Gn1a and/or WFP introgression lines showed significantly higher numbers of spikelets per panicle and primary branching compared to the recurrent parents. In addition, lines with Gn1a and/or WFP alleles were comparatively similar to the recurrent parents (RP) in most yield-related traits. This study demonstrates the success of utilizing yield QTLs and marker-assisted selection to develop and improve rice cultivars.

    DOI: 10.3390/plants10050844

    Web of Science

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  5. Mutation of OUR1/OsbZIP1, which encodes a member of the basic leucine zipper transcription factor family, promotes root development in rice through repressing auxin signaling. Reviewed

    Tomomi Hasegawa, Nonawin Lucob-Agustin, Koki Yasufuku, Takaaki Kojima, Shunsaku Nishiuchi, Atsushi Ogawa, Misuzu Takahashi-Nosaka, Mana Kano-Nakata, Mayuko Inari-Ikeda, Moeko Sato, Hiroyuki Tsuji, Cornelius Mbathi Wainaina, Akira Yamauchi, Yoshiaki Inukai.

    Plant Science     2021.2

  6. QTL analysis for carbon assimilate translocation-related traits during maturity in rice (<i>Oryza sativa</i> L.) Reviewed

    Phung Huan Danh, Sugiura Daisuke, Sunohara Hidehiko, Makihara Daigo, Kondo Motohiko, Nishiuchi Shunsaku, Doi Kazuyuki

    Breeding Science   Vol. 69 ( 2 ) page: 289-296   2019.6

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    Language:English   Publishing type:Research paper (scientific journal)  

    <p>Problems with carbon assimilate translocation from source organs to sink (grains) during ripening cause yield losses in rice (<i>Oryza sativa</i> L.), especially in high-sink-capacity varieties. We conducted a genetic analysis of traits related to such translocation by using recombinant inbred lines. Shoot weight (SW) of T65, a <i>japonica</i> parent, was retained from heading to late maturity, whereas that of DV85, an <i>aus</i> parent, was greater than that of T65 at 5 days after heading (DAH) and then decreased until 20 DAH. This difference was observed clearly under standard-fertilizer but not low-fertilizer conditions. Non-structural carbohydrate (NSC) contents in the parents showed a tendency similar to that for SW. QTL analysis revealed pleiotropic QTLs on chromosomes 5 and 10, probably by associations with heading date QTLs. A QTL associated with harvest index and NSC at 5 DAH was detected on chromosome 1. By considering the temporal changes of the traits, we found a QTL for decrease in SW on chromosome 11; the DV85 allele of this QTL facilitated assimilate translocation and suppressed biomass growth. A suggestive QTL for NSC decrease was located on chromosome 2. These QTLs could represent potential targets for controlling carbon assimilate translocation in breeding programs.</p>

    DOI: 10.1270/jsbbs.18203

    Web of Science

  7. Study of Income Risk of Rice Agricultural Farm Reviewed

    IDEI Kana, KAMINO Etsutaro, TSUGE Ayaka, NISHIUCHI Shunsaku, OTAGAKI Shungo, MATSUMOTO Shogo

    The Proceedings of Design & Systems Conference   Vol. 2018 ( 0 ) page: 2415   2018.11

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:The Japan Society of Mechanical Engineers  

    The agriculture farmer income strongly depends on the weather conditions. Therefore, the income risk evaluation is very important for sustainable development of agricultural business. The aim of this study is to evaluate the income risk in the rice cultivation farmer. The income, which is defined as the product of the yield and the quality, is predicted by using Deep Neural Network. Then, the value at risk (VaR) in the income is evaluated by Monte Carlo simulation. The result is compared with the value at the real data.

