Updated on 2021/07/22

写真a

 
NAKAZONO, Mikio
 
Organization
Graduate School of Bioagricultural Sciences Professor
Graduate School of Bioagricultural Sciences
School of Agricultural Sciences
Title
Professor
Contact information
メールアドレス

Degree 1

  1. PhD (Agriculture) ( 1995.3   The University of Tokyo ) 

Research Interests 3

  1. Plant Molecular Genetics

  2. Plant Molecular Biology

  3. Plant Physiology

Research Areas 3

  1. Environmental Science/Agriculture Science / Science in plant genetics and breeding  / Plant Genetics and Breeding

  2. Life Science / Plant molecular biology and physiology  / Plant Molecular Biology

  3. Life Science / Plant molecular biology and physiology  / Plant Physiology

Current Research Project and SDGs 4

  1. Understanding molecular mechanisms of response and adaptation to submergence and waterlogging stresses in gramineous crops

  2. Understanding molecular mechanisms of response and adaptation to waterlogging stresses in soybean

  3. Anatomical analysis of the tissue structure that contributes to yield improvement in tomatoes

  4. Mechanism of excess iron tolerance in rice for stable production in acidic soil with excess iron

Research History 8

  1. The University of Western Australia   Faculty of Science School of Agriculture and Environment Adjunct Professor

    2016.10 - 2022.7

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    Country:Australia

  2. Nagoya University   Bioscience and Biotechnology Center Director

    2015.4 - 2023.3

  3. Nagoya University   Graduate School of Bioagricultural Sciences Professor

    2010.4

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    Country:Japan

  4. The University of Tokyo   Graduate School of Agricultural and Life Sciences Associate Professor

    2007.4 - 2010.3

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    Country:Japan

  5. The University of Tokyo   Graduate School of Agricultural and Life Sciences Associate Professor

    2003.3 - 2007.3

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    Country:Japan

  6. Iowa State University   Department of Agronomy Visiting Scientist

    2001.5 - 2002.5

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    Country:United States

  7. The University of Tokyo   Graduate School of Agricultural and Life Sciences Assistant Professor

    1996.4 - 2003.2

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    Country:Japan

  8. The University of Tokyo   Faculty of Agriculture Assistant Professor

    1995.12 - 1996.3

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    Country:Japan

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Education 4

  1. The University of Tokyo   Graduate School of Agricultural Science   Doctor Course (PhD program)

    1993.4 - 1995.3

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    Country: Japan

  2. Nagoya University   Graduate School of Agricultural Science   Doctor Course (PhD program)

    1992.4 - 1993.3

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    Country: Japan

  3. Nagoya University   Graduate School of Agricultural Science   Master course

    1990.4 - 1992.3

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    Country: Japan

  4. Nagoya University   Faculty of Agriculture   Department of Agricultural Chemistry

    1986.4 - 1990.3

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    Country: Japan

Professional Memberships 5

  1. Japanese Society of Breeding   Secretary-general

    2020.4 - 2022.3

  2. Japanese Society of Breeding   General affairs

    2008.4 - 2010.3

  3. Japanese Society of Breeding   General affairs

    2006.4 - 2008.3

  4. Japanese Society of Plant Physiologists

  5. International Society for Plant Anaerobiosis

 

Papers 135

  1. Expression analysis of genes for cytochrome P450 CYP86 and glycerol-3-phosphate acyltransferase related to suberin biosynthesis in rice roots under stagnant deoxygenated conditions. Reviewed International journal

    Nishiuchi, S., Watanabe, K., Sato, S., Takahashi, H. and Nakazono, M.

    Plant Root   Vol. 15   page: 19 - 35   2021.6

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    Authorship:Last author, Corresponding author   Publishing type:Research paper (scientific journal)  

    DOI: 10.3117/plantroot.15.19

  2. Key root traits of Poaceae for adaptation to soil water gradients. Reviewed International coauthorship International journal

    Yamauchi, T., Pedersen, O., Nakazono, M. and Tsutsumi, N.

    New Phytologist   Vol. 229   page: 3133 - 3140   2021.3

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/nph.17093

    PubMed

  3. Genetic regulation of root traits for soil flooding tolerance in genus Zea. Invited Reviewed International journal

    Mano, Y. and Nakazono, M.

    Breeding Science   Vol. 71   page: 30 - 39   2021.3

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    Authorship:Last author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1270/jsbbs.20117

  4. Dissection of root behavior to abiotic stimuli for breeding of climate-resilient crops International journal

    Uga, Y. and Nakazono, M.

    Breeding Science   Vol. 71 ( 1 ) page: 1 - 1   2021.3

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  5. Lateral roots, in addition to the adventitious roots, form a barrier to radial oxygen loss in Zea nicaraguensis and a chromosome segment introgression line in maize. Reviewed International coauthorship International journal

    Pedersen, O., Nakayama, Y., Yasue, H., Kurokawa, Y., Takahashi, H., Floytrup, A.H., Omori, F., Mano, Y., Colmer, T.D. and Nakazono, M.

    New Phytologist   Vol. 229   page: 94-105   2021.1

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    Authorship:Last author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/nph.16452

    PubMed

  6. Regulation of root adaptive anatomical and morphological traits during low soil oxygen. Invited Reviewed International coauthorship International journal

    Pedersen, O., Sauter, M., Colmer, T.D. and Nakazono, M.

    New Phytologist   Vol. 229   page: 42-49   2021.1

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    Authorship:Last author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/nph.16375

    PubMed

  7. Formation of a barrier to radial oxygen loss in L-type lateral roots of rice. Reviewed International journal

    Noorrohmah, S., Takahashi, H. and Nakazono, M.

    Plant Root   Vol. 14   page: 33-41   2020.12

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    Authorship:Last author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.3117/plantroot.14.33

  8. Distance-to-time conversion using Gompertz model reveals age-dependent aerenchyma formation in rice roots. Reviewed International coauthorship International journal

    Yamauchi, T., Nakazono, M., Inukai, Y. and Tsutsumi N.

    Plant Physiology   Vol. 183   page: 1424-1427   2020.8

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1104/pp.20.00321

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  9. Differences in xylem development between Dutch and Japanese tomato (Solanum lycopersicum) correlate with cytokinin levels in hypocotyls. Reviewed International coauthorship International journal

    Qi, X., Takahashi, H., Kawasaki, Y., Ohta, Y., Isozaki, M., Kojima, M., Takebayashi, Y., Sakakibara, H., Imanishi, S., Chen, X. and Nakazono, M.

    Annals of Botany   Vol. 126   page: 315-322   2020.8

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    Authorship:Last author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/aob/mcaa094

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  10. A role for auxin in ethylene-dependent inducible aerenchyma formation in rice roots. Reviewed International journal

    Yamauchi, T., Tanaka, A., Tsutsumi, N., Inukai, Y. and Nakazono, M.

    Plants   Vol. 9 ( 5 ) page: e610   2020.5

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    Authorship:Last author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.3390/plants9050610

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  11. QTLs for constitutive aerenchyma from Zea nicaraguensis improve tolerance of maize to root-zone oxygen deficiency. Reviewed International coauthorship International journal

    Gong, F., Takahashi, H., Omori, F., Wang, W., Mano, Y. and Nakazono, M.

    Journal of Experimental Botany   Vol. 70   page: 6475-6487   2019.11

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    Authorship:Last author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/jxb/erz403

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  12. Fine control of aerenchyma and lateral root development through AUX/IAA and ARF-dependent auxin signaling. Reviewed International journal

    Yamauchi, T., Tanaka, A., Inahashi, H., Nishizawa, N.K., Tsutsumi, N., Inukai, Y. and Nakazono, M.

    Proceedings of the National Academy of Sciences of the United States of America   Vol. 116 ( 41 ) page: 20770-20775   2019.10

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    DOI: 10.1073/pnas.1907181116

    PubMed

  13. Genetic and tissue-specific RNA-sequencing analysis of self-compatible mutant TSC28 in Brassica rapa L. toward identification of a novel self-incompatibility factor. Reviewed International journal

    Osaka M, Nabemoto M, Maeda S, Sakazono S, Masuko-Suzuki H, Ito K, Takada Y, Kobayashi I, Lim YP, Nakazono M, Fujii S, Murase K, Takayama S, Suzuki G, Suwabe K and Watanabe M

    Genes & Genetic Systems   Vol. 94   page: 167-176   2019.8

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1266/ggs.19-00010

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  14. Specification of the basal region identity after asymmetric zygotic division requires mitogen-activated protein kinase 6 in rice. Reviewed International journal

    Ishimoto, K., Sonohara, S., Kaboshi-Kishi, M., Itoh, J., Hibara, K., Sato, Y., Watanabe, T., Abe, K., Miyao, A., Nosaka-Takahashi, M., Suzuki, T., Ta, N.K., Shimizu-Sato, S., Suzuki, T., Toyoda, A., Takahashi, H., Nakazono, M., Nagato, Y., Hirochika, H. and Sato, Y.

    Development   Vol. 146   page: dev176305   2019.6

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1242/dev.176305

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  15. Rice acclimation to soil flooding: low concentrations of organic acids can trigger a barrier to radial oxygen loss in roots. Reviewed International coauthorship International journal

    Colmer, T.D., Kotula, L., Malik, A.I., Takahashi, H., Konnerup, D., Nakazono, M. and Pedersen, O.

    Plant, Cell & Environment   Vol. 42   page: 2183-2197   2019.4

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/pce.13562

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  16. Laser microdissection-based tissue specific transcriptome analyses reveals novel regulatory network of genes involved in heat-induced grain chalk in rice endosperm. Reviewed International coauthorship International journal

    Ishimaru, T., Parween, S., Saito, Y., Shigemitsu, T., Yamakawa, H., Nakazono, M., Masumura, T., Nishizawa, N.K., Kondo, M. and Sreenivasulu, N.

    Plant and Cell Physiology   Vol. 60   page: 626-642   2019.3

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pcy233

  17. Root cortex provides a venue for gas-space formation and is essential for plant adaptation to waterlogging. Reviewed International journal

    Yamauchi, T., Abe, F., Tsutsumi, N. and Nakazono, M.

    Frontiers in Plant Science   Vol. 10   page: e259   2019.3

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    Authorship:Last author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.3389/fpls.2019.00259

  18. Sucrose supply from leaves is required for aerenchymatous phellem formation in hypocotyl of soybean under waterlogged conditions. Reviewed International coauthorship International journal

    Takahashi, H., Qi, X., Shimamura, S., Yanagawa, A., Hiraga, S. and Nakazono, M.

    Annals of Botany   Vol. 121   page: 723-731   2018.3

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    DOI: 10.1093/aob/mcx205

  19. Regulation of root traits for internal aeration and tolerance to soil waterlogging-flooding stress. Reviewed International coauthorship International journal

    Yamauchi, T., Colmer, T.D., Pedersen, O. and Nakazono, M.

    Plant Physiology   Vol. 176   page: 1118-1130   2018.2

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    Authorship:Last author, Corresponding author   Language:English  

    DOI: 10.1104/pp.17.01157

  20. A major locus involved in the formation of the radial oxygen loss barrier in adventitious roots of teosinte Zea nicaraguensis is located on the short-arm of chromosome 3. Reviewed International coauthorship International journal

    Watanabe, K., Takahashi, H., Sato, S., Nishiuchi, S., Omori, F., Malik, A.I., Colmer, T.D., Mano, Y. and Nakazono, M.

    Plant, Cell & Environment   Vol. 40   page: 304-316   2017

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    DOI: 10.1111/pce.12849

  21. Molecular bases for phyllomorph development in a one-leaf plant, Monophyllaea glabra (Gesneriaceae). Reviewed International journal

    Ishikawa, N., Takahashi, H., Nakazono, M. and Tsukaya, H.

    American Journal of Botany   Vol. 104   page: 233-240   2017

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.3732/ajb.1600303

  22. An NADPH oxidase RBOH functions in rice roots during lysigenous aerenchyma formation under oxygen-deficient conditions. Reviewed International journal

    Yamauchi, T., Yoshioka, M., Fukazawa, A., Mori, H., Nishizawa, N.K., Tsutsumi, N., Yoshioka, H. and Nakazono, M.

    Plant Cell   Vol. 29   page: 775-790   2017

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    Authorship:Last author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1105/tpc.16.00976

  23. Community recommendations on terminology and procedures used in flooding and low oxygen stress research Reviewed International journal

    Sasidharan, R., Bailey-Serres, J., Ashikari, M., Atwell, B., Colmer, T.D., Fagerstedt, K., Fukao, T., Geigenberger, P., Hebelstrup, K., Hill, R.D., Holdsworth, M.J., Ismail, A.M., Licausi, F., Mustroph, A., Nakazono, M., Pedersen, O., Perata, P., Sauter, M., Shih, M.-C., Sorrell, B., Striker, G.G., van Dongen, J.T., Whelan, J., Xiao, S., Visser, E.J.W. and Voesenek, L.A.C.J.

    New Phytologist   Vol. 214   page: 1403-1407   2017

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/nph.14519

  24. Anatomical and biochemical characterisation of a barrier to radial O2 loss in adventitious roots of two contrasting Hordeum marinum accessions. Reviewed International coauthorship International journal

    Kotula, L., Schreiber, L., Colmer, T.D. and Nakazono, M.

    Functional Plant Biology   Vol. 44   page: 845-857   2017

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    Authorship:Last author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1071/FP16327

  25. METALLOTHIONEIN genes encoding ROS scavenging enzymes are down-regulated in the root cortex during inducible aerenchyma formation in rice. Reviewed International journal

    Yamauchi, T., Fukazawa, A. and Nakazono, M.

    Plant Signaling & Behavior   Vol. 12   page: e1388976   2017

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    DOI: 10.1080/15592324.2017.1388976

  26. Rice stomatal closure requires guard cell plasma membrane ATP-binding cassette transporter RCN1/OsABCG5. Reviewed International journal

    Matsuda, S., Takano, S., Nagasawa. H., Yoshikawa, S., Tokuji, Y., Yazaki, K., Nakazono, M., Takamure, I. and Kato, K.

    Molecular Plant   Vol. 9   page: 417-427   2016

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.molp.2015.12.007

  27. Ethylene-dependent aerenchyma formation in adventitious roots is regulated differently in rice and maize. Reviewed International journal

    Yamauchi, T., Tanaka, A., Mori, H., Takamure, I., Kato, K. and Nakazono, M.

    Plant, Cell & Environment   Vol. 39   page: 2145-2157   2016

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    DOI: 10.1111/pce.12766

  28. Transcriptional regulatory mechanism of alcohol dehydrogenase 1-deficient mutant of rice for the cell survival under complete submergence. Reviewed International coauthorship International journal

    Mohanty, B., Takahashi, H., de los Reyes, B.G., Wijaya, