Updated on 2026/03/09

写真a

 
NIIMI Tomoaki
 
Organization
Graduate School of Bioagricultural Sciences Department of Applied Biosciences Lecturer
Graduate School
Graduate School of Bioagricultural Sciences
Undergraduate School
School of Agricultural Sciences Department of Applied Biosciences
Title
Lecturer
Contact information
メールアドレス

Degree 1

  1. Ph. D. ( 1997.3   Nagoya University ) 

Research Areas 2

  1. Others / Other  / Applied Biochemistry

  2. Others / Other  / Applied Molecular Cell Biology

Current Research Project and SDGs 2

  1. 新奇骨誘導タンパク質NELL1の機能解析

  2. 基底膜蛋白質ラミニンの大量生産系の構築

Research History 6

  1. 名古屋大学大学院生命農学研究科講師

    2016.4

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    Country:Japan

  2. 名古屋大学大学院生命農学研究科助教

    2007.4 - 2015.3

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    Country:Japan

  3. 名古屋大学大学院生命農学研究科助手

    2004.4 - 2007.3

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    Country:Japan

  4. Researcher, Sekiguchi Biomatrix Signaling Project, ERATO, Japan Science and Technology Agency

    2001.3 - 2004.3

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    Country:Japan

  5. Visiting Fellow, National Cancer Institute

    1998.10 - 2001.2

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    Country:Japan

  6. Researcher, Nagoya University BioSciences Center

    1997.4 - 1998.9

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    Country:Japan

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Education 2

  1. Nagoya University   Graduate School, Division of Agriculture   Graduate program for Biochemical Regulation

    - 1997

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    Country: Japan

  2. Nagoya University   Faculty of Agriculture   Department of Food Science

    - 1991

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    Country: Japan

Professional Memberships 2

  1. 日本農芸化学会

  2. The Molecular Biology Society of JAPAN

 

Papers 55

  1. Glu592 of the axon guidance receptor ROBO3 mediates a pH-dependent interaction with NELL2 ligand Open Access

    Mizutani, K; Toyoda, M; Ojima-Kato, T; Maturana, AD; Niimi, T

    FEBS LETTERS   Vol. 599 ( 4 ) page: 571 - 580   2025.2

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  2. Conformational change of the hairpin-like structured Robo2 ectodomain allows NELL1/2 binding. Reviewed

    1. Miyaguchi, M., Nakanishi, Y., Maturana, A.D., Mizutani, K., and Niimi, T.

    Journal of Molecular Biology   Vol. 434   page: 167777   2022.10

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    Authorship:Last author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: DOI: 10.1016/j.jmb.2022.167777.

  3. Roles of Slit Ligands and Their Roundabout (Robo) Family of Receptors in Bone Remodeling. Invited Reviewed

    Advances in Experimental Medicine and Biology   Vol. 21   page: 143 - 154   2021

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    Language:English  

    DOI: 10.1007/5584_2020_586

    PubMed

  4. Robo2 contains a cryptic binding site for neural EGFL-like (NELL) protein 1/2 Open Access

    Yamamoto, N; Kashiwagi, M; Ishihara, M; Kojima, T; Maturana, AD; Kuroda, S; Niimi, T

    JOURNAL OF BIOLOGICAL CHEMISTRY   Vol. 294 ( 12 ) page: 4693 - 4703   2019.3

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  5. pH依存的な結合性を示す軸索ガイダンス分子群の探索解析

    新美友章

    メディカル・サイエンス・ダイジェスト   Vol. 51 ( 3 ) page: 48 - 49   2025.2

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    Authorship:Corresponding author   Language:Japanese  

  6. 骨形成を促進する新奇因子NELL1の骨誘導分子基盤の解明

    新美友章

    メディカル・サイエンス・ダイジェスト   Vol. 47 ( 2 ) page: 106 - 107   2021.2

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    Authorship:Corresponding author   Language:Japanese  

  7. RBM20 Regulates CaV1.2 Surface Expression by Promoting Exon 9*Inclusion of <i>CACNA1C</i> in Neonatal Rat Cardiomyocytes Open Access

    Morinaga, A; Ito, J; Niimi, T; Maturana, AD

    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES   Vol. 20 ( 22 )   2019.11

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  8. Scaffold protein Enigma Homolog activates CREB whereas a short splice variant prevents CREB activation in cardiomyocytes.

    Ito, J., Iijima, M., Yoshimoto, N., Niimi, T., Kuroda, S., Maturana, A. D.

    Cell. Signal.   Vol. 27   page: 2425-2433   2015.12

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.cellsig.2015.09.007

  9. Mapping the heparin-binding site of the osteoinductive protein NELL1 by site-directed mutagenesis. Reviewed

    Takahashi, K., Imai, A., Iijima, M., Yoshimoto, N., Maturana, A. D., Kuroda, S., and Niimi, T.

    FEBS Letters   Vol. 589   page: 4026-4032   2015.12

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.febslet.2015.11.032

  10. Intracellular trafficking of bio-nanocapsule-liposome complex: Identification of fusogenic activity in the pre-S1 region of hepatitis B virus surface antigen L protein. Reviewed

    Somiya, M., Sasaki, Y., Matsuzaki, T., Iijima, M., Yoshimoto, N., Niimi, T., Maturana, A. D., and Kuroda, S.

    J. Controll. Release   Vol. 212   page: 10-18   2015.8

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.jconrel.2015.06.012

  11. One-step scalable preparation method for non-cationic liposomes with high siRNA content. Reviewed

    Somiya, M., Yamaguchi, K., Liu, Q., Niimi, T., Maturana, A. D., Iijima, M., Yoshimoto, N., and Kuroda, S.

    Int. J. Pharm.   Vol. 490   page: 316-323   2015.7

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.ijpharm.2015.05.072

  12. Virosomes of hepatitis B virus envelope L proteins containing doxorubicin: synergistic enhancement of human liver-specific anti-tumor growth activity by radiotherapy. Reviewed Open Access

    Liu, Q., Jung, J., Somiya, M., Iijima, M., Yoshimoto, N., Niimi, T., Maturana, A. D., Shin, S. H., Jeong, S.-Y., Choi, E. K., and Kuroda, S.

    Int. J. Nanomedicine   Vol. 10   page: 4159-4172   2015.6

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.2147/IJN.S84295

    Open Access

  13. Oligomerization-induced conformational change in the C-terminal region of Nel-like molecule 1 (NELL1) protein is necessary for the efficient mediation of murine MC3T3-E1 cell adhesion and spreading. Reviewed

    Nakamura, Y., Hasebe, A., Takahashi, K., Iijima, M., Yoshimoto, N., Maturana, A. D., Ting, K., Kuroda, S., and Niimi, T.

    J. Biol. Chem.   Vol. 289   page: 9781-9794   2014.4

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

  14. High-throughput de novo screening of receptor agonists with an automated single-cell analysis and isolation system. Open Access

    Yoshimoto, N., Tatematsu, K., Iijima, M., Niimi, T., Maturana, A. D., Fujii, I., Kondo, A., Tanizawa, K., and Kuroda, S.

      Vol. 4   page: 4242   2014

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1038/srep04242

    Open Access

  15. Cell surface-fluorescence immunosorbent assay for real-time detection of hybridomas with efficient antibody secretion at the single-cell level. Anal. Chem. Reviewed

    Kida, A., Iijima, M., Niimi, T., Maturana, A. D., Yoshimoto, N., and Kuroda, S.

    Anal. Chem.   Vol. 85   page: 1753-1759   2013

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  16. Exploring dynamics of molybdate in living animal cells by a genetically encoded FRET nanosensor. Reviewed Open Access

    Nakanishi, Y., Iida, S., Ueoka-Nakanishi, H., Niimi, T., Tomioka, R., and Maeshima, M.

    PLoS One.   Vol. 8   page: e58175   2013

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1371/journal.pone.0058175

    Open Access

  17. An automated system for high-throughput single cell-based breeding. Reviewed Open Access

    Yoshimoto, N., Kida, A., Jie, X., Kurokawa, M., Iijima, M., Niimi, T., Maturana, A. D., Nikaido, I., Ueda, H. R., Tatematsu, K., Tanizawa, K., Kondo, A., Fujii, I., and Kuroda, S.

