名城大学農学部非常勤講師

2003

名古屋女子大学家政学部　非常勤講師

2003

名古屋大学大学院生命農学研究科 助手

2001.4 - 2007.3

School of Environmental Science, University of Shiga Prefecture (Assist. Prof.)

1996.4 - 2001.3

名古屋大学農学研究科 日本学術振興会特別研究員

1992.4 - 1994.3

Arctic Plant Responses to Summer Climates and Flooding Events: A Study of Carbon and Nitrogen-Related Larch Growth and Ecosystem Parameters in Northeastern Siberia Reviewed International coauthorship

Liang, Maochang Sugimoto, Atsuko Tei, Shunsuke Takano, Shinya Morozumi, Tomoki Shingubara, Ryo Murase, Jun Maximov, Trofim C.

Journal of Geophysical Research: Biogeosciences   Vol. 128   page： e2022JG007135   2023

Estimating Yield-Related Traits Using UAV-Derived Multispectral Images to Improve Rice Grain Yield Prediction Reviewed

Bascon Maria Victoria, Nakata Tomohiro, Shibata Satoshi, Takata Itsuki, Kobayashi Nanami, Kato Yusuke, Inoue Shun, Doi Kazuyuki, Murase Jun, Nishiuchi Shunsaku

AGRICULTURE-BASEL   Vol. 12 ( 8 )   2022.8

eDNA解析を利用した土壌微生物機能への太陽熱土壌消毒の影響評価法 Reviewed

浅川晋、村瀬潤、篠原陽子

日本土壌肥料学雑誌   Vol. 92 ( 6 ) page： 476 - 480   2021.12

土壌に関する政府間技術パネル(ITPS)作業グループ会合報告 Invited

村瀬　潤

日本土壌肥料学会誌   Vol. 92 ( 6 ) page： 501 - 502   2021.12

Soil texture and properties rather than irrigation water type shape the diversity and composition of soil microbial communities Reviewed International coauthorship

Obayomi Olabiyi, Seyoum Mitiku Mihiret, Ghazaryan Lusine, Tebbe Christoph C., Murase Jun, Bernstein Nirit, Gillor Osnat

APPLIED SOIL ECOLOGY   Vol. 161   2021.5

Top-down effects of protists are greater than bottom-up effects of fertilisers on the formation of bacterial communities in a paddy field soil International coauthorship

Asiloglu Rasit, Kenya Kobayashi, Samuel Solomon Oloruntoba, Sevilir Bahar, Murase Jun, Suzuki Kazuki, Harada Naoki

Soil Biology and Biochemistry   Vol. 156   2021.5

Effect of protists on rhizobacterial community composition and rice plant growth in a biochar amended soil Reviewed International coauthorship

Asiloglu Rasit, Sevilir Bahar, Samuel Solomon Oloruntoba, Aycan Murat, Akca Muhittin Onur, Suzuki Kazuki, Murase Jun, Turgay Oguz Can, Harada Naoki

BIOLOGY AND FERTILITY OF SOILS   Vol. 57 ( 2 ) page： 293 - 304   2021.2

Biochar affects taxonomic and functional community composition of protists Reviewed International coauthorship

Asiloglu Rasit, Samuel Solomon Oloruntoba, Sevilir Bahar, Akca Muhittin Onur, Bozkurt Pinar Acar, Suzuki Kazuki, Murase Jun, Turgay Oguz Can, Harada Naoki

BIOLOGY AND FERTILITY OF SOILS   Vol. 57 ( 1 ) page： 15 - 29   2021.1

Soil: the great connector of our lives now and beyond COVID-19 Reviewed International coauthorship

Poch Rosa M., dos Anjos Lucia H. C., Attia Rafla, Balks Megan, Benavides-Mendoza Adalberto, Bolanos-Benavides Martha M., Calzolari Costanza, Chabala Lydia M., de Ruiter Peter C., Francke-Campana Samuel, Prechac Fernando Garcia, Graber Ellen R., Halavatau Siosiva, Hassan Kutaiba M., Hien Edmond, Jin Ke, Khan Mohammad, Konyushkova Maria, Lobb David A., Moshia Matshwene E., Murase Jun, Nziguheba Generose, Patra Ashok K., Pierzynski Gary, Eugenio Natalia Rodriguez, Rojas Ronald Vargas

SOIL   Vol. 6 ( 2 ) page： 541 - 547   2020.11

Susceptibility and resilience of the soil ciliate community to high temperatures Reviewed

Oshima Takaaki, Shinohara Yoko, Asakawa Susumu, Murase Jun

SOIL SCIENCE AND PLANT NUTRITION   Vol. 66 ( 6 ) page： 870 - 877   2020.11

Involvement of microaerophilic iron-oxidizing bacteria in the iron-oxidizing process at the surface layer of flooded paddy field soil Reviewed

Nakagawa Koki, Murase Jun, Asakawa Susumu, Watanabe Takeshi

JOURNAL OF SOILS AND SEDIMENTS   Vol. 20 ( 11 ) page： 4034 - 4041   2020.11

Protist-enhanced survival of a plant growth promoting rhizobacteria, Azospirillum sp. B510, and the growth of rice ( Oryza sativa L.) plants

Asiloglu Rasit, Shiroishi Keiko, Suzuki Kazuki, Turgay Oguz Can, Murase Jun, Harada Naoki

APPLIED SOIL ECOLOGY   Vol. 154   page： 103599   2020.10

Methane oxidation potential of the arctic wetland soils of a taiga-tundra ecotone in northeastern Siberia Reviewed International coauthorship

Murase Jun, Sugimoto Atsuko, Shingubara Ryo, Liang Maochang, Morozumi Tomoki, Takano Shinya, Maximov Trofim C.

SOIL SCIENCE AND PLANT NUTRITION   Vol. 66 ( 4 ) page： 645 - 652   2020.7

田んぼの中の原生生物たちの暮らし Invited Reviewed

村瀬　潤

土と微生物   Vol. 74 ( 1 ) page： 26 - 31   2020.4

Invention of Artificial Rice Field Soil: A Tool to Study the Effect of Soil Components on the Activity and Community of Microorganisms Involved in Anaerobic Organic Matter Decomposition

Maeda Yu, Mise Kazumori, Iwasaki Wataru, Watanabe Akira, Asakawa Susumu, Asiloglu Rasit, Murase Jun

MICROBES AND ENVIRONMENTS   Vol. 35 ( 4 )   2020

Diversity of 2-MIB-Producing Cyanobacteria in Lake Ogawara: Microscopic and Molecular Ecological Approaches. Reviewed

Shizuka, K., Ikenaga, M., Murase, J., Nakayama, N., Kakino, W., Taruya, H., & Maie, N.

Aquatic Science   Vol. 68   page： 9 - 23   2020

水田への魚類の遡上を促す遡上板の開発 Reviewed

皆川明子、若宮慎二、竹下邦明、佐川志朗、河口洋一、村瀬潤、都築隆禎、深澤洋二、江崎保男

応用生態工学   Vol. 23 ( 1 ) page： 79 - 84   2020

Usability of water surface reflectance for the determination of riverine dissolved methane during extreme flooding in northeastern Siberia

Morozumi Tomoki, Shingubara Ryo, Murase Jun, Nagai Shin, Kobayashi Hideki, Takano Shinya, Tei Shunsuke, Fan Rong, Maximov Trofim C., Sugimoto Atsuko

POLAR SCIENCE   Vol. 21   page： 186 - 194   2019.9

Multi-year effect of wetting on CH4 flux at taiga-tundra boundary in northeastern Siberia deduced from stable isotope ratios of CH4

Shingubara Ryo, Sugimoto Atsuko, Murase Jun, Iwahana Go, Tei Shunsuke, Liang Maochang, Takano Shinya, Morozumi Tomoki, Maximov Trofim C.

BIOGEOSCIENCES   Vol. 16 ( 3 ) page： 755-768   2019.2

Microhabitat segregation of heterotrophic protists in the rice (Oryza sativa L.) rhizosphere

Asiloglu Rasit, Murase Jun

RHIZOSPHERE   Vol. 4   page： 82 - 88   2017.12

Quest of Soil Protists in a New Era

Murase Jun

MICROBES AND ENVIRONMENTS   Vol. 32 ( 2 ) page： 99 - 102   2017.6

Response of the protistan community of a rice field soil to different oxygen tensions (vol 92, fiw104, 2016)

Takenouchi Yuriko, Iwasaki Kazufumi, Murase Jun

FEMS MICROBIOLOGY ECOLOGY   Vol. 93 ( 5 )   2017.5

Fluctuations in the abundance of ammonia oxidizers and the contents of inorganic nitrogen in solarized soil

Yamagata Mina, Shinohara Yoko, Maesaka Masahiro, Murase Jun, Asakawa Susumu

SOIL SCIENCE AND PLANT NUTRITION   Vol. 63 ( 5 ) page： 434-440   2017

Response of the protistan community of a rice field soil to different oxygen tensions Reviewed

Takenouchi, Y., Iwasaki, K., Murase, J.

FEMS Microbiology Ecology     2016

Active community structure of microeukaryotes in a rice (Oryza sativa L.) rhizosphere revealed by RNA-based PCR-DGGE Reviewed

Asiloglu, R., Murase, J.

Soil Science and Plant Nutrition   Vol. 62   page： 440-446   2016

Impact of long-term fertilizer treatment on the microeukaryotic community structure of a rice field soil. Reviewed

Murase, J., Hida, A., Ogawa, K., Nonoyama, T., Yoshikawa, N., Imai, K.

Soil Biology and Biochemistry   Vol. 80   page： 237-243   2015

Impact of soil solarization on the ciliate community structure of a greenhouse soil. 61, 927-933 (2015) Reviewed

Yokoe, K., Maesaka, M., Murase, J., Asakawa, S

Soil Sci. Plant Nutr.   Vol. 61   page： 641-652   2015

Impact of soil solarization on the ciliate community structure of a greenhouse soil. Reviewed

Murase, J., Shinohara, Y., Yokoe, K., Matsuda, R., Asakawa, S., Hashimoto, T.

  Vol. 60 ( 4 ) page： 927-933   2015

Community structure of microeukaryotes in a rice rhizosphere revealed by DNA-based PCR-DGGE. Reviewed

Asiloglu, R., Honjo, H., Saka, N., Asakawa, S., Murase, J.

Soil Sci Plant Nutr   Vol. 61   page： 761-768   2015

Abundance and composition of ammonia oxidizers in response to degradation of root cap cells of rice in soil microcosms. Reviewed

Li, Y., Watanabe, T., Murase, J., Asakawa, S., Kimura, M.

Journal of soils and sediments   Vol. 14   page： 1587-1598   2014

Branched and isoprenoid glycerol dialkyl glycerol tetraethers in soils and lake/river sediments in Lake Biwa basin and implications for MBT/CBT proxies. Reviewed

Ajioka, T., Yamamoto, M., Murase, J.

Organic Geochemistry   Vol. 73   page： 70-82   2014

Low nitrogen fertilization adapts rice root microbiome to low nutrient environment by changing biogeochemical functions. Reviewed

Ikeda, S., Sasaki, K., Okubo, T., Yamashita, A., Terasawa, K., Bao, Z., Liu, D., Watanabe, T., Murase, J., Asakawa, S., Eda, S., Mitsui, H., Sato, T., Minamisawa, K.

Microbes and Environments   Vol. 29   page： 50-59   2014

Growth of hydrogenotrophic and acetoclastic methanogens on substrate from rice plant callus cells in anaerobic soil: an estimation to the role of slough-off root cap cells to their growth Reviewed

Li Y, Watanabe T, Murase J, Asakawa S, Kimura M

  Vol. 59   page： 548-558   2013

Identification of the major capsid gene (g23) of T4-type bacteriophages that assimilate substrates from root cap cells under aerobic and anaerobic soil conditions using a DNA-SIP approach Reviewed

Li Y, Watanabe T, Murase J, Asakawa S, Kimura M

  Vol. 63   page： 97-105   2013

安定同位体プロービング(SIP)法で探る水田土壌の物質動態と微生物 Invited Reviewed

村瀬　潤

　土と微生物　67, 39-46 (2013)   Vol. 67   page： 39-46   2013

Growth of hydrogenotrophic and acetoclastic methanogens on substrate from rice plant callus cells in anaerobic soil: an estimation to the role of slough-off root cap cells to their growth. Reviewed

Li, Y., Watanabe, T., Murase, J., Asakawa, S., Kimura, M.

Soil Sci. Plant Nutr.   Vol. 59   page： 548-558   2013

Growth of methanogens in an oxic soil microcosm: Elucidation by a DNA-SIP experiment using 13C-labeled dried rice callus. Reviewed

Li, Y, Lee CG, Watanabe T, Murase J, Asakawa S, Kimura M

  Vol. 58   page： 37-44   2012

Phylogenetic diversity of microturbellarians in Japanese rice paddy fields, with special attention to the genus Stenostomum. Reviewed

Yamazaki, M, Murase, J, Asakawa, S, Kimura, M

Soil Science and Plant Nutrition   Vol. 58   page： 11-23   2012

Incorporation of plant residue-derived carbon into the microeukaryotic community in a rice field soil revealed by DNA stable-isotope probing. Reviewed

Murase J, Shibata M, Lee CG, Watanabe T, Asakawa S, Kimura M

  Vol. 79   page： 371-379   2012

北方湿地生態系からのメタン放出に及ぼす積雪の影響 Invited Reviewed

村瀬　潤

低温科学   Vol. 70   page： 131-136   2012

Identification of microbial communities that assimilate substrate from root cap cells in an aerobic soil using a DNA-SIP approach. Reviewed

Li, Y, Lee CG, Watanabe T, Murase J, Asakawa S, Kimura M

Soil Biology & Biochemistry   Vol. 43   page： 1928-1935   2011

Assimilation of glucose-derived carbon into methanogenic archaea in soil under unflooded condition. Reviewed

Watanabe T, Wang G, Taki K, Lee CG, Murase J, Asakawa S, Kimura M

Applied Soil Ecology   Vol. 48   page： 201-209   2011

A new thermophilic heterolobosean amoeba, Fumarolamoeba ceborucoi, gen. nov., sp. nov., isolated near a fumarole at a volcano in Mexico. Reviewed

Johan F. De Jonckheere JF, Murase J, Opperdoes FR

  Vol. 50   page： 43-50   2011

Bacterial populations assimilating carbon from ¹³C-labeled plant residue in soil: analysis by a DNA-SIP approach. Reviewed

Lee CG, Watanabe T, Sato Y, Murase J, Asakawa S, Kimura M

  Vol. 43   page： 814-822   2011

Strain-specific incorporation of methanotrophic biomass into eukaryotic grazers in a rice field soil revealed by PLFA-SIP. Reviewed

FEMS Microbiology Ecology   Vol. 75   page： 284-290   2011

Unique viral capsid assembly protein gene (g20) of cyanophages in the floodwater of a Japanese paddy field. Reviewed

Wang GH, Murase J, Asakawa S, Kimura M

Biol. Fert. Soils   Vol. 46   page： 93-102   2010

Isolation of a new heterolobosean amoeba from a rice field soil: Vrihiamoeba italica gen. nov., sp. nov. Reviewed

Murase J, Kawasaki M, De Jonckheere JF

Eur. J. Protistol.   Vol. 46   page： 164-170   2010

Isolation of a new heterolobosean amoeba from a rice field soil: Vrihiamoeba italica gen. nov., sp. nov. Reviewed

Murase J, Kawasaki M, De Jonckheere JF

European Jouranal of Protistology   Vol. 46   page： 164-170   2010

Low diversity of T4-type bacteriophages in applied rice straw, plant residues and rice roots in Japanese rice soils: Estimation from major capsid gene (g23) composition. Reviewed

Fujihara S, Murase J, Tun CC, Matsuyama T, Ikenaga M, Asakawa S, Kimura M

Soil Science and Plant Nutrition   Vol. 56   page： 800-812   2010

Novel cyanophage photosynthetic gene psbA in the floodwater of a Japanese rice field. Reviewed

Wang GH, Murase J, Asakawa S, Kimura M

FEMS Microbiol. Ecol.   Vol. 70   page： 79-86   2009

Methanogenic archaeal communities developed in paddy fields in the Kojima Bay polder, estimated by denaturing gradient gel electrophoresis, real-time PCR and sequencing analyses. Reviewed

Watanabe, T., Cahyani, V.R., Murase, J., Ishibashi, E., Kimura, M., Asakawa, S.

Soil Sci. Plant Nutr.   Vol. 55   page： 73-79   2009

Phyologenetic positions of Mn-oxidizing bacteria and fungi inhabiting Mn nodules in rice field subsoils. Reviewed

Cahyani, V.R., Murase, J., Ikeda, A., Taki, K., Asakawa, S., Kimura,M

Biol. Fertil. Soils   Vol. 45   page： 337-346   2009

T4-type bacteriophage communities estimated from the major capsid genes (g23) in manganese nodules in Japanese paddy fields. Reviewed

Cahyani VR, Murase J, Ishibashi E, Asakawa S, Kimura M

Soil Sci. Plant Nutr.   Vol. 55   page： 468-477   2009

Changes in major capsid genes (g23) of T4-type bacteriophages with soil depth in two Japanese rice fields. Reviewed

Wang GH, Murase J, Taki K, Ohashi Y, Yoshikawa N, Asakawa S, Kimura M

Biol. Fert. Soils   Vol. 45   page： 521-529   2009

Eukaryotic communities associated with the decomposition of rice straw compost in a Japanese rice paddy field estimated by DGGE analysis Reviewed

HatamotoM., Tanahashi T., Murase J., Matsuya M., Hayashi M., Kimura M., Asakawa S.

Bio. Fert. Soils   Vol. 44 ( 3 ) page： 527-532   2008

*Selective grazing of methanotrophs by protozoa in a rice field soil. Reviewed

Murase,J. Frenzel,P.

FEMS Microbiol. Ecol.   Vol. 65   page： 408-414   2008

Phyologenetic positions of Mn-oxidizing bacteria and fungi inhabiting Mn nodules in rice field subsoils. Reviewed

Vita Ratri Cahyani, Jun Murase, Akihiro Ikeda, Katsutoshi Taki, Susumu Asakawa, and Makoto Kimura

Bio. Fert. Soils     page： 10.1007/s00374-008-0337-8.   2008

Bacterial communities in Fe mottles in the plow pan layer of a Japanese rice field: estimation using PCR-DGGE and sequencing analyses Reviewed

Vita Ratri Cahyani, Jun Murase, Eiji Ishibasi, Susumu Asakawa, and Makoto Kimura

Soil Sci. Plant Nutr.   Vol. 54 ( 4 ) page： doi: 10.1111/j.1747-0765.2008.00291.x   2008

*A methane-driven microbial food web in a wetland rice soil. Reviewed

Murase, J., Frenzel,P.

Environ. Microbiol.   Vol. 9 ( 12 ) page： 3025-3034   2007.12

*水田土壌の細菌群集の構造と機能に及ぼす原生動物の影響 Invited

村瀬　潤

土と微生物   Vol. 61   page： 65-68   2007

Bacterial communities in manganese nodules in rice field subsoils: estimation by PCR-DGGE and sequencing analyses. Reviewed

Cahyani, V.R., Murase,J., Ishibashi,E., Asakawa,S., Kimura,M.

Soil Sci. Plant Nutr.   Vol. 53   page： 578-584   2007

Impact of protists on the activity and structure of the bacterialcommunity in a rice field soil Reviewed

Murase, J., Noll, M., Frenzel,P.

Applied and Environmental Microbiology   Vol. 72 ( 8 ) page： 5436-5444   2006.8

土壌中の遺伝子・遺伝情報　何ができるのか、何が分かるのか９．土壌DNAの利用、新しい研究手法（その２）Stable Isotope Probing Invited Reviewed

村瀬　潤

日本土壌肥料学雑誌   Vol. 77 ( 2 ) page： 231-234   2006

*Incorporation of 13C-labeled rice straw carbon into microbial communities in submerged rice field soil and the percolating water. Reviewed

  Vol. 38   page： 3483-3491   2006

Vertical Changes in Bacterial communities in percolating water of a Japanese paddy field as revealed by PCR-DGGE. Reviewed

Murase,J., Shimizu,M., Hayashi,M., Matsuya,K., and Kimura,M.

Soil Sci. Plant Nutr.   Vol. 51   page： 821-829   2005

Carbon cycling in rice field ecosystems in the context of input, decomposition and translocation of organic materials and the fates of their end products (CO2 and CH4). Reviewed

Kimura,M., Murase,J., and Lu,Y.

Soil Biol. Biochem.   Vol. 36   page： 1399-1416   2005

Effect of rice straw amendment on dissolved organic and inorganic carbon, and cationic nutrients in percolating water from a flooded paddy soil: A microcosm experiment using 13C-enriched rice straw. Invited Reviewed

Katoh,M., Murase,J., Sugimoto,A., and Kimura,M.

Org. Geochem.   Vol. 36   page： 803-811   2005

Bacterial community responsible for the decomposition of rice straw compost in a Japanese rice paddy field estimated by DGGE analysis of amplified 16S rDNA and 16S rRNA fragments. Reviewed

Tanahashi,T., Murase,J., Matsuya,K., Asakawa, S., and Kimura,M.

Soil Sci. Plant Nutr., 51, 351-360 (2005)   Vol. 51   page： 351-360   2005

Dynamics of methane in a mesotrophic Lake Biwa, Japan. Invited Reviewed

Murase.J., Sakai,Y., Kametani,A., and Sugimoto,A.

Ecol. Res.   Vol. 20   page： 377-385   2005

Inhibitory effect of light on methane oxidation in the pelagic water column of a mesotrophic lake (Lake Biwa, Japan). Reviewed

Murase,J. and Sugimoto,A.

Limnol. Oceanogr.   Vol. 50   page： 1339-1343   2005

Microbial communities responsible for the decomposition of rice straw compost in a Japanese rice paddy field determined by phospholipid fatty acid (PLFA) analysis. Reviewed

Tanahashi,T., Murase,J., Matsuya,K., Asakawa,S., and Kimura,M.

Soil Sci. Plant Nutr., 50, 1229-1236 (2004)   Vol. 50   page： 1229-1236   2004

Sites and process of nutrient accumulation in the subsoil through water percolation from the plow layer in a submerged paddy soil microcosm. Reviewed

Katoh,M., Murase,J., and Kimura,M.

Soil Sci. Plant Nutr.   Vol. 50   page： 731-738   2004

Nutrient leaching from the plow layer by water percolation and accumulation in the subsoil in an irrigated paddy field. Reviewed

Katoh,M., Murase,J., Hayashi,M., Matsuya,K., and Kimura,M.

Soil Sci. Plant Nutr.   Vol. 50   page： 721-729   2004

Biotic and abiotic methane releases from Lake Biwa sediment slurry. Reviewed

Dan,J., Kumai,T., Sugimoto,A., and Murase,J.

Limnology   Vol. 5   page： 149-154   2004

Linking microbial community dynamics to rhizosphere carbon flow in a wetland rice soil. Reviewed

Lu,Y., Murase,J., Watanabe,A., Sugimoto,A., and Kimura,M.

FEMS Microbiol. Ecol.   Vol. 48   page： 179-186   2004

Analysis of communities of ammonia oxidizers, methanotrophs, and methanogens associated with microcrustaceans in the floodwater of a rice field microcosm. Reviewed

Niswati,A., Murase,J., Asakawa,S., and Kimura,M.

Soil Sci. Plant Nutr.   Vol. 50   page： 447-455   2004

Effect of application of rice straw and compost on the community structure of bacteria associated with microcrustaceans in the floodwater of a paddy field microcosm. Reviewed

Niswati,A., Murase,J., and Kimura,M.

Soil Sci. Plant Nutr.   Vol. 49   page： 191-200   2003

Adsorption as a methane storage process in natural lake sediment. Reviewed

Sugimoto,A., Dan,J., Kumai,T., and Murase,J.

Geophys. Res. Lett.   Vol. 30   page： doi:10.1029/2003GL018162   2003

Molecular analysis of β-proteobacterial ammonia oxidizer populations in surface layers of a submerged paddy soil microcosm. Reviewed

Murase,J., Itoh,K., Kano,M., and Kimura,M.

Soil Sci. Plant Nutr.   Vol. 49   page： 909-913   2003

Sources of dissolved methane in Lake Biwa. Reviewed

Murase,J., Sakai,Y., Sugimoto,A., Okubo,K., and Sakamoto,M.

Limnology   Vol. 4   page： 91-99   2003

第2編第2章2.2自然特性

村瀬潤

    2002.3

Resuspension of bottom sediment by an internal wave in Lake Biwa Reviewed

Sakai,Y., Murase,J., Sugimoto,A., Okubo,K., and Nakayama,E.

Lakes Reserv.   Vol. 7   page： 339-344   2002

Seasonal and spatial variations of methane production in mesotrophic lake sediments (Lake Biwa, Japan).

Murase,J. and Sugimoto,A.:

Verh.Int. Ver. Limnol.   Vol. 28   page： 971-974   2002

Comparison of microbial communities in percolating water from plow layer and subsoil layer estimated by phospholipid fatty acid (PLFA) analysis. Reviewed

Shimizu,M., Hayashi,M., Matsuya,K., Murase,J., and Kimura,M.

Soil Sci. Plant Nutr.   Vol. 48   page： 877-881   2002

Uptake of carbon and nitrogen through roots of rice and corn plants, grown in soils treated with 13C and 15N dual-labeled cattle manure compost. Reviewed

Yamamuro,S., Ueno,H., Yamada,H., Takahashi,Y., Shiga,Y., Miyahara,S., Shimonihara,T., Murase,J., Yanai,J., and Nishida,M.

Soil Sci. Plant Nutr.   Vol. 48   page： 787-795   2002

沿岸帯を観るキーワード　－その多面的多様性－ Invited Reviewed

村瀬　潤・野崎健太郎・山田佳裕

陸水学雑誌   Vol. 63   page： 269-270   2002

Spatial distribution of methane in the Lake Biwa sediments and its carbon isotopic compositions

Jun MURASE & Atsuko SUGIMOTO

Geochemical Journal   Vol. 35   page： 257-263   2001.8

Horizontal distribution of carbon and nitrogen and their isotopic compositions in the surface sediment of Lake Biwa

"Murase,J. and Sakamoto,M"

Limnology   Vol. 1   page： 177-184   2000.1

琵琶湖堆積物の生元素の空間的分布

村瀬潤

    1998.1

"Anaerobic reoxidation of Mn2+, Fe2+, S0 and S2- in submerged paddy soils."

"Murase,J. and Kimura,M.:"

Biol.Fert.Soil.   Vol. 25   page： 302-306   1997.1

Anaerobic reoxidation of Mn²⁺, Fe²⁺, S⁰ and S^2- in submerged poddy soils.

Biology Fertility Soil   Vol. 25   page： 302-306   1997

Methane production and its fate in paddy fields. IX. Methane flux distribution and decomposition of methane in the subsoil during the growth period of rice plants.

"Murase,J. and Kimura,M."

Soil Sci. Plant Nutr.   Vol. 42(1)   page： 187-190   1996.1

Utilization of the feces sludge from the swine farm for rice production in the problem soils in Thailand.

"Murase,J., Korpraditskul,R., Osotsapar,Y., and Korpraditskul,V"

J. ISSAAS   Vol. 2   page： 54-71   1996.1

Methane production and its fate in paddy fields. (]G0009[) Methane flux distribution and decompostition of methane in the subsoil during the growth period of rice plants

Soil Science and Plant Nutrition   Vol. 42 ( 1 ) page： 187-190   1996

Utilization of the faces sludge from the swine Farm for rice production in the problem soils in Thailand

Journal of International Society for Southeast Asian Agricultural Sciences(J. ISSAAS)   Vol. 2   page： 54-71   1996

Methane production and its fate in paddy fields. IV. Sources of microorganisms and substrates responsible for anaerobic methane oxidation in subsoil. Reviewed

Soil Science and Plant Nutrition   Vol. 40 ( 1 ) page： 57-61   1994

Methane production and its fate in paddy fields. (]G0006[) Anaerobic oxidation of methane in plow layer soil

Soil Science and Plant Nutrition   Vol. 40 ( 3 ) page： 505-514   1994

Methane production and Its fate in paddy fields. (]G0007[) Electron Acceptors responsible for anaerobic methane oxidation

Soil Science and Plant Nutrition   Vol. 40 ( 4 ) page： 647-654   1994

Methane production and its fate in paddy fields. (]G0003[). Effects of percolation on methane flux distribution to the atmosphere and the subsoil

Soil Science and Plant Nutrition   Vol. 39 ( 1 ) page： 63-70   1993

最新農業技術「土壌施肥 vol.9」

村瀬　潤（ Role： Sole author ,  太陽熱処理が土壌繊毛虫群集に及ぼす影響）

農文協  2017.3 

土のひみつ-食料・環境・生命-

日本土壌肥料学会「土のひみつ」編集グループ（編）（ Role： Joint author）

朝倉書店  2015.9 

4.1 微生物．身近な水の環境科学-実習・測定編-

日本陸水学会東海支部会（ Role： Joint author）

朝倉書店  2014.6 

第16章 Stable Isotope Probing、土壌微生物実験法第３版

日本土壌微生物学会　（編）（ Role： Sole author）

養賢堂  2013.6 

第10章 原生動物 (10-2～10-6節)、土壌微生物実験法第３版

日本土壌微生物学会　（編）（ Role： Sole author）

養賢堂  2013.6 

12. 窒素サイクル，メタンサイクルに果たす微生物の役割、 シリーズ　現代の生態学11巻

村瀬　潤（ Role： Sole author）

共立出版  2011.3 

７．水田の土壌環境と微生物相　　身近な自然の保全生態学

村瀬　潤,　浅川　晋（ Role： Joint author）

培風館  2010.10 

世紀を超えて座談会を傍聴する、日本微生物生態学会編、土壌微生物通信(1962-1986)探訪(2)　「通信」の時代と現在の間

村瀬　潤（ Role： Sole author）

博友社  2010.5 

7.集水域の中の水田、日本陸水学会東海支部会編、身近な水の環境科学－源流から干潟まで－

村瀬　潤（ Role： Sole author）

朝倉書店  2010.1  （ ISBN:978-4-254-18023-7 ）

*土壌の原生生物・線虫群集－その土壌生態系での役割－

橋本知義、村瀬　潤、島野智之、岡田浩明、豊田剛己、佐藤恵利華（ Role： Joint author）

博友社  2009.8 

Terrestrial ecosystems in a changing world.

Kohyama,T., Urabe,J., Hikosaka,K., Shibata,H., Yoshioka,T., Konohira,E., Murase,J., Wada,E.（ Role： Joint author）

Springer  2007 

地球環境と生態系 5.4 水系のガス代謝

村瀬　潤・杉本敦子（ Role： Joint author）

共立出版  2006.5 

東アジアモンスーン域の湖沼と流域　3-4湖の富栄養化の現状、変動経過、原因

坂本　充・村瀬　潤・丸尾雅啓（ Role： Joint author）

名古屋大学出版会  2006 

新・土の微生物 (5)系統分類からみた土の細菌

村瀬潤（ 編：日本土壌微生物学会編）（ Role： Joint author）

博友社  2000 

Microeukaryotic community in the upland soil under the long-term fertilizer treatments.

Sok, S., and Murase, J.

日本土壌肥料学会2020年度倉敷大会  2020.9  日本土壌肥料学会

温度は細菌を捕食する土壌原生生物の群集構成を支配する International coauthorship

大島崇彰, Gillar, O., 村瀬潤

日本土壌肥料学会中部支部2019年名古屋大会  2019.11.27  日本土壌肥料学会中部支部

土壌に導入された微生物を利用する微生物群集のStable Isotope Probing法による解析 International coauthorship

南川浩樹, 大島崇彰, Gillar, O., 村瀬潤

日本土壌肥料学会2019年度静岡大会  2019.9.3  日本土壌肥料学会

水稲根圏の細菌群集に及ぼす原生生物の影響

永井裕也、村瀬　潤

日本土壌微生物学会2019年度大会  2019.6.15  日本土壌微生物学会

田んぼの中の原生生物たちの暮らし Invited

村瀬　潤

日本土壌微生物学会2019年度大会  2019.6.16  日本土壌微生物学会

湛水水田土壌表層における溶存酸素鉛直プロファイルの昼夜変動

村瀬潤, 後藤佳介, 杉浦大輔

日本土壌肥料学会中部支部2018年度大会  2018.11.29  日本土壌肥料学会中部支部

土壌繊毛虫群集に及ぼす温度環境の影響－高温に対する脆弱性と復元力

大島崇彰、篠原陽子、村瀬　潤

日本土壌肥料学会2018年度神奈川大会  2018.8.29  日本土壌肥料学会

The effect of humic substances on the methanogenic microbial community in the artificial rice field soil International conference

Maeda, Y., and Murase, J.

17th International Symposium on Microbial Ecology  2018.8  International Society of Microbial Ecology

Microflora in Arctic Wetland Soils of a Taiga-Tundra Ecotone in Northeastern Siberia International coauthorship International conference

Murase, J., Sugimoto, A., Shingubara, R., and Maximov, T. C.

The 10th Asian Symposium in Microbial Ecology  2018.7 

長期施肥試験圃場で生育する作物の根圏微生物群集－発病抑止性との関連－

村瀬　潤、田原保樹、日置真優、西内俊策、北野英己、柘植尚志

日本土壌微生物学会2018年度大会  2018.6.16  日本土壌微生物学会

Ecology of protists in a rice rhizosphere Invited International conference

International Workshop of Mollisols Ecology  2018.6.8  Chinese Academy of Science

Methane-driven microbial food web in the rice rhizosphere International conference

Hibino, Y., Tokida, T., Okubo, T., Arai, M., Hayashi, K., Sakai, H., Hasegawa, T., and Murase, J.

13 th International Conference of The East and Southeast Asia Federation Of Soil Sciences (13 th ESAFS)  2017.12  East and Southeast Asia Federation Of Soil Sciences

水稲根圏における原生生物の生態と機能 Invited

村瀬　潤

第362回生存権シンポジウム  2017.11.21  京都大学

北東シベリア湿地土壌のメタン酸化のポテンシャルと微生物叢の特性 International coauthorship

村瀬潤, 杉本敦子, 新宮原諒, マキシモフ・トロフィーム・C

日本土壌肥料学会中部支部2017年度大会  2017.10.26  日本土壌肥料学会中部支部

水稲根圏におけるメタン酸化食物連鎖の安定同位体プロービング法による解析

日比野優子, 常田岳志, 大久保卓, 荒井美和, 林健太郎, 酒井英光, 長谷川利拡, 村瀬潤

日本土壌肥料学会2017年度仙台大会  2017.9  日本土壌肥料学会

⽔⽥⼟壌のメタン酸化微⽣物⾷物連鎖の構造と機能 International conference

村瀬潤, 日比野優子, 常田岳志, 大久保卓, 荒井美和, 林健太郎, 酒井英光, 長谷川利拡

日本地球惑星科学連合2017年大会  2017.5.24  日本地球惑星科学連合

人工水田土壌のメタン生成活性と微生物群集に及ぼす土壌構成要素の影響

村瀬潤, 前田悠

日本微生物生態学会第31回大会  2016.10  日本微生物生態学会

Diversity and ecology of microeukaryotes in rice field soil Invited International conference

The 8th Asian Symposium on Microbial Ecology  2016.10.1  Taiwan Society of Microbial Ecology

北東シベリア湿地土壌のメタン酸化ポテンシャル International coauthorship

村瀬潤, 杉本敦子, 新宮原諒, マキシモフ・トロフィーム・C

日本土壌肥料学会2016年度佐賀大会  2016.9.20  日本土壌肥料学会

Response of the protistan community of a rice field soil to different oxygen tensions. International conference

16th International Symposium on Microbial Ecology  2016.8  International Society of Microbial Ecology

太陽熱土壌消毒が土壌微生物群集に及ぼす影響のeDNA解析による評価

大島崇彰, 篠原陽子, 山野明日夏, 前坂昌宏, 横江和典, 山縣美奈, 橋本知義, 村瀬潤, 浅川晋

日本土壌微生物学会2016年度大会  2016.6.11  日本土壌微生物学会

有機物資材の長期施用が畑土壌の病害抑止性と微生物群集に及ぼす影響

村瀬潤, 田原保樹, 日置真優, 西内俊策, 北野英己, 柘植尚志

日本土壌微生物学会2016年度大会  2016.6.11  日本土壌微生物学会

Methane Oxidation Potential of Arctic Wetland Soil of a Taiga-Tundra Ecotone in Northeastern Siberia International coauthorship International conference

2016.5.26 

水田土壌微生物の態解析を目指した人工開発 —腐植物質が微生群集およびその活性に及ぼす影響 —

前田悠, 村瀬潤

日本土壌肥料学会中部支部第95回例会  2016.3.3  日本土壌肥料学会中部支部

水田土壌微生物の生態解析を目指した人工土壌の開発

前田悠, 村瀬潤

第31回日本腐植物質学会  2015.11.20  日本腐植物質学会

Methane oxidation potential of arctic wetland soil of a Taiga-Tundra ecotone in Northeastern Siberia. International coauthorship International conference

Murase, J., Sugimoto, A., Shingubara, R., and Maximov, T. C

The 7th Japan-Taiwan-Korea International Symposium on Microbial Ecology  2015.10.18 

Methane-driven microbial food web in a rice field soil Invited International conference

International Synposiumm "From classic to Frontiers: Methanotrophy and Meta-omics”  2015.9.21  Chinese Academy of Science

Diversity and Ecology of Microeukaryotic Community in a Paddy Soil International conference

12th International Conference of the East and Southeast Asia Federation of Soil Science Societies (ESAFS2015)  2015.9.18  East and Southeast Asia Federation of Soil Science Societies

異なる有機物資材の長期施用が畑土壌の細菌群集に及ぼす影響

村瀬潤, 田原保樹, 日置真優, 西内俊策, 北野英己, 柘植尚志

日本土壌肥料学会2015年京都大会  2015.9  日本土壌肥料学会

Methane Oxidation Potential of Arctic Wetland Soil of a Taiga-Tundra Ecotone in Northeastern Siberia International coauthorship International conference

2015.5.26 

Assimilation of Plant-derived Carbon by Microeukaryotes in a Rice Field Soil International conference

Murase, J., Lee, C. G., Li, Y., Shibata, M., Nakatani, H., Minami, H., Watanabe, T., Asakawa, S., and Kimura, M.

15th International Symposium on Microbial Ecology  2018.8  International Society of Microbial Ecology

Assimilation of Plant-derived Carbon by Microeukayotes in Rice Field Soil Revealed Using Stable-Isotope Probing. International conference

Murase, J., Lee, C. G., Li, Y., Shibata, M., Nakatani, H., Minami, H., Watanabe, T., Asakawa, S., and Kimura, M.

5th TKJ International Symposium in Microbial Ecology  2013.11.1  Taiwan Society of Microbial Ecology

長期の施肥管理が水田土壌の繊毛虫群集に及ぼす影響

村瀬潤, 松田梨里, 飛田あづさ, 小川佳織, 今井克彦, 吉川那々子, 野々山利博, 木村眞人

日本土壌肥料学会2013年度名古屋大会  2013.9  日本土壌肥料学会

PLFA-SIP法を用いた水田土壌の原生動物によるメタン酸化細菌の捕食解析

村瀬　潤、Paul Bodelier

日本土壌微生物学会 

微生物食物連鎖の分子生物学的解析：メタン酸化を例として

日本生態学会 

水田土壌から分離された新奇Heteroloboseaアメーバの形態学的・分子系統学的解析

村瀬　潤、Johan F. De Jonckheere

日本陸水学会東海支部会 

原生動物の捕食作用が水田土壌のメタン酸化細菌群集に及ぼす影響

村瀬　潤、Peter Frenzel

日本微生物生態学会 

有機物施用および酸素の有無が水田土壌の真核微生物群集に及ぼす影響

岩崎和史・村瀬　潤・木村眞人

日本土壌肥料学会 

Impact of protozoan grazing on the community of methanotrophic bacteria in a wetland rice field soil International conference

the10th InternationalSymposium on Bacterial Genetics and Ecology 

水田土壌のメタン酸化細菌群集におよぼす原生動物の影響

村瀬　潤・Peter Frenzel

日本土壌微生物学会 

水田土壌の原生動物によるメタン酸化細菌の選択的捕食

村瀬　潤、Paul L.E. Bodelier

日本陸水学会東海支部会 

水田土壌生態系の機能における細菌-原生生物系の役割

日本土壌肥料学会2008年度大会 

Selective grazing of free-living naked amoeba on methane-oxidizing bacteria. (Wako, Japan) 9 2007.8-27-30 International conference

XIIth International Meeting on the Biology and Pathogenicity of Free-Living Amoebae 

水田土壌から単離したアメーバの系統解析

村瀬　潤・Peter Frenzel

日本土壌肥料学会2007年度大会 

メタン酸化細菌に対する原生動物の捕食選択性

村瀬　潤・Peter Frenzel

日本土壌微生物学会2007年度大会 

The Methanotrophic Microbial Food Chain in a Rice Field Soil International conference

The 10th International Symposium on Wetland Biogeochemistry 

水田土壌の物質循環と原生動物の機能

村瀬　潤

2006年度・日本微生物生態学会　学際シンポジュウム　－土壌における原生生物の多様性と微生物との相互作用－ 

原生動物が水田土壌の物質循環に及ぼす影響

村瀬　潤・Peter Frenzel・Matthias Noll

日本土壌肥料学会2006年度秋田大会 

水田土壌の原生生物群集に及ぼすメタンの影響

村瀬　潤・Peter Frenzel

土壌微生物学会 

A microbial food web in a rice field soil driven by methane oxidation. International conference

11th International Symposium on Microbial Ecology 

The impact of protists on activity and structure of bacterial community in a flooded rice field soil. International conference

ASLO Summer Meeting 

Methane dynamics in Lake Biwa. International conference

The Goldschmidt Conference 2003 

Carbon dynamics in bottom sediment of Lake Biwa, Japan: origins, metabolism, and impact on the lake ecosystem. International conference

The International Symposium on Response of Terrestrial Watershed Ecosystems in Monsoon Asia to Global Change (Kyoto, Japan) 

Chemical determination of microbially reducible manganese and iron in paddy soils and lake sediments. International conference

17th World Congress of Soil Science 

遺伝型・表現型が支配する水稲根圏の微生物食物連鎖構造と機能

Grant number：20H02887  2020.4 - 2023.3

科学研究費助成事業  基盤研究(B)

村瀬 潤, 中園 幹生, 土井 一行, 西内 俊策

田畑輪換圃場の微生物群集動態を長期継続調査し水田土壌微生物群集の安定性を解明する

Grant number：18H02114  2018.4 - 2023.3

科学研究費助成事業  基盤研究(B)

浅川 晋, 村瀬 潤, 渡邉 健史

Development of integrated soil management technology towards rehabilitation of degraded soils in the Tropics

Grant number：18H02315  2018.4 - 2022.3

Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (B)

Submillimeter-scale visualization of rhizosphere effect using Cryo-TOF-SIMS/SEM

Grant number：16K15075  2016.4 - 2020.3

Murase Jun

Effects of fluctuation of redox potentials on microbial dynamics and gas metabolisms of wetland soils

Grant number：16H05056  2016.4 - 2019.3

Murase Jun

Response of gas metabolism and microbial community in soil in the permafrost zone of northeastern Siberia to the environmental change

Grant number：16H05618  2016.4 - 2019.3

Murase Jun

Elucidating the cause of strange odor production in Lake Ogawarako

Grant number：15K07532  2015.4 - 2018.3

Maie Nagamitsu

土壌生態系の解剖学的解析ツールとしての人工土壌の開発

2013.4 - 2016.3

科学研究費補助金 

水稲根圏におけるメタンの動態に関わる微生物食物連鎖の構造と機能の解析

2013.4 - 2016.3

科学研究費補助金  基盤研究(B)

メタン酸化をめぐる微生物食物連鎖の機能解析　　　　　　　　　　　　　　　　　　　

2008

科学研究費補助金  基盤研究(C)，課題番号：20580061

村瀬　潤

Diversity and function of protists in wetland soils

2003.10 - 2008.3

Grant-in-Aid for Scientific Research 

微生物還元性鉄・マンガンの化学的定量法の確立と環境動態解析への応用

2001.7 - 2003.1

科学研究費補助金  奨励研究(A)

湖沼におけるガス交換

1999.7 - 2002.1

科学研究費補助金  特定領域研究(B)(2)(計画)

21世紀の環境構造変化に対応できる「琵琶湖標準モデル」の開発

1998.7 - 2000.1

科学研究費補助金  基盤研究(A)(2)(一般)