    DOI: 10.1299/jsmedsd.2018.28.2415

    CiNii Research

  8. Prediction of Rice Heading Day by Using Machine Learning Reviewed

    MAEDA Yuichiro, KAMINO Etsutaro, GOYODANI Taichi, NISHIUCHI Shunsaku, KITA Eisuke

    The Proceedings of Design & Systems Conference   Vol. 2018 ( 0 ) page: 2412   2018.11

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:The Japan Society of Mechanical Engineers  

    The aim of this study is to predict the heading day of rice by using machine learning. The heading day denotes the blooming day in the rice cultivation, which is one of the important days in the rice cultivation stage. The number of days from the planting day to the heading day is taken as the objective variable. The cultivation variables such as the weather data, the position of the field and so on are taken as the explanatory variables. The prediction model is defined by using Xgboost algorithm. The prediction model showed that the average error is 3.19 days.

    DOI: 10.1299/jsmedsd.2018.28.2412

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  9. Design of Rice Cultivation Schedule Reviewed

    IDEI Kana, KAMINO Etsutaro, MAEDA Yuichiro, SUGAI Tomotaka, NISHIUCHI Shunsaku, KITA Eisuke

    The Proceedings of Design & Systems Conference   Vol. 2018 ( 0 ) page: 2414   2018.11

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:The Japan Society of Mechanical Engineers  

    The schedule prediction in the rice cultivation is very important for controlling the cultivation process and then, for enhancing the farmer's income. The aim of this study is to predict the planting and the reaping days in the rice cultivation from the weather data by using the multiple linear regression analysis. The yield and the quality of the rice cultivation are also predicted from the weather data. The rice cultivation farmer's income is maximized by changing the heading and the reaping days in the rice cultivation. The algorithms are applied for Koshihikari and Aichinokaori in Aichi Prefecture in order to discuss the effectiveness of the present algorithms.

    DOI: 10.1299/jsmedsd.2018.28.2414

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  10. Analysis of the rrl3 mutants reveals the importance of arginine biosynthesis in the maintenance of root apical meristem in rice Reviewed

    Shelley, I. J, Watanabe, S, Ozaki, H, Nagasawa, N, Ogawa, A, Takahashi-Nosaka, M, Nishiuchi, S, Yamauchi, A, Kitano, H, Inukai, Y

    Journal of Plant Studies   Vol. 7   page: 36-46   2018.2

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  11. OsPIN2, which encodes a member of the auxin efflux carrier proteins, is involved in root elongation growth and lateral root formation patterns via the regulation of auxin distribution in rice. Reviewed

    Inahashi H, Shelley IJ, Yamauchi T, Nishiuchi S, Takahashi-Nosaka M, Matsunami M, Ogawa A, Noda Y, Inukai Y

    Physiologia plantarum     2018.2

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/ppl.12707

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  12. Environmental Design in Rice Cultivation Reviewed

    KAMINO Etsutaro, NISHIUCHI Shunsaku, KITA Eisuke

    The Proceedings of Design & Systems Conference   Vol. 2018 ( 0 ) page: 2413   2018

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:The Japan Society of Mechanical Engineers  

    The aim of this study is to design the cultivation environment scenario in the rice plant cultivation by using data mining technique and optimization algorithm. The use of the multi-layer neural network model predicts the yield and the quality in the rice cultivation. As the objective function, the income is defined as the product of the yield and the quality. The scenario of the daily average temperature is changed in order to maximize the objective function. The result shows that the daily temperature in Nagoya is too high for the rice Oryza sativa 'Koshihikari'.

    DOI: 10.1299/jsmedsd.2018.28.2413

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  13. A major locus involved in the formation of the radial oxygen loss barrier in adventitious roots of teosinte Zea nicaraguensis is located on the short-arm of chromosome 3 Reviewed

    Watanabe Kohtaro, Takahashi Hirokazu, Sato Saori, Nishiuchi Shunsaku, Omori Fumie, Malik Al Imran, Colmer Timothy David, Mano Yoshiro, Nakazono Mikio

    PLANT CELL AND ENVIRONMENT   Vol. 40 ( 2 ) page: 304-316   2017.1

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/pce.12849

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  14. Prediction in Rice Plant Cultivation and its Application Reviewed

    KAWABE Etsutaro, KUBO Nazomu, NISHIUCHI Shunsuke, KITANO Hidemi, KITA Eisuke

    The Proceedings of The Computational Mechanics Conference   Vol. 2017 ( 0 ) page: 018   2017

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:The Japan Society of Mechanical Engineers  

    The aim of this study is to design the cultivation environment scenario in the rice plant cultivation. The use of the neural network determines the prediction model which predicts the yield and the quality of the rice from the environmental scenario. The objective function, which is defined from the yield and the quality, is maximized by changing the scenario of the daily average temperature. The result shows that the temperature before the heading date in Nagoya is too high for the rice Oryza sativa &rsquo;Koshihikari&rsquo;.

    DOI: 10.1299/jsmecmd.2017.30.018

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  15. イネの生育予測精度向上を目指した農業情報の利用 Reviewed

    近藤 拓也, 西内 俊策

    人工知能学会全国大会論文集   Vol. 2017 ( 0 ) page: 2E4OS36b2-2E4OS36b2 - 2E4OS36b2   2017

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:一般社団法人 人工知能学会  

    <p>本研究は、手軽な農業ITとして普及が期待されるオンサイト圃場情報を利用することで、イネの収量と品質の両立を前提とした栽培管理を支援することを目的とします。本発表ではこれまでに記録された日本各地のイネ栽培レコードをどの様に用いるか、その手法について検討を行い、農業現場において重要なイネの出穂予測精度の向上に繋がるかどうか検証を行います。</p>

    DOI: 10.11517/pjsai.JSAI2017.0_2E4OS36b2

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  16. A dynamic e-crop calendar for improving rice cultivation efficiency Reviewed

    Kameoka Emi, Kitano Hidemi, Nishiuchi Shunsaku

    Abstracts of Meeting of the CSSJ   Vol. 241 ( 0 ) page: 26   2016

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:CROP SCIENCE SOCIETY OF JAPAN  

    DOI: 10.14829/jcsproc.241.0_26

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  17. RCN1/OsABCG5, an ATP-binding cassette (ABC) transporter, is required for hypodermal suberization of roots in rice (Oryza sativa) Reviewed

    Shiono, Katsuhiro and ANDO, Miho and Nishiuchi, Shunsaku and Takahashi, Hirokazu and Watanabe, Kohtaro and NAKAMURA, Motoaki and MATSUO, Yuichi and Yasuno, Naoko and Yamanouchi, Utako and FUJIMOTO, Masaru and Takanashi, Hideki and Ranathunge, Kosala and Franke, Rochus B and SHITAN, Nobukazu and Nishizawa, Naoko K and Takamure, Itsuro and Yano, Masahiro and Tsutsumi, Nobuhiro and Schreiber, Lukas and Yazaki, Kazufumi and Nakazono, Mikio and Kato, Kiyoaki

    The Plant Journal     page: n/a--n/a   2014

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/tpj.12614

  18. {Does suberin accumulation in plant roots contribute to waterlogging tolerance? Reviewed

    Watanabe, Kohtaro and Nishiuchi, Shunsaku and Kulichikhin, Konstantin and Nakazono, Mikio

    Frontiers in plant science   Vol. 4   page: 178   2013

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.3389/fpls.2013.00178

  19. {SLL1, which encodes a member of the stearoyl-acyl carrier protein fatty acid desaturase family, is involved in cell elongation in lateral roots via regulation of fatty acid content in rice Reviewed

    Shelley, Israt Jahan and Nishiuchi, Shunsaku and Shibata, Kyosuke and Inukai, Yoshiaki

    Plant Science   Vol. 207   page: 12--17   2013

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.plantsci.2013.01.003

  20. [Tissue specific expression of metallothionein gene during aerenchyma formation]. Reviewed

    Yamauchi T, Nishiuchi S, Nakazono M

    Seikagaku. The Journal of Japanese Biochemical Society   Vol. 84 ( 10 ) page: 857-62   2012.10