    Sci. Rep.   Vol. 3   page: 1191   2013

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1038/srep01191

    Open Access

  18. Nanocapsule-based probe for evaluating the orientation of antibodies immobilized on a solid phase. Reviewed

    Iijima, M., Yoshimoto, N., Niimi, T., Maturana, A. D., and Kuroda, S.

    Analyst.   Vol. 138   page: 3470-3477   2013

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1039/c3an00481c

  19. Bio-nanocapsules for signal enhancement of alkaline phosphatase-linked immunosorbent assays. Reviewed

    Iijima, M., Yamamoto, M., Yoshimoto, N., Niimi, T., and Kuroda, S.

    Biosci. Biotechnol. Biochem.   Vol. 77   page: 843-846   2013

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  20. Nano-visualization of oriented-immobilized IgGs on immunosensors by high-speed atomic force microscopy Open Access

    Iijima, M., Somiya, M., Yoshimoto, N., Niimi, T., and Kuroda, S. (2012). Nano-visualization of oriented-immobilized IgGs on immunosensors by high-speed atomic force microscopy.

    Sci. Rep.   Vol. 2   page: 790   2012

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1038/srep00790

    Open Access

  21. NELL-1 promotes cell adhesion and differentiation via Integrin β1 Reviewed

    Shen, J., James, A. W., Chung, J., Lee, K., Zhang, J. B., Ho, S., Lee, K. S., Kim, T. M., Niimi, T., Kuroda, S., Ting, K., and Soo

    J. Cell. Biochem.   Vol. 113   page: 3620-3628   2012

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  22. The C-terminal region of NELL1 mediates osteoblastic cell adhesion through integrin α3β1 Reviewed Open Access

    Hasebe, A., Nakamura, Y., Tashima, H., Takahashi, K., Iijima, M., Yoshimoto, N., Ting, K., Kuroda, S., and Niimi, T.

    FEBS Lett.   Vol. 586   page: 2500-2506   2012

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.febslet.2012.06.014

  23. Engineered bio-nanocapsules, hepatitis B virus surface antigen L protein particles, for in vivo active targeting to splenic dendritic cells. Reviewed

    Matsuo, H., Yoshimoto, N., Iijima, M., Niimi, T., Jung, J., Jeon, S.-Y., Choi, E. K., Sewaki, T., Arakawa, T., and Kuroda, S.

    Int. J. Nanomedicine.   Vol. 7   page: 3341-3350   2012

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  24. Targeting of polyplex to human hepatic cells by bio-nanocapsules, hepatitis B virus surface antigen L protein particles Reviewed

    Somiya, M., Yoshimoto, N., Iijima, M., Niimi, T., Dewa, T., Jung, J., and Kuroda, S.

    Bioorg. Med. Chem.   Vol. 20   page: 3873-3879   2012

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.bmc.2012.04.031

  25. Hepatitis B virus envelope L protein-derived bio-nanocapsules: Mechanisms of cellular attachment and entry into human hepatic cells Reviewed

    Yamada, M., Oeda, A., Jung, J. Iijima, M., Yoshimoto, N., Niimi, T., Jeong, S.-Y., Choi, E. K., Tanizawa, K., and Kuroda, S.

    J. Control. Release   Vol. 160   page: 322-329   2012

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.jconrel.2011.11.004

  26. Efficient production and characterization of recombinant human NELL1 protein in human embryonic kidney 293-F cells. Reviewed

    Hasebe, A., Tashima, H., Ide, T., Iijima, M., Yoshimoto, N., Ting, K., Kuroda, S., and Niimi, T.

    Mol. Biotechnol.   Vol. 51   page: 58-66   2012

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

  27. Nanocapsules incorporating IgG Fc-binding domain derived from Staphylococcus aureus protein A for displaying IgGs on immunosensor chips Reviewed

    Iijima, M., Kadoya, H., Hatahira, S., Hiramatsu, S., Jung, G., Martin, A., Quinn, J., Jung, J., Jeong, S. Y., Choi, E. K., Arakawa, T., Hinako, F., Kusunoki, M., Yoshimoto, N., Niimi, T., Tanizawa, K., and Kuroda, S.

