School of Informatics and Sciences

Updated on 2023/11/28
Doctor (Engineering) ( 2004.3 Nagoya University )
Master (Chemistry) ( 2000.6 Moscow State University, Chemistry Department )
Recycling technologies
Environmental cleaning
Materials from waste biomass and plastics
Nanotechnology
Nanotechnology/Materials / Polymer chemistry
Nanotechnology/Materials / Nanometer-scale chemistry
Environmental Science/Agriculture Science / Environmental load reduction and remediation
Natural Science / Biophysics, chemical physics and soft matter physics
Natural Science / Biophysics, chemical physics and soft matter physics
Materials from waste biomass and plastic
Soil improvement
Nanyang Technological University School of Biological Science Visiting Associate Professor
2016.9 - 2017.3
Country:Singapore
Nagoya University Graduate School of Environmental Studies Associate professor
2010.12
Country:Japan
Nagoya University Graduate School of Environmental Studies Lecturer
2007.1 - 2010.11
Country:Japan
Kyoto University School of Science Research Fellow
2004.4 - 2006.12
Country:Japan
Nagoya University Graduate School of Environmental Studies Department of Environmental Engineering and Architecture
2001.4 - 2004.3
Country: Japan
Moscow State University Graduate School, Division of Chemistry Polymers
1995.9 - 2000.6
Japan Society of Civil Engineers
2023.4
The Japan Society of Polymer Science
2011.4
Chemical Society of Japan
2007.4
American Chemical Society
2004.4
Chemical Society of Japan Annual Meeting Best Presentation Award
2009.4 Chemical Society of Japan
Chan Kayee, Kawai Masami, Yamake Mina, Zinchenko Anatoly
Gels ( 874 ) 2023.11
Kayee Chan, Anatoly Zinchenko
Journal of Cleaner Production 2023.11
Electrochemical extraction of methanol from lignin under mild conditions Reviewed International coauthorship
Hibino Takashi, Kobayashi Kazuo, Zhou Dongwen, Chen Siyuan, Zinchenko Anatoly, Teranishi Shinya, Miyawaki Aki, Sawada Yoshiharu
Applied Catalysis B: Environmental Vol. 341 2023.10
Kayee Chan, Anatoly Zinchenko
Waste Management Vol. 164 page: 20 - 28 2023.6
Reconstituted TAD-size chromatin fibers feature heterogeneous nucleosome clusters Reviewed International coauthorship
Korolev Nikolay, Zinchenko Anatoly, Soman Aghil, Chen Qinming, Wong Sook Yi, Berezhnoy Nikolay V, Basak Rajib, van der Maarel Johan R. C., van Noort John, Nordenskiold Lars
Scientific Reports Vol. 12 ( 1 ) page: 15558 2022.9
Journal of Environmental Chemical Engineering Vol. 10 ( 3 ) page: 107749 2022.6
Chan Kayee, Zinchenko Anatoly
Journal of Environmental Chemical Engineering Vol. 10 ( 3 ) 2022.6
Anatoly Zinchenko, Takayuki Sakai, Kohki Morikawa, Masaki Nakano
Journal of Environmental Chemical Engineering Vol. 10 ( 1 ) 2022.2
DNA-Chitosan Aerogels and Regenerated Hydrogels with Extraordinary Mechanical Properties Reviewed International coauthorship
Postnova Irina, Sarin Sergey, Zinchenko Anatoly, Shchipunov Yury
ACS Applied Polymer Materials Vol. 4 ( 1 ) page: 663 - 671 2021.12
Conversion of waste bottles' PET to a hydrogel adsorbent via PET aminolysis Reviewed
Kayee Chan, Anatoly Zinchenko
Journal of Environmental Chemical Engineering Vol. 9 ( 5 ) page: 106129 2021.10
Fluorescent Nanoparticles Synthesized from DNA, RNA, and Nucleotides Reviewed International coauthorship
Wang Maofei, Tsukamoto Masaki, Sergeyev Vladimir G., Zinchenko Anatoly
Nanomaterials Vol. 11 ( 9 ) page: 2265 2021.9
Metal Ions Sensing by Biodots Prepared from DNA, RNA, and Nucleotides. Reviewed International coauthorship International journal
Maofei Wang, Masaki Tsukamoto, Vladimir G Sergeyev, Anatoly Zinchenko
Biosensors Vol. 11 ( 9 ) page: 333 2021.9
Adsorptive Removal of Heavy Metal Ions, Organic Dyes, and Pharmaceuticals by DNA-Chitosan Hydrogel Invited Reviewed
Chan K., Morikawa K., Shibata N., Zinchenko A.
Gels Vol. 7 ( 3 ) page: 112 2021.8
DNA-Chitosan Hydrogels: Formation, Properties, and Functionalization with Catalytic Nanoparticles Reviewed International coauthorship
Morikawa K., Masubuchi Y., Shchipunov Y., Zinchenko A.
ACS Applied Bio Materials Vol. 4 page: 1823 - 1832 2021.1
Internal Motion of Chromatin Fibers Is Governed by Dynamics of Uncompressed Linker Strands. Reviewed International coauthorship
Biophysical Journal Vol. 119 ( 11 ) page: 2326 - 2334 2020.12
Compaction and self-association of megabase-sized chromatin are induced by anionic protein crowding Reviewed International coauthorship
Zinchenko Anatoly, Chen Qinming, Berezhnoy Nikolay V, Wang Sai, Nordenskiold Lars
Sort Matter Vol. 16 ( 18 ) page: 4366 - 4372 2020.5
Amino Acid Sequence of Oligopeptide Causes Marked Difference in DNA Compaction and Transcription Reviewed
Zinchenko Anatoly, Hiramatsu Hiroyuki, Yamaguchi Hideaki, Kubo Koji, Murata Shizuaki, Kanbe Toshio, Hazemoto Norio, Yoshikawa Kenichi, Akitaya Tatsuo
Biophysical Journal Vol. 116 ( 10 ) page: 1836 - 1844 2019.5
Small DNA Additives to Polyelectrolyte Multilayers Promote Formation of Ultrafine Gold Nanoparticles with Enhanced Catalytic Activity Invited Reviewed
Nagahama C., Zinchenko A.
Colloid and Polymer Science Vol. 297 page: 363–369 2019.3
Wang K, Ma H, Pu S, Yan C, Wang M, Yu J, Wang X, Chu W, Zinchenko A
Journal of Hazardous Materials Vol. 362 page: 160 - 169 2019.1
Zinchenko Anatoly, Inagaki Eisuke, Murata Shizuaki
ACS OMEGA Vol. 4 ( 1 ) page: 458 - 464 2019.1
Ma Hui, Pu Shengyan, Hou Yaqi, Zhu Rongxin, Zinchenko Anatoly, Chu Wei
Chemical Engineering Journal Vol. 345 page: 556 - 565 2018.8
Soenaryo T., Murata S., Zinchenko A.
Chemosphere Vol. 210 page: 567-576 2018.8
Compaction of Single Molecule Megabase-Long Chromatin under the Influence of Macromolecular Crowding Reviewed
Zinchenko A., Berezhnoy N., Chen Q., Nordenskiöld L.
Biophysical Journal Vol. 114 page: 2326–2335 2018.5
Stretch and Dynamics of Single Chromatin Molecules Confined in Nano-fluidic Channels
William M. Rosencrans, Fan Liu, Nikolay V. Berezhnoy, Anatoly Zinchenko, Lars Nordenskiold, Johan R. C. van der Maarel
BIOPHYSICAL JOURNAL Vol. 114 ( 3 ) page: 599A - 599A 2018.2
Removal of Carbon Nanomaterials by Co-Precipitation with Chitosan: A Facile Method for Water Pre-Treatment Reviewed
Soenaryo T., Zinchenko A., Murata S.
Environmental Science: Water Research Technolology Vol. 4 page: 265-271 2018.1
Single-Molecule Compaction of Megabase-Long Chromatin Molecules by Multivalent Cations Reviewed
Zinchenko A., Berezhnoy N., Wang S, Rosencrans W., Korolev N., van der Maarel J., Nordenskiöld L.
Nucleic Acids Research Vol. 2 page: 635-649 2018.1
Formation of Multi-Layered Chitosan Honeycomb Spheres via Breath-Figure-Like Approach in Combination with Co-Precipitation Processing Reviewed
Ma H., Pu S.Y., Ma J., Yan C., Zinchenko A., Pei X., Chu W.
Materials Letters Vol. 211 page: 91-95 2018.1
DNA-based materials as chemical reactors for synthesis of metal nanoparticles
Zinchenko A., Sergeyev V. G.
Polymer Science Series C Vol. 59 ( 1 ) page: 18-28 2017.9
Novel highly porous magnetic hydrogel beads composed of chitosan and sodium citrate: an effective adsorbent for the removal of heavy metals from aqueous solutions Reviewed
Pu S.Y., Ma H., Zinchenko A., Chu W.
Environmental Science and Pollution Research Vol. 24 ( 19 ) page: 16520-16530 2017.7
Photoinduced Fusion of Lipid Bilayer Membranes Reviewed
Suzuki Y., Nagai K., Zinchenko A., Hamada T.
Languir Vol. 33 ( 10 ) page: 2671-2676 2017.3
An efficient heterogeneous fenton catalyst based on modified diatomite for degradation of cationic dye simulated wastewater Reviewed
Pu S.Y., Xiang C., Zhu R., Ma H., Zinchenko A., Chu W.
Desalination Water Treat. Vol. 79 page: 378-385 2017
大学の廃棄物のキャンパスマインとしての活用への提言(1) ─ 名古屋大学における廃試薬の調査に基づく考察 Reviewed
ジンチェンコ アナトーリ, 竹田 裕哉, 三品 太志, 村田 静昭, 陳 寧
環境と安全 Vol. 7 page: 17 2016.4
Gold Nanoparticles in DNA-Based Multilayer Films: Synthesis, Size Control, and Influence of the Multilayer Structure on Au NP Catalytic Properties Reviewed
Zinchenko A, Nagahama C, Murata. S
ChemNanoMat Vol. 2016 ( 2 ) page: 125-132 - 132 2016.1
DNA Conformational Behavior and Compaction in Biomimetic Systems: Toward Better Understanding of DNA Packaging in Cel Reviewed
Zinchenko A.
Adv. Colloid. Interface Sci. Vol. 2016 ( 232 ) page: 70-79 2016.1
Decoration of DNA scaffold by gold nanoparticles formed in aqueous solutions Reviewed
Lopatina L.I., Karpushkin E.A., Zinchenko A., Sergeyev V.G.
Mendeleyev Comm. Vol. 26 page: 291‐292 2016
Fabrication of Bimetallic Core-Shell and Alloy Ag-Au Nanoparticles on a DNA Template Reviewed
Taniguchi S., Zinchenko A., Murata. S.
Chem.Lett. Vol. 45 page: 610‐611 2016
Divalent cation shrinks DNA but inhibits its compaction with trivalent cation Reviewed
Tongu C., Kenmotsu T., Yoshikawa Y., Zinchenko A., Chen N., Yoshikawa K.*
J. Chem. Phys. Vol. 144 page: 205101 2016
Metallization of DNA Hydrogel - Application of Soft Matter Host for Preparation and Nesting of Catalytic Nanoparticles Reviewed
Zinchenko A., Che Y., Taniguchi S., Lopatina L.I., Sergeyev V.G.,Murata S.
J.Nanopart. Res. Vol. 18 page: 179 2016
Suggestion on application of campus wastes as valuable resources, a campus mine (1) — Study and discussion on chemical wastes of Nagoya University Reviewed
Zinchenko Anatoly, Takeda Yuuya, Mishina Taiji, Murata Shizuaki, Chen Ning
Journal of Environment and Safety Vol. 7 ( 1 ) page: 17 - 23 2016
Size Dependent Catalytic Activity of Gold Nanoparticles in DNA Hydrogels Reviewed
Zinchenko A. Taniguchi S., Murata. S.
Macromolecular Symposia Vol. 2015 ( 129 ) page: 106-111 2015.12
DNAの資源化
ジンチェンコ アナトーリ
化学と工業 Vol. 68 ( 9 ) page: 804-805 2015.9
Solubilization of MWCNT by DNA and Construction of DNA-MWCNT Hybrid Hydrogels Reviewed
Zinchenko A, Taki Y, Sergeyev V.G, Murata S
Nanomaterials Vol. 2015 ( 5 ) page: 270-283 2015.2
Uptake of Aromatic Compounds by DNA: Toward the Environmental Application of DNA for Cleaning Water Reviewed
Fernández-Solis C, Kuroda Y, Zinchenko A, Murata S
Colloids Surf., B. Vol. 2015 ( 129 ) page: 146–153 2015.2
Compaction of Double-Stranded DNA by Negatively Charged Proteins and Colloids Reviewed
Zinchenko A, Yoshikawa K
Curr. Opin. Colloid Interface Sci. Vol. 2015 ( 20 ) page: 60-65 2015.1
Control of a Catalytic Activity of Gold Nanoparticles Embedded in DNA Hydrogel by Swelling/Shrinking the Hydrogel's Matrix Reviewed
Che Y, Zinchenko A, Murata S
J. Colloid Interface Sci. Vol. 2015 ( 445 ) page: 364-370 2015.1
Entrapment and Removal of Carbon Nanotubes and Fullerenes by Co-Precipitation with Calcium Carbonate Beads Reviewed
Pu S.Y, Zinchenko A.A, Chen N, Murata S
ACS Sustainable Chem. Eng. Vol. 2014 ( 2 ) page: 2275-2282 2014.9
Crowding by anionic nanoparticles causes DNA double-strand instability and compaction Reviewed
Zinchenko, A.; Tsumoto, K.; Murata, S.; Yoshikawa, K.
J. Phys. Chem. Vol. 118 ( 5 ) page: 1256-1262 2014
Photochemical metallization to fabricate DNA-templated gold nanorings Reviewed
Pu S.Y, Zinchenko A.A., Qina L., Xua M., M. Xu., Murata S.
Mater. Lett. Vol. 130 page: 168-171 2014
DNA Hydrogel as a Template for Synthesis of Ultrasmall Gold Nanoparticles for Catalytic Applications Reviewed
Zinchenko A. A., Miwa, Y., Lopatina L.I., Sergeyev V.G., Murata S.
ACS Appl. Mater. Interfaces Vol. 6 ( 5 ) page: 3226–3232. 2014
Size Control of Gold Nanoparticles Synthesized in a DNA Hydrogel Reviewed
Miwa, Y, Zinchenko A. A, Lopatina L.I, Sergeyev V.G, Murata S
Polym. Int. Vol. 63 ( 9 ) page: 1566-1571 2014
Extraction of Noble and Rare-Earth Metals from Aqueous Solutions by DNA Cross-Linked Hydrogel Reviewed
Maeda Y., Zinchenko A. A., Murata S.
ChemPlusChem Vol. 78 ( 7 ) page: 619-622 2013
Entrapping of Fullerenes, Nanotubes, and Inorganic Nanoparticles by a DNA-Chitosan Complex: A Method for Nanomaterials Removal Reviewed
Zinchenko A. A, Maeda N, Pu S.Y, Murata S
Environ. Sci. Technol. Vol. 47 ( 9 ) page: 4489-4496 2013
Templating of inorganic nanomaterials by biomacromolecules and their assemblies Invited Reviewed
Vol. 54 ( 7 ) page: 1048-1055 2012
Facile Control of DNA-Templated Inorganic Nanoshell Size Reviewed
Vol. 12 page: 635-641 2012
Photochemical Modulation of DNA Conformation by Organic Dications Reviewed
Zinchenko A. A, Tanahashi M, Murata S
ChemBioChem Vol. 13 page: 105-111 2012
Thiol-Mediated Anchoring of Silver Cations to DNA for Construction of Nanofibers on DNA Scaffold Reviewed
Zinchenko A. A, Chen N, Baigl D, Lopatina L, Sergeyev V. G
Biomacromolecules Vol. 13 ( 6 ) page: 1787-1793 2012
A Facile Method for the Assessment of DNA Damage Induced by UV-Activated Nanomaterials Reviewed
Yamazaki Y, Zinchenko A. A, Murata S
Nanoscale Vol. 3 ( 7 ) page: 2909-2915 2011
Effects of Cationic and Anionic Nanoparticles on the Stability of the Secondary Structure of DNA Reviewed
Kamata H., Zinchenko A. A., Murata S.
Colloid Polym. Sci. Vol. 289 page: 1329-1335 2011
Conformational behavior of DNA-templated CdS inorganic nanowiren of Hollow Meshed Inorganic Nanoshells Reviewed
Pu S. Y., Zinchenko A. A., Murata S.
Nanotechnology Vol. 22 page: 375604 2011
Facile Control of DNA-Templated Inorganic Nanoshell Size Reviewed
Pu S. Y., Zinchenko A. A., Murata S.
J. Nanosci. Nanotechnol. page: in press 2011
DNA-Assisted "Double-Templating" Approach for the Construction of Hollow Meshed Inorganic Nanoshells Reviewed
Pu S. Y., Zinchenko A. A., Murata S.
Langmuir Vol. 27 ( 8 ) page: 5009-5013 2011
DNA Compaction on Histone Mimics Prepared from Silica Nanoparticles
TAKENAKA Toshio, ZINCHENKO Anatoly A., YOSHIKAWA Kenichi, MURATA Shizuaki
Vol. 39 ( 1 ) page: 72 - 73 2010.1
DNA Compaction on Histone Mimics Prepared from Silica Nanoparticles Reviewed
Takenaka T., Zinchenko A. A., Yoshikawa K., Murata S.
Chemistry Letters Vol. 39 page: 72-73 2010
Quantum dot probes for observation of single molecule DNA and a synthetic polyelectrolyte higher-order structure Reviewed
Chen N., Zinchenko A. A., Yamazaki Y., Yoshikawa Y., Murata S., Yoshikawa K.
Soft Matter Vol. 6 page: 2834 - 2841 2010
Roles of Mono- and Divalent Cations in DNA Compaction Induced by Histone-Mimic Nanoparticles Reviewed
Takenaka T., Zinchenko A. A., Yoshikawa K., Murata S.
Bulletin of the Chemical Society of Japan Vol. 83 page: 643-650 2010
Thermo-Switching of the Conformation of Genomic DNA in Solutions of Poly(N-isopropylacrylamide) Reviewed
Chen N, Zinchenko A. A, Kidoaki S, Murata S, Yoshikawa K
Langmuir Vol. 26 ( 5 ) page: 2995-2998 2010
*Application of DNA condensation for removal of mercury ions from aqueous solutions Reviewed
Zinchenko A. A, Sakai H, Matsuoka S, Murata S
Journal of Hazardous Materials Vol. 168 ( 1 ) page: 38-43 2009
Removal of heavy metal ions from aqueous solutions by complexation with DNA and precipitation with cationic surfactant Reviewed
Sakai H., Matsuoka S., Zinchenko A. A., Murata S.
Colloids Surf., A. Vol. 347 page: 210–214 2009
Assessment of the DNA damage using the fluorescence microscope Reviewed
Yamazaki Y., Zinchenko A. A., Murata S.
Nucleic Acids Symp. Ser. Vol. 53 page: 47-48 2009
ATP-induced shrinkage of DNA with MukB protein and MukBEF complex of Escherichia coli Reviewed
Chen N, Zinchenko A.A, Yoshikawa Y, Araki S, Adachi S, Yamazoe M, Hiraga S, Yoshikawa K
Journal of Bacteriology Vol. 190 ( 10 ) page: 3731-3737 2008
Photochemical Metallization of DNA Reviewed
Zinchenko A. A, Chen N, Murata S
Chemistry Letters Vol. 37 page: 1096-1097 2008
Conformational Behavior of Giant DNA through Binding with Ag+ and Metallization Reviewed
Zinchenko A. A., Baigl D, Chen N., Pyshkina O. A., Endo K., Sergeyev V. G., Yoshikawa K.
Biomacromolecules Vol. 9 page: 1981-1987 2008
Single-Molecule Observations of Giant DNA and Synthetic Polyelectrolyte by Labeling with Semiconductor "Quantum Dots" Reviewed
Chen N., Yamazaki Y., Zinchenko A., Yoshikawa Y., Murata S., Yoshikawa K.
Proceedings of International Symposium on Micro-Nano Mechatronics and Human Science page: 140-144 2008
A Novel Type Cationic Silica Nanoparticles and its Potential Application in Biomedicine Reviewed
Li L., Takenaka T., Zinchenko A., Chen N., Ma Y., Yoshikawa K.
Proceedings of International Conference on Bioinformatics and Biomedical Engineering (ICBBE) 2008 page: 1539-1542 2008
Transcription of Giant DNA Complexed with Cationic Nanoparticles as a Simple Model of Chromatin Reviewed
Zinchenko A. A., Luckel F., Yoshikawa K.
Biophysical Journal Vol. 92 page: 1318-1325 2007
Dynamic Conformational Behavior and Molecular Interaction Discrimination of DNA/Binder Complexes by Single-Chain Stretching in a MicroDevice Reviewed
Huang W.-H., Zinchenko A. A., Pawlak C., Chen Y., Baigl D.
ChemBioChem Vol. 8 ( 15 ) page: 1771-1774 2007
Visualization of Different Pathways of DNA Release from Interpolyelectrolyte Complex Reviewed
Ayoubi M. A., Zinchenko A. A., Philippova O. E, Khokhlov A. R., Yoshikawa K.
Journal of Physical Chemistry B Vol. 111 page: 8378-8378 2007
Single-Chain Compaction of Long Duplex DNA by Cationic Nanoparticles: Modes of Interaction and Comparison with Chromatin Reviewed
Zinchenko A. A, Sakaue T, Araki S, Yoshikawa K, Baigl D
Journal of Physical Chemistry B Vol. 111 page: 3019 -3031 2007
Compaction of DNA on nanoscale three-dimensional templates Invited
Zinchenko A. A., Chen N.
Journal of Physics: Condensed Matter Vol. 18 page: R453-R480 2006
Na+ more strongly inhibits DNA compaction by spermidine (3+) than K+ Reviewed
Hibino K, Yoshikawa Y, Murata S, Saito T, Zinchenko A. A, Yoshikawa K
Chemical Physics Letters Vol. 426 page: 405-409 2006
Probing Biopolymer Conformation by Metallization with Noble Metals Reviewed
Chen N, Zinchenko A. A, Yoshikawa K
Nanotechnology Vol. 17 page: 5224-5232 2006
*Compaction of single-chain DNA by histone-inspired nanoparticles Reviewed
Zinchenko A. A., Yoshikawa K., Baigl D
Physical Review Letters Vol. 95 ( 22 ) page: 228101 2005
Na+ Shows a Markedly Higher Potential than K+ in DNA Compaction in a Crowded Environment Reviewed
Zinchenko A. A., Yoshikawa K.
Biophys. J. Vol. 88(6) page: 4118-4123 2005
DNA-templated silver nanorings Reviewed
Zinchenko A. A., Yoshikawa K., Baigl D.
Adv. Mater. Vol. 17 ( 23 ) page: 2820-2823 2005
How Does DNA Compaction Favor Chiral Selectivity with Cationic Species? Higher Selectivity with Lower Cationic Charge Reviewed
Zinchenko A. A., Chen N., Murata S., Yoshikawa K.
ChemBioChem Vol. 6(8) page: 1419-1422 2005
Specific Formation of Beads-on-a-Chain Structures on Giant DNA Using a Designed Polyamine Derivative Reviewed
Chen N., Zinchenko A. A., Murata S., Yoshikawa K.
J. Am. Chem. Soc. Vol. 127 page: 10910-10916 2005
DNA Compaction by the Divalent Cations: Structural Specificity Revealed by the Potentiality of the Designed Quaternary Diammonium Salts, Reviewed
Zinchenko A. A., Sergeyev V. G., Yamabe K., Murata S., Yoshikawa K.
ChemBioChem Vol. 5 ( 3 ) page: 360-368 2004
Stereoisomeric Discrimination in DNA Compaction Reviewed
Zinchenko A. A, Sergeyev V. G, Kabanov V. A, Murata S, Yoshikawa K
Angewandte Chemie International Edition Vol. 43 ( 18 ) page: 2378-2371 2004
Controlling the Intrachain Segregation on a Single DNA Molecule Reviewed
Zinchenko A. A., Sergeyev V. G., Murata S., Yoshikawa K.
J. Am. Chem. Soc. Vol. 125 ( 15 ) page: 4414 - 4415 2003
Mechanism of Interaction of DNA with Surfactants in Water-Alcohol Media and Structure of the Related Complexes Reviewed
Sergeyev V. G., Pyshkina O. A., Zinchenko A. A., Zezin S. B., Zezin A. B., Kabanov V. A.
Polymer Science, Seriya A Vol. 45 ( 5 ) page: 814 - 822 2003
Ascorbic acid induces a marked conformational change in long duplex DNA Reviewed
Yoshikawa Y., Suzuki M., Chen N., Zinchenko A. A., Murata S., Kanbe T., Nakai T., Oana H., Yoshikawa K.
European Journal of Biochemistry Vol. 270 ( 14 ) page: 3101-3106 2003
Secondary Structure of DNA is Recognized by Slightly Cross-Linked Cationic Hydrogel Reviewed
Sergeyev V. G, Novoskoltseva O. A, Zinchenko O. A, Pyshkina O. A, Rogacheva V. B, Zezin A. B, Yoshikawa K, Kabanov V. A
J. Am. Chem. Soc. Vol. 124 page: 11324-11333 2002
The secondary structure determines the character of DNA interaction with a slightly cross-linked cationic hydrogel Reviewed
Sergeyev V. G, Novoskoltseva O. A, Zinchenko A. A, Pyshkina O. A, Rogacheva V. B, Zezin A. B, Kabanov V. A
Doklady Physical Chemistry Vol. 116 page: 218-222 2001
Interplay between Folding/Unfolding and Helix/Coil Transitions in Giant DNA Reviewed
Mikhailenko S. V., Sergeyev V. G., Zinchenko A. A., Gallyamov M. O., Yaminsky I. V., Yoshikawa K.
Biomacromolecules Vol. 1 ( 4 ) page: 597-603 2000
DNA-surfactant complexes in a water/alcohol mixture Reviewed
Zinchenko A. A, Sergeyev V. G, Pyshkina O. A
Progress in Polymer and Colloid Science Vol. 116 page: 21-25 2000
Interpolyelectrolyte Complexes Formed by DNA and Astramol TM Poly(propyleneimine) Dendrimers Reviewed
Kabanov V. A, Sergeyev V. G, Pyshkina, O. A. Zinchenko A. A, Zezin A. B, Joosten J. G. H, Brackman J, Yoshikawa K
Macromolecules Vol. 33 ( 26 ) page: 9587-9593 2000
相分離生物学の全貌
湊元 幹太, ジンチェンコ アナトーリ( Role: Joint author , 42. 細胞様構造と相分離:モデル実験によるアプローチ)
東京化学同人 2020.11 ( ISBN:9784807913466 )
リアルタイム計測による生命現象の解析 (R&D SERIES)・バイオ世界における自己組織化を利用したナノ構造・鋳型技術の進展
ジンチェンコ アナトーリ, 鎌田宏幸( Role: Joint author)
シーエムシー出版 2011.3
"Single DNA molecules: Compaction and decompaction" in DNA Interactions with Polymers and Surfactants, ed. Dias R.
Zinchenko A. A., Pyshkina O. A., Lezov A. V., Sergeyev V. G., Yoshikawa K.( Role: Joint author)
Willey-VCH 2008
"Nanostructures and organizations of compacted single chains of polyelectrolytes" in Polymeric nanostructures and their applications
Zinchenko A. A., Baigl D., Yoshikawa K.( Role: Joint author)
American Scientific Publishers 2007
廃棄ポリオレフィンを用いた2段階水熱合成による多色カーボンドットの作製
高橋 侑誠、陳 嘉儀、ジンチェンコ アナトーリ
日本化学会秋季事業 第13回 CSJ化学フェスタ2023 2023.10.17 日本化学会
Application of Self-Organized Interpolyelectrolyte Networks as Functional Materials: Reinforcement, Adsorption, and Templating International coauthorship International conference
Zinchenko A., Wang Y., Chan K., Sakai T., Nakano M.
13th International Symposium on Polyelectrolytes 2023.8.29 Czech Technical University
Design of functional materials from waste PET bottles via chemical recycling International conference
K. Chan, A. Zinchenko
7th Green and Sustainable Chemistry Conference 2023.5.24 Elsevier
Design of adsorbent materials based on oligomeric products of waste PET bottles decomposition by aminolysis International conference
K. Chan, A. Zinchenko
2022 Fall American Chemical Society Meeting 2022.8.24 American Chemical Society
Assembly, fluorescent properties, and metal ion sensing characteristics of biodots synthesized from DNA, RNA, and nucleotides International conference
A. Zinchenko, M. Wang
Pacifichem 2021 2021.12.18 Pacific Basin Societies
Conversion of PET Bottles to Hydrogel Adsorbents via PET Aminolysis International conference
K. Chan, A. Zinchenko
6th Green and Sustainable Chemistry Conference 2021.11.18 Elsevier
DNA-Chitosan Hydrogels: formation, properties, and environmental applications International coauthorship International conference
Zinchenko A., Chan K., Morikawa K., Shchipunov Y.
7th Congress of Federation of Asian Polymer Societies 2021.6.15 Federation of Asian Polymer Societies
バイオマス由来の高分子材料の混合が地盤材料の変形・強度特性に及ぼす影響
酒井崇之, 中野正樹, ジンチェンコアナトーリ
令和2年度土木学会中部支部研究発表会 2021.3
DNA-Chitosan Hydrogels for Environmental and Materials Science Applications International conference
K. Morikawa, A. Zinchenko
5th Green and Sustainable Chemistry Conference 2020.11.11 Elsevier
Preparation of complex gel from DNA and chitosan and its application as metal ion adsorption material
Morikawa K., Zinchenko A.
The 100th CSJ Annual Meeting
Compaction of DNA and Chromatin under Influence of Neutral and Anionic Crowding Invited International coauthorship International conference
Zinchenko A.
Okinawa Colloids 2019
Encapsulation of Long DNA into Polyelectrolyte Capsules International conference
Zinchenko A., Inagaki E., Murata S.
The 45th International Symposium on Nucleic Acids Chemistry
Unimolecular compaction of megabase-long chromatin International conference
Zinchenko A.
Workshop on Polyelectrolytes in Chemistry, Biology and Technology 2018
Application of DNA-Based Hydrogels and Multilayered Films for Templating of Inorganic Nanomaterials Invited International conference
Zinchenko A.
International Symposium on Polyelectrolytes
Novel Applications of DNA in Fields of Environment and Nanomaterials
Zinchenko A. A.