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    PubMed

  21. {[Tissue specific expression of metallothionein gene during aerenchyma formation]. Reviewed

    Yamauchi, T and Nishiuchi, Shunsaku and Nakazono, Mikio

    Seikagaku The Journal of {\ldots   Vol. 84 ( 10 ) page: 857--862   2012

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  22. {Mechanisms for coping with submergence and waterlogging in rice Reviewed

    Nishiuchi, Shunsaku and Yamauchi, Takaki and Takahashi, Hirokazu and Kotula, Lukasz and Nakazono, Mikio

    Rice   Vol. 5 ( 1 ) page: 1--14   2012

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1186/1939-8433-5-2

  23. Identification of an ATP-binding cassette (ABC) transporter that is required for formation of suberin lamellae and the apoplastic barrier at the hypodermis in rice (Oryza sativa) Reviewed

    SHIONO Katsuhiro, ANDO Miho, NAKAMURA Motoaki, MATSUO Yuichi, YASUNO Naoko, TAKAHASHI Hirokazu, NISHIUCHI Shunsaku, FUJIMOTO Masaru, TAKANASHI Hideki, RANATHUNGE Kosala, FRANKE Rochus, SHITAN Nobukazu, NISHIZAWA Naoko K, TAKAMURE Itsuro, TSUTSUMI Nobuhiro, SCHREIBER Lukas, YAZAKI Kazufumi, NAKAZONO Mikio, KATO Kiyoaki

      Vol. 20 ( 5 ) page: 193   2011.12

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  24. Ectopic Expression of the K+ Channel β Subunits from Puccinellia tenuiflora (KPutB1) and Rice (KOB1) Alters K+ Homeostasis of Yeast and Arabidopsis Reviewed

    Sintho Wahyuning Ardie, Shunsaku Nishiuchi, Shenkui Liu, and Tetsuo Takano

    Mol. Biotechnol.     2010.11

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s12033-010-9349-3

  25. Identification of genes expressed in maize root cortical cells during lysigenous aerenchyma formation using laser microdissection and microarray analyses. Reviewed

    Imene Rajhi*, Takaki Yamauchi*, Hirokazu Takahashi, Shunsaku Nishiuchi, Katsuhiro Shiono, Ryosuke Watanabe, Ahmed Mliki, Yoshiaki Nagamura, Nobuhiro Tsutsumi, Naoko K. Nishizawa and Mikio Nakazono

    New Phytologist     2010.11

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s11103-007-9133-3

  26. {Analysis of expressed sequence tags from a NaHCO(3)-treated alkali-tolerant plant, Chloris virgata. Reviewed

    Nishiuchi, Shunsaku and Fujihara, Kazumasa and Shennkui, Liu and Takano, Tetsuo

    Plant physiology and biochemistry : PPB / Soci{\'e   Vol. 48 ( 4 ) page: 247--255   2010

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.plaphy.2010.01.024

  27. Characterization of two plasma membrane protein 3 genes (PutPMP3) from the alkali grass, Puccinellia tenuiflora, and functional comparison of the rice homologues, OsLti6a/b from rice Reviewed

    Zhang Chang-Qing, Shunsaku Nishiuchi, Liu Shenkui, and Takano Tetsuo

    BMB Reports   Vol. 41 ( 6 ) page: 448-454   2008.6

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    Language:English   Publishing type:Research paper (scientific journal)  

  28. Expression of an NADP-malic enzyme gene in rice (Oryza sativa. L) is induced by environmental stresses; over-expression of the gene in Arabidopsis confers salt and osmotic stress tolerance. Reviewed

    Shenkui Liu, Yuxiang Cheng, Xinxin Zhang, Qingjie Guan, Shunsaku Nishiuchi, Kenichi Hase, and Tetsuo Takano

    Plant Mol Biol     2007.1

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s11103-007-9133-3

  29. {The Relationship of Arabidopsis thaliana Thioredoxin M-type 1 (AtTRX m1)Gene with Environmental Stress Reviewed

    Dexi, Xia and Qingjie, Guan and shumei, jin and Yujia, Li and Han, Liang and XinXin, Zhang and Nishiuchi, Shunsaku and Takano, Tetsuo and Shenkui, Liu

    Molecular Plant Breeding   Vol. 5 ( 1 ) page: 21--26   2007

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    Language:Chinese   Publishing type:Research paper (scientific journal)  

  30. {Isolation and characterization of a metallothionein-1 protein in Chloris virgata Swartz that enhances stress tolerances to oxidative, salinity and carbonate stress in Saccharomyces cerevisiae. Reviewed

    Nishiuchi, Shunsaku and Shennkui, Liu and Takano, Tetsuo

    Biotechnology Letters   Vol. 29 ( 8 ) page: 1301--1305   2007

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s10529-007-9396-4

  31. {Expression of Rice OsAPX1 Gene and its Salt Tolerance in Tobacco Reviewed

    Guan, Qingjie and Qiuxiang, Luo and Dexi, Xia and Yaowen, Li and Han, Liang and XinXin, Zhang and Nishiuchi, Shunsaku and Takanoo, Tetsuo and Shennkui, Liu

    Molecular Plant Breeding   Vol. 5 ( 1 ) page: 1--7   2007

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    Language:Chinese   Publishing type:Research paper (scientific journal)  

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MISC 7

  1. Ionomic analysis of leaves of Japanese rice cultivars grown in non-fertilized paddy field

    森拓也, 長谷川昂平, 天野真宏, 斉木真紀, 西内俊策, 村瀬潤, 神谷岳洋, 藤原徹, 松岡信, 高橋宏和, 中園幹生

    育種学研究   Vol. 23   2021

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  2. 台中65号とLijiangxintuanheigu(LTH)の交雑で見出されたイネの新規F<sub>2</sub>弱勢遺伝子hwj1とhwj2

    國枝真依, 鈴木竜, 田崎三香子, 西内俊策, 西内俊策, 土井一行, 春原英彦

    育種学研究   Vol. 20   page: 247   2018.3

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    Language:Japanese   Publishing type:Rapid communication, short report, research note, etc. (scientific journal)  

    J-GLOBAL

  3. イネ品種DadahupとMilyang23を用いた鉄過剰耐性形質に関するQTL解析

    平川嵩久, 高橋宏和, 西内俊策, 春原英彦, 村瀬潤, 土井一行, 犬飼義明, 中園幹生

    育種学研究   Vol. 18   page: 22   2016.3

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    Language:Japanese  

    J-GLOBAL

  4. 長期有機物連用圃場の植物病害抑止性と微生物叢

    村瀬潤, 西内俊策, 亀岡笑, 田原保樹, 日置真優, 伊達康博, 菊地淳, 北野英己, 柘植尚志

    日本植物病理学会大会プログラム・講演要旨予稿集   Vol. 2016   page: 87   2016.3

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    Language:Japanese   Publishing type:Rapid communication, short report, research note, etc. (scientific journal)  

    J-GLOBAL

  5. P3-1-13 異なる有機物資材の長期施用が畑土壌の細菌群集に及ぼす影響(ポスター,3-1 土壌生物の生態と機能,2015年度京都大会)

    村瀬 潤, 田原 保樹, 日置 真優, 西内 俊策, 北野 英己, 柘植 尚志

    日本土壌肥料学会講演要旨集   Vol. 61 ( 0 )   2015

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    Language:Japanese   Publishing type:Rapid communication, short report, research note, etc. (scientific journal)   Publisher:一般社団法人 日本土壌肥料学会  

  6. テオシントが持つ根に関する耐湿性関連形質を導入したトウモロコシ系統の作出

    間野吉郎, 大森史恵, 玉置宏之, 黄川田智洋, 高橋亘, 三ツ橋昇平, 佐藤尚, 渡邊宏太郎, 西内俊策, 中園幹生

    根の研究   Vol. 23 ( 4 ) page: 119   2014.12

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    Language:Japanese   Publishing type:Rapid communication, short report, research note, etc. (scientific journal)  

  7. 植物の通気組織形成過程におけるメタロチオネインの組織特異的な発現制御. Invited Reviewed

    山内卓樹, 西内俊策, 中園幹生

    生化学   Vol. 84 ( 10 ) page: 857 - 862   2012.10

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    Language:Japanese   Publishing type:Article, review, commentary, editorial, etc. (scientific journal)  

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Presentations 1

  1. 衛星リモートセンシングを用いた茎立期におけるコムギのNDVI変化の予測

    日本育種学会 第141回講演会  2022.3.20 

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    Event date: 2022.3

    Language:Japanese   Presentation type:Oral presentation (general)  

    Country:Japan  

Research Project for Joint Research, Competitive Funding, etc. 3

  1. Development of data API and application for agricultural use of large-scale satellite data

    Grant number:IDEAS202101  2021.6 - 2022.3

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\550000 ( Direct Cost: \550000 )

  2. Development of data API and application for agricultural use of large-scale satellite data

    Grant number:IDEAS202001  2020.7 - 2021.3

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\600000 ( Direct Cost: \600000 )

  3. 育種ビッグデータの整備および情報解析技術を活用した高度育種システムの開発

    2018.10 - 2023.3

    戦略的プロジェクト研究推進事業 

    米丸 淳一

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    Grant type:Competitive

KAKENHI (Grants-in-Aid for Scientific Research) 6

  1. デジタル基盤上のウシ体内フローラと草地管理の最適化による地域バリューチェーン創出プロジェクト(条件付採択)

    2021.6 - 2022.3

    令和3年度 国際科学技術共同研究推進事業 地球規模課題対応国際科学技術協力プログラム 

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    Authorship:Coinvestigator(s)  Grant type:Competitive

    Grant amount:\650000 ( Direct Cost: \500000 、 Indirect Cost:\150000 )

  2. レガシーデータに基づくイネの品質と生産性に関わる因果関係の解析と機械学習を用いたオンサイト生育診断技術の開発

    2016.10 - 2020.3

    科学研究費補助金  さきがけ

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    Authorship:Principal investigator 

  3. 遺伝型・表現型が支配する水稲根圏の微生物食物連鎖構造と機能

    Grant number:20H02887  2020.4 - 2023.3

    日本学術振興会  科学研究費助成事業 基盤研究(B)  基盤研究(B)

    村瀬 潤, 中園 幹生, 土井 一行, 西内 俊策

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    Authorship:Coinvestigator(s) 

    根圏は植物と土壌微生物の相互作用のホットスポットである。植物根が土壌微生物に特徴的な生育環境を提供する一方、植物の良好で健全な生長は根圏微生物群集の構成やはたらきと深い関係にある。原生生物による捕食作用は、細菌・糸状菌の群集構造や活性に影響を与える重要なファクターであると認識されているが、根圏での原生生物のはたらきが他の微生物および植物の生育に与える影響はほとんど明らかにされていない。本研究では、水稲根圏における微生物食物連鎖の構造とその機能を解析し、イネの品種と根圏微生物との連関を明らかにする。

  4. 有機性廃棄物連用土壌の微生物叢と作物生産性

    2014.7 - 2017.3

    科学研究費補助金  基盤研究(B)

    柘植 尚志

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    Authorship:Coinvestigator(s) 

  5. イネ細胞壁の芳香族化合物蓄積を制御するWRKY型転写因子の機能解析とその利用

    2014.4 - 2017.3

    科学研究費補助金  若手研究(B)

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    Authorship:Principal investigator 

    本研究の目的は、イネ転写因子OsWRKY23がイネの細胞壁に含まれる芳香族成分の蓄積にどのように関わるのかを明らかにし、植物の形質に与える影響を明らかにする事であった。
    OsWRKY23-SRDX系統では長鎖脂肪酸の生合成に関与する遺伝子やリグニン、スベリンモノマーの重合に働く遺伝子の発現の変動が見られたが、PAM配列に隣接する領域に変異を導入したOsWRKY23欠損変異体では、期待したASFT11の発現減少は見られず、芳香族成分の蓄積への直接の関与は確認されなかった。本解析から、OsWRKY23が芳香族成分の蓄積に間接的に関与することが示された。

  6. イネの耐湿性及び耐乾性に寄与する根の外皮特異的なスベリン蓄積制御機構の解明

    2013.4 - 2014.7

    科学研究費補助金 

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    Authorship:Principal investigator 

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Teaching Experience (On-campus) 7

  1. 資源生物科学実験実習

    2021

  2. 情報リテラシー

    2021

  3. 植物ゲノム利用学

    2021

  4. 植物分子育種学特論

    2020

  5. 植物ゲノム利用学

    2020

  6. 情報リテラシー

    2020

  7. 資源生物科学実験実習

    2020

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Teaching Experience (Off-campus) 7

  1. 情報リテラシー

    2021 Nagoya University)

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    Level:Undergraduate (liberal arts) 

  2. 資源生物科学実験実習

    2021 Nagoya University)

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    Level:Undergraduate (specialized) 

  3. 植物ゲノム利用学

    2021 Nagoya University)

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    Level:Undergraduate (specialized) 

  4. 情報リテラシー

    2020 Nagoya University)

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    Level:Undergraduate (liberal arts) 

  5. 植物分子育種学特論

    2020 Nagoya University)

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    Level:Postgraduate 

  6. 植物ゲノム利用学

    2020 Nagoya University)

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    Level:Undergraduate (specialized) 

  7. 資源生物科学実験実習

    2020 Nagoya University)

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    Level:Undergraduate (specialized) 

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Media Coverage 2

  1. 米のトータル生産コスト低減を目指して Promotional material

    JAあいち経済連  かけはし  Timely News  2019.5

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    Author:Other 

  2. 米のトータル生産コスト低減を目指して Promotional material

    JAあいち経済連  かけはし  Timely News  2019.5

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    Author:Other 

Academic Activities 8

  1. 令和3年度スマート農業指導者養成研修

    Role(s):Panel moderator, session chair, etc.

    愛知県農業総合試験場普及戦略部技術推進室  2021.11

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    Type:Academic society, research group, etc. 

  2. 令和3年度スマート農業指導者養成研修

    Role(s):Panel moderator, session chair, etc.

    愛知県農業総合試験場普及戦略部技術推進室  2021.11

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    Type:Academic society, research group, etc. 

  3. 令和3年度作物に関する実用化技術研究会

    Role(s):Panel moderator, session chair, etc.

    愛知県農業総合試験場普及戦略部技術推進室  2021.8

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    Type:Competition, symposium, etc. 

  4. 令和3年度作物に関する実用化技術研究会

    Role(s):Panel moderator, session chair, etc.

    愛知県農業総合試験場普及戦略部技術推進室  2021.8

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    Type:Competition, symposium, etc. 

  5. 露地におけるドローンの農業利用について

    Role(s):Panel moderator, session chair, etc.

    愛知県農業総合試験場広域指導室  2020.12

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    Type:Academic society, research group, etc. 

  6. 露地におけるドローンの農業利用について

    Role(s):Panel moderator, session chair, etc.

    愛知県農業総合試験場広域指導室  2020.12

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    Type:Academic society, research group, etc. 

  7. ドローンの農業利用

    Role(s):Panel moderator, session chair, etc.

    東海農政局 生産部 生産技術環境課  2019.2

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    Type:Academic society, research group, etc. 

  8. ドローンの農業利用

    Role(s):Panel moderator, session chair, etc.

    東海農政局 生産部 生産技術環境課  2019.2

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    Type:Academic society, research group, etc. 

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