    Biomaterials   Vol. 32   page: 1455-1464   2011

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.biomaterials.2010.10.057

  28. Fluorophore-labeled nanocapsules displaying IgG Fc-binding domains for the simultaneous detection of multiple antigens. Reviewed

    Iijima, M., Matsuzaki, T., Yoshimoto, N., Niimi, T., Tanizawa, K., and Kuroda, S.

    Biomaterials   Vol. 32   page: 9011-9020   2011

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.biomaterials.2011.08.012

  29. Efficient and rapid purification of drug- and gene-carrying bio-nanocapsules, hepatitis B virus surface antigen L particles, from Saccharomyces cerevisiae Reviewed

    Jung, J., Iijima, M., Yoshimoto, N., Sasaki, M., Niimi, T., Tatematsu, K., Jeong, S.-Y., Choi, E. K., Tanizawa, K., and Kuroda, S.

    Protein Expr. Purif.   Vol. 78   page: 149-155   2011

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.pep.2011.04.008

  30. Hepatic stellate cells stimulate HCC cell migration via laminin-5 production Reviewed Open Access

    Santamato, A., Fransvea, E., Dituri, F., Caligiuri, A., Quaranta, M., Niimi, T., Pinzani, M., Antonaci, S., and Giannelli, G.

    Clin. Sci.   Vol. 121   page: 159-168   2011

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1042/CS20110002

  31. *The production of recombinant human laminin-332 in a Leishmania tarentolae expression system Reviewed

    Phan, H.P., Sugino, M. and Niimi, T.

    Protein Expr. Purif.   Vol. 68   page: 79-84   2009

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.pep.2009.07.005

  32. Novel Culture System of Mesenchymal Stromal Cells from Human Subcutaneous Adipose Tissue Reviewed

    Iwashima, S., Ozaki, T., Maruyama, S., Saka, Y., Kobori, M., Omae, K., Yamaguchi, H., Niimi, T., Toriyama, K., Kamei, Y., Torii, S., Murohara, T., Yuzawa, Y., Kitagawa, Y. and Matsuo, S.

    Stem Cells Dev.   Vol. 18   page: 533-543   2009

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1089/scd.2008.0358

  33. *Transcriptional activation of the human claudin-18 gene promoter through two AP-1 motifs in PMA-stimulated MKN45 gastric cancer cells Reviewed

    Yano, K., Imaeda, T., and Niimi, T.

    Am. J. Physiol. Gastrointest. Liver Physiol.   Vol. 294   page: G336-G343   2008

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1152/ajpgi.00328.2007

  34. Expression of secretoglobin3A2 (SCGB3A2) in primary pulmonary carcinomas Reviewed

    Tachihara-Yoshikawa, M., Ishida, T., Watanabe, K., Sugawara, A., Kanazawa, K., Kanno, R., Suzuki, T., Niimi, T., Kimura, S. and Munakata, M.

    Fukushima J. Med. Sci.   Vol. 54   page: 61-72   2008

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  35. *Expression and chain assembly of human laminin-332 in an insect cell-free translation system Reviewed Open Access

    Phan, H.-P., Ezure, T., Ito, M., Kadowaki, T., Kitagawa, Y., and Niimi, T.

    Biosci. Biotechnol. Biochem.   Vol. 72   page: 1847-1852   2008

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1271/bbb.80108

    Open Access

  36. Cryptic fragment alpha4 LG4-5 derived from laminin alpha4 chain inhibits de novo adipogenesis by modulating the effect of fibroblast growth factor-2 Reviewed

    Yamashita, H., Goto, C., Tajima, R., Koparal, A. T., Kobori, M., Ohki, K., Shitara, K., Narita, R., Toriyama, K., Torii, S., Niimi, T., and Kitagawa, Y.

    Develop. Growth Differ.   Vol. 50   page: 97-107   2008

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  37. Identification and expression of alternative splice variants of the mouse Ppp1r3b gene in lung epithelial cells Reviewed

    Niimi, T., Kurotani, R., Kimura, S., and Kitagawa, Y.

    Biochem. Biophys. Res. Commun.   Vol. 349   page: 588-596   2006

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.bbrc.2006.08.091

  38. The Sp family of transcription factors regulates the human laminin alpha 1 gene in JAR choriocarcinoma cells Reviewed

    Niimi, T., Hayashi, Y., Sekiguchi, K., and Kitagawa, Y.

    Biochim. Biophys. Acta.   Vol. 1759   page: 573-579   2006

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

  39. Induction of uteroglobin-related protein 2 (Ugrp2) gene expression by the Th2 cytokines IL-4 and IL-13 Reviewed Open Access

    Yamada, A., Sheikh, F., Niimi, T., DeMayo, F. J., Keegan, A. D., Donnelly, R. P., Kimura, S.

    J. Immunol.   Vol. 175   page: 5708-5715   2005

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.4049/jimmunol.175.9.5708

  40. SOX7 and SOX17 regulate the parieetal endoderm-specific enhancer activity of mouse laminin a1 gene Reviewed

    Niimi, T., Hayashi, Y., Futaki, S., and Sekiguchi, K.

    J. Biol. Chem   Vol. 279 ( 36 ) page: 38055-38061   2004

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  41. Identification of an upstream enhancer in the mouse laminin alpha1 gene defining its high level of expression in parietal endoderm cells Reviewed

    Niimi, T. Hayashi, Y., and Sekiguchi, K.

    J. Biol. Chem.   Vol. 14   page: 9332-9338   2003

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  42. A polymorphism in the human UGRP1 gene promoter that regulates transcription is associated with an increased risk of asthma Reviewed Open Access

    Niimi, T., Munakata, M., Keck-Waggoner, C. L., Popescu, N. C., Levitt, R. C., Hisada, M., and Kimura, S.

    Am. J. Hum. Genet.   Vol. 70   page: 718-725   2002

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1086/339272

  43. Cloning, expression, and chromosomal localization of the mouse gene (Scgb3a1, alias Ugrp2) that encodes a member of the novel uteroglobin-related protein gene family Reviewed Open Access

    Niimi, T., Copeland, N. G., Gilbert, D. J., Jenkins, N. A., Srisodsai, A., Zimonjic, D. B., Keck-Waggoner, C. L., Popescu, N. C., and Kimura, S.

    Cytogenet. Genome Res.   Vol. 97   page: 120-127   2002

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1159/000064067

  44. claudin-18, a novel downstream target gene for the T/EBP/NKX2.1 homeodomain transcription factor, encodes lung-and stomach-specific isoforms through alternative splicing Reviewed

    Niimi, T., Nagashima, K., Ward, J. M., Minoo, P., Zimonjic, D. B., Popescu, N. C., and Kimura, S.

    Mol. Cell. Biol.   Vol. 21   page: 7380-7390   2001

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  45. UGRP1, a uteroglobin/clara cell secretory protein-related protein, is a novel lung-enriched downstream target gene for the T/EBP?NKX2.1 homeodomain transcription factor Reviewed

    Niimi, T., Keck-Waggoner, C. L., Popescu, N. C., Zhou, Y., Levitt, R. C., and Kimura, S.

    Molecular Endocrinology   Vol. 15   page: 2021-2036   2001

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

  46. Differential expression of mRNAs encoding laminin chain variants during in vitro development of mouse blastocysts Reviewed

    Azimi, M., Niimi, T., Yoshida, N., and Kitagawa, Y.

    Cytotechnology   Vol. 31   page: 183-191   1999

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1023/A:1008084508489

  47. A drosophila gene encoding multiple splice variants of Kazal-type serine protease inhibitor-like proteins with potential destinations of mitochondria, cytosol and the secretory pathway Reviewed

    Niimi, T., Yookoyama, H., Goto, A., Beck, K., and Kitagawa, Y.

    Eur. J. Biochem.   Vol. 266   page: 282-292   1999

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  48. Brachyury (T) expression in embryonal carcinoma P19 cells resembles its expression in primitive streak and tail-bud but not that in notochord Reviewed

    Yamaguchi, H., Niimi, T., Kitagawa, Y., and Miki, K.

    Develop. Growth Differ.   Vol. 41   page: 253-264   1999

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1046/j.1440-169x.1999.413427.x

  49. Distinct roles of mouse laminin beta1 long arm domains for alpha1beta1gamma1 trimer formation Reviewed

    Niimi, T. and Kitagawa, Y.

    FEBS Letters   Vol. 400   page: 71-74   1997

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  50. 多様なラミニン分子の形成機構

    新美友章、熊谷知乃、北川泰雄

    生体の科学   Vol. 48   page: 260-267   1997

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    Authorship:Lead author   Language:Japanese  

    DOI: 10.11477/mf.2425901202

  51. Differentiation-dependent expression of laminin-8 (alpha4beta1gamma1) mRNAs in mouse 3T3-L1 adipocytes Reviewed

    Niimi, T., Kumagai, C., Okano, M., and Kitagawa, Y.

    Matrix Biology   Vol. 16   page: 223-230   1997

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  52. Expression of the long arm sequence of mouse laminin alpha1, beta1, or gamma1 chain in COS1 cells and assembly of monkey-mouse hybrid laminin Reviewed

    Niimi, T., Miki, K., and Kitagawa, Y.

    J. Biochem   Vol. 121   page: 854-861   1997

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  53. alpha-へリックス鎖間会合の特異性と互換性-ラミニン異型体の形成機構を中心に- Open Access

    北川泰雄、新美友章、熊谷知乃、岡野正樹

    生物物理   Vol. 35   page: 63-69   1995

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    Language:Japanese  

    DOI: 10.2142/biophys.35.63

    Open Access

  54. Regulated expression of an osteonectin variant in bovine aortic endothelial cells Reviewed

    Jeon, H., Niimi, T., Taniguchi, Y., Miki, K., and Kitagawa, Y.

    Biosci. Biotech. Biochem.   Vol. 58 ( 10 ) page: 1889-1891   1994

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  55. The protective role of polyphenols in cytotoxicity of hydrogen peroxide Reviewed

    Nakayama, T., Niimi, T., Osawa, T., and Kawakishi, S.

    Mutation Research   Vol. 281   page: 77-80   1992

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Books 6

  1. Leishmania tarentolae for the production of multi-subunit complexes, Advances in Experimental Medicine and Biology.

    Niimi, T.( Role: Contributor)

    Springer  2016 

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    Language:English Book type:Scholarly book

  2. Recombinant protein production in the eukaryotic protozoan parasite Leishmania tarentolae: A review. In: Recombinant Gene Expression: Reviews and Protocols, Third Edition, Methods in Molecular Biology.

    Niimi, T.( Role: Sole author)

    Humana Press  2012 

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    Language:English

  3. Expression of multi-subunit proteins in Leishmania tarentolae. In: Recombinant Gene Expression: Reviews and Protocols, Third Edition, Methods in Molecular Biology.

    Sugino, M. and Niimi, T. ( Role: Joint author)

    Humana Press  2012 

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    Language:Japanese

  4. 細胞外マトリックス-基礎と臨床 「基底膜に存在する糖タンパク質」

    熊谷知乃、新美友章、北川泰雄( Role: Joint author)

    愛智出版  2000 

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    Language:Japanese

  5. Extracellular Matrix-Cellular Interaction: Molecules to Diseases"Role of interchain disulfide-bonding in dimer-trimer switch during laminin heterotrimer assembry."

    kitagawa, Y., Niimi, T., and Kumagai, C.( Role: Joint author)

    Japan Sci. Soc. Press, Tokyo/ S. Karger, Basel  1998 

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    Language:English

  6. Animal Cell Technology; Basic & Applied Aspects"Laminin chains expressed in human keratinocytes, mouse 3T3-L1 adipocytes and mouse embryonal carcinoma F9."

    Niimi, T., Kumagai, C., Azimi, M., and Kitagawa, Y.( Role: Joint author)

    Kluwe Academic Publisher, Dordrecht  1997 

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    Language:English

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Presentations 1

  1. 骨分化誘導タンパク質NELL1の新奇受容体候補Robo2の構造特性解析

    宮口昌樹、中西洋一、新美友章

    第44回日本分子生物学会年会  2021.12 

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    Event date: 2021.12

    Language:Japanese   Presentation type:Poster presentation  

    Venue:パシフィコ横浜  

Research Project for Joint Research, Competitive Funding, etc. 1

  1. タイトジャンクション構成蛋白質・クローディン-18a2を指標にした胃癌の新しい分子標的療法の開発

    2006.4 - 2007.3

    上原記念生命科学財団 

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    Grant type:Competitive

KAKENHI (Grants-in-Aid for Scientific Research) 8

  1. 膜性腎症における抗NELL1抗体のエピトープ解析と腎炎惹起性NELL1ドメインの探索

    Grant number:25K11511  2025.4 - 2028.3

    科学研究費助成事業  基盤研究(C)

    林 憲史, 新美 友章

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    Authorship:Coinvestigator(s) 

    Neural epidermal growth factor-like 1 protein (NELL1)は2021年に膜性腎症の新規抗原として報告されたが、その病態形成機序は不明である。本研究は、組み換えNELL1タンパクを用いて患者血清中の抗NELL1抗体のエピトープを解析すること、さらにエピトープタンパクをマウスに投与しNELL1陽性膜性腎症モデルマウスを作製し、NELL1陽性膜性腎症の病態形成機序解明の一旦を担うことを目標とする。

  2. 脳内pH低下に伴うNELL-ROBOシグナルの変容と神経細胞機能の統合的理解

    Grant number:24K08712  2024.4 - 2027.3

    科学研究費助成事業  基盤研究(C)

    新美 友章, 水谷 公彦

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\4680000 ( Direct Cost: \3600000 、 Indirect Cost:\1080000 )

    神経軸索誘導分子であるNELL-ROBO複合体のpH依存的な結合について、脳内における生理学的意義を解明するために、pH変化に伴うNELL-ROBO複合体の構造特性解析、および NELL-ROBOシグナルの変容が神経細胞機能に及ぼす影響の解析を行い、これらが脳内pHの低下と精神・神経疾患を関連付ける傍証となり得るのか検証することを試みる。
    脳内pHの変化は、脳内の遺伝子発現をはじめとする様々な生物学的プロセスに関わっていると考えられ、近年では統合失調症などの精神疾患と関連していることを示唆する研究結果が増えてきているが、脳の酸性度がこれらの疾患に及ぼす影響の詳細はわかっていない。我々は、神経軸索誘導に関わるNELLリガンドとその受容体であるROBOファミリーの結合がpHの低下に伴って増強されることを発見し、このようなpH依存的なリガンド-受容体の相互作用が、脳の酸性化が見られる疾患に少なからず関係していると考え、本研究では、神経軸索誘導分子群のリガンド-受容体複合体のpH依存的な結合特性を解析すること、およびpH変化に伴うシグナルの変容が神経細胞機能に及ぼす影響を解析することを目的とした。
    昨年度は、おもに神経軸索誘導に関わる分子群を対象に、酸性条件で結合性が変化するリガンド-受容体ペアの探索を行い、SLIT-ROBO系、Semaphorin-Plexin系、Ephrin-Eph系、およびNetrin-DCC/Unc5系のおもな遺伝子の発現ベクターへのクローニング、組換えタンパク質の発現、結合アッセイによるスクリーニングを終え、酸性で結合性が変化する複数のリガンド-受容体ペアを同定した。さらに、これらのリガンド-受容体の複合体形成における結合部位の解析、および酸性条件下で結合性が変化するメカニズムについての解析を進めた。これらの研究成果は、pH依存的なリガンド-受容体の相互作用がNELL-ROBO系だけに留まらず、他の神経軸索誘導分子群に広く存在していることを示しており、pH低下によるネガティブな影響のみならず、pHによるシグナル伝達制御機構が存在することをも示唆している。
    当初の目論見通り、酸性条件下で結合性が変化するリガンド-受容体複合体が、神経軸索誘導分子群において、複数発見された。これらの中には、酸性で結合性が低下するものと、酸性で結合性が上昇するものが含まれている。現在、これらのリガンド-受容体の複合体形成における結合部位の解析、および酸性条件下で結合性が変化するメカニズムについての解析を進めており、研究の進捗状況は概ね順調である。
    神経軸索誘導分子群のリガンド-受容体複合体のpH依存的な結合特性の解析を進める。NELL-ROBO系については、ROBO1、ROBO2、ROBO3のpH依存的な結合特性の比較解析を行う。新たに同定されたリガンド-受容体複合体については、複合体形成における結合部位の解析、および酸性で結合性が変化するメカニズムについて解析を進めているが、当然ながらタンパク質毎に固有のメカニズムが存在していると思われ、結合性が強いものから弱いものまであるため、個別に解析を進める方向とし、興味深い複合体に関しては、結晶構造解析を行うことを検討する。
    pH変化に伴う神経軸索誘導分子のシグナル変容が神経細胞機能に及ぼす影響の解析については、まずはpH変化に寛容な培養細胞系を用いて実験系の確立を試みる予定である。

  3. Functional analysis of a novel NELL-Robo signaling system in osteogenesis

    Grant number:20H02948  2020.4 - 2024.3

    Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (B)

    Niimi Tomoaki

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\17550000 ( Direct Cost: \13500000 、 Indirect Cost:\4050000 )

    The NELL1 gene was originally identified in craniosynostosis patients as being specifically upregulated within prematurely fusing sutures. Because of its potent osteoinductive activity, NELL1 protein may be useful for bone regeneration therapy. However, there is little knowledge regarding NELL1-mediated signaling pathways. In this study, we focused on the property that NELL1 and its novel receptor, ROBO2, bind only in acidic conditions to elucidate the signaling mechanism of the NELL-ROBO complex. The results revealed that the NELL1/2 and ROBO1/2/3 families bind in a pH-dependent manner, suggesting the existence of a pH-dependent signal transduction regulatory mechanism.

  4. Elucidation of the molecular basis of the bone-inducing factor NELL1

    Grant number:17K01946  2017.4 - 2021.3

    Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (C)

    Niimi Tomoaki

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    Authorship:Principal investigator 

    Grant amount:\4680000 ( Direct Cost: \3600000 、 Indirect Cost:\1080000 )

    The NELL1 gene was originally identified in craniosynostosis patients as being specifically upregulated within prematurely fusing sutures. Because of its potent osteoinductive activity, NELL1 protein may be useful for bone regeneration therapy. However, there is little knowledge regarding NELL1 receptors and NELL1-mediated signaling pathways. IAs a result of exploring the NELL1 receptor and elucidating the signal transduction mechanism, we identified Roundabout 2 (Robo2), which is mainly expressed in mesenchymal cells, as a novel receptor for NELL1. Furthermore, we elucidated the mode of ligand-receptor binding only under acidic conditions and suggested that it may act as a new bone formation signal.

  5. NELL1タンパク質を利用した新規骨形成因子の創成

    2014.4 - 2017.3

    科学研究費補助金  基盤研究(C)

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    Authorship:Principal investigator 

  6. 酵母で量産したヒト型ラミニンによる再生医療の新展開

    2007.3 - 2010.3

    科学研究費補助金  基盤研究(S)

    新美友章

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  7. 酵母で量産したヒト型ラミニンによる再生医療の新展開

    2006.4 - 2007.3

    科学研究費補助金  基盤研究(S)

    北川泰雄

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    Authorship:Coinvestigator(s) 

  8. 肺および甲状腺特異的転写因子Nkx2.1とその下流遺伝子による器官形成と機能調節

    2005.4 - 2007.3

    科学研究費補助金  若手研究(B),課題番号:17780250

    新美 友章

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Teaching Experience (On-campus) 15

  1. Advanced Molecular Cell Biology 2

    2025

  2. Biochemistry 2

    2025

  3. Molecular Cell Biology 4

    2025

  4. Biostatistics Exercise

    2025

  5. Laboratory in Chemistry

    2025

  6. 生物情報処理演習(生命)

    2024

  7. 化学実験

    2024

  8. 分子細胞生物学4

    2024

  9. 分子細胞生物学特論II

    2021

  10. 分子細胞生物学特論II

    2020

  11. 生物情報処理演習

    2019

  12. 分子細胞生物学特論II

    2019

  13. 基礎セミナーA

    2019

  14. 分子細胞生物学特論II

    2018

  15. 生物情報処理演習

    2018

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Academic Activities 1

  1. 日本農芸化学会中部支部庶務幹事

    Role(s):Planning, management, etc.

    2020.4 - 2022.3

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    Type:Academic society, research group, etc.