International Symposium on EcoTopia Science 2011
DNAを用いた二重鋳型法による中空ナノシェル構造創製 International conference
ジンチェンコ アナトーリ,蒲生彦,村田静昭
ナノ学会第9回大会
DNA スポンジを用いた水溶液中からの重金属イオン除去
松岡紗緒里・酒井博臣・Zinchenko Anatoly・村田静昭
第40中部化学関係学協会支部連合秋季大会
Study on Interaction of DNA with Chiral Nanoparticles to Verify a Role of Molecular Chirality of Nanoscale Template in DNA Compaction International conference
International Conference on Nanoscience and Technology "China Nano" 2009
単一分子DNA金属化によりDNAー金属ナノ構造体の形成
Zinchenko, Anatoly・陳 寧・Baigl, Damien・吉川 研一
第89日本化学会第89春季年会
Detection of Polymer Conformational Transition by Metallization with Noble Metals
Purification of Heavy Metal Ions from Aqueous Solutions by Incorporation into DNA-Surfactant Complexes International conference
5th International Conference "Interfaces Against Pollution" (IAP 2008)
A novel type cationic silica nanoparticles and its potential application in biomedicine
Liu L.
2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008
DNA-nanoparticles complexes as a simplest chromatin model
Biomimetic DNA compaction by cationic nanoparticles International conference
American Chemical Society 231st National Meeting and Exposition
Compaction of Single-Chain DNA by Histone-Inspired Nanoparticles International conference
European Polymer Congress
Compaction of DNA and Chromatin under Influence of Neutral and Anionic Crowding Invited
Zinchenko A
Okinawa Colloids 2019 2019.11.3
A novel type cationic silica nanoparticles and its potential application in biomedicine International conference
Liu L
2nd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2008 2008.1.1
Application of DNA-Based Hydrogels and Multilayered Films for Templating of Inorganic Nanomaterials Invited
Zinchenko A
International Symposium on Polyelectrolytes 2016.6.30
DNA-Chitosan Hydrogels for Environmental and Materials Science Applications
K. Morikawa, A. Zinchenko
5th Green and Sustainable Chemistry Conference 2020.11.10
DNAを用いた二重鋳型法による中空ナノシェル構造創製
ジンチェンコ アナトーリ, 蒲生彦, 村田静昭
ナノ学会第9回大会 2011.6.2
Encapsulation of Long DNA into Polyelectrolyte Capsules
Zinchenko A, Inagaki E, Murata S
The 45th International Symposium on Nucleic Acids Chemistry 2018.11.7
Novel Applications of DNA in Fields of Environment and Nanomaterials International conference
Zinchenko A. A
International Symposium on EcoTopia Science 2011 2011.12.9
Preparation of complex gel from DNA and chitosan and its application as metal ion adsorption material International conference
Morikawa K, Zinchenko A
The 100th CSJ Annual Meeting 2020.3.22
Unimolecular compaction of megabase-long chromatin
Zinchenko A
Workshop on Polyelectrolytes in Chemistry, Biology and Technology 2018 2018.3.12
Grant number:21K12306 2021.4 - 2024.3
Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (C) Grant-in-Aid for Scientific Research (C)
Authorship:Principal investigator
Grant amount:\4160000 ( Direct Cost: \3200000 、 Indirect Cost:\960000 )
DNA conformational behavior and functions in microcapsules
Grant number:17K05611 2017.4 - 2020.3
Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (C) Grant-in-Aid for Scientific Research (C)
Zinchenko Anatoly
Authorship:Principal investigator Grant type:Competitive
In eukaryotic cells, DNA macromolecules with a length exceeding 1 meter are densely folded and exist in cells with a size of several μm. Artificial experimental models are needed to explain the higher order structure and behavior of DNA in cellular-like environment. In this study, we constructed an "artificial cell model" method for encapsulating very ling genomic DNA in polymer capsules of several μm size. Using this experimental model, we made clear the behavior of DNA confined in the cell-sized space. The experimental methodology proposed in this study is promising for gene delivery and related biomedical applications.
Construction of 2- and 3-dimensional nanostructures using DNA metallization
Grant number:24710106 2012.4 - 2015.3
Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Grant-in-Aid for Young Scientists (B) Grant-in-Aid for Young Scientists (B)
ZINCHENKO Anatoly
Authorship:Principal investigator Grant type:Competitive
Grant amount:\4550000 ( Direct Cost: \3500000 、 Indirect Cost:\1050000 )
DNA extracted from salmon milt, the waste product of marine industry, was utilized as a functional material for construction of 2- and 3-dimensional nanomaterials for catalytic applications. DNA-based thin polymeric films and DNA hydrogels were first prepared and then used for efficient adsorption of noble metals (Au, Ag, Pt, Pg, etc.). After adsorption of metal ions inside DNA-based material, reduction of metal ions inside thin film/hydrogel resulted in a formation of well dispersed metal nanoparticles of several nanometer sizes with a narrow size distributions. Thus prepared hybrid materials showed high catalytic activity that can be controlled by swelling/shrinking of hydrogel matrix. In contrast to colloidal solutions of catalytic nanoparticles which separation and recovery problems limit their applications, DNA-based catalysts developed in this project are advantageous due to high stability, facile operation during catalysis, easy separation form reaction mixtures and reuse.
ゲノムDNAのナノテンプレートによる構造と機能の制御
Grant number:20034025 2008 - 2010
ZINCHENKO A.A.
Authorship:Principal investigator Grant type:Competitive
Grant amount:\2900000 ( Direct Cost: \2900000 )
本研究では、様々なナノテンプレート(ナノメーターサイズ物質)を用いて、DNAとの相互作用および形成されるコンプレックスの形態をプログラミングすることに、DNA高次構造と機能の制御を目的としたものである。本年度、球状テンプレート(シリカナノ粒子)および棒状テンプレート(金ナノロッド)はDNA二次構造と高次構造に与える影響について研究した。(1) DNAの溶液中安定性およびDNA二次構造(二重らせん)の安定性に対するナノ粒子の影響を調べた。アニオン性ナノ粒子の影響はなかったが、カチオン性ナノ粒子はDNAの溶液中安定性を乱し、DNAの沈殿を起こし、更に、DNAを沈殿させないナノ粒子の濃度においても、DNAの二重らせんが高くなると連れて、DNA二重らせんの溶解は大きく抑制された。この結果から、自然界で起こるDNAの二重らせん溶解が必要な過程(転写、複製)では、カチオン性ナノ粒子がこのような過程を妨げると考えられる。(2) 次は、DNAとナノ粒子の間の相互作用における生物学的に重要な一価と二価カチオンの影響について研究した。その結果は、全てのカチオンがナノ粒子によってDNA凝縮を促進し、Na^+とK^+またはMg^<2+>とCa^<2+>の間は大直径のカチオンの効果が高かった。(3) 最後に、DNAとカチオン性ナノロッドの間相互作用を徹底的に調べ、ナノロッド濃度によって様々なDNA-ナノロッド複合体のナノ構造を観察行った。カチオン性ナノロッドはDNA凝縮を誘起することにより、DNA鎖上のナノロッドが自己組織化する。DNA対ナノロッドの割合によって、DNA鋳型に沿うって並んでおり、ナノロードの高濃度においてはDNAが凝縮しながら、DNAとコンプレックスしたナノロッドが高秩序構造(結晶状の構造)に組織化することを明らかにした。
時空間秩序の自己組織と生命現象化
2007.1 - 2011.3
科学研究費補助金 国際共同研究事業(ICORP),科学技術振興機構
吉川 研一
Authorship:Other
Long chain DNA folding by nanoparticles: Construction of Artificial Chromatin Model
Grant number:18719001 2006 - 2008
ZINCHENKO A.a.
Authorship:Principal investigator Grant type:Competitive
Grant amount:\3740000 ( Direct Cost: \3500000 、 Indirect Cost:\240000 )
キラル低分子による長鎖DNAの折り畳み
Grant number:04F04154 2004 - 2005
日本学術振興会 科学研究費助成事業 特別研究員奨励費 特別研究員奨励費
吉川 研一; ジンチェンコ アナトーリ
生物はキラルなアミノ酸を骨格にもつようなたんぱく質を活用することにより、キラリティを持つDNA分子と相互作用し、DNA分子の活性を制御していると考えられている。従来、DNAのキラリティの認識は、特異的な三次元構造を持つ高分子でなければ不可能であるとされてきたが、申請者らの研究により、3個程度の塩基性アミノ酸のオリゴマーを用いるだけでも、DNAの折り畳み構造についてほぼ100%のキラリティの認識を示すことを明らかにしてきた。このような成果をさらに発展させ、キラリティを認識するためには、何が必要となってくるのかについて、オリゴマーにかわる新たなキラリティをもつ物質を合成し、実験を積み重ねた。また、それの実験結果が、遺伝子発現についてどのように影響しているのかについて、化学的な立場からの考察を進めた。
また、真核細胞の中では、DNAはヒストンと結合しクロマチンと呼ばれる複合体を形成して存在している。DNAは二重らせん構造をとることが良く知られているが、ヒストンと複合体を形成する際に、DNAのねじれが重要な役割を果たしていることが示唆されている。そこで、正電荷を帯びたナノ粒子をヒストンに見立てて、DNAとナノ粒子との複合体の形成に関して実験を行った。その結果、ナノ粒子を加えることによって、DNAはより凝縮しやすくなることを明らかにした。また、ヒストンと同じオーダーのナノ粒子を用いた時にもっともDNAが凝縮しやすくなることも明らかにした。この結果はクロマチン形成のメカニズムを議論する際に重要な役割を果たすことが期待される。
粒子材料及びその製造方法
村田静昭, ジンチェンコ アナトーリ, 蒲生彦
Sustainability and Environmental Studies
2020
Fundamentals of Chemistry I
2022
Sustainable Materials Science (Formerly: Nanotechnology and Environment)
2022
Sustainability and Environmental Studies
2022
環境物質学実験 2
2018
環境物質学5
2018
化学基礎I
2018
ナノテクノロジーと環境
2018
環境物質学実験 2
2017
環境物質学5
2017
ナノテクノロジーと環境
2017
化学基礎I
2017
Laboratory in Chemistry
2011
環境ナノテクノロジー
2009
化学実験
2009
環境物質5
2009
化学グランプリ(作題・実行)
日本化学会 2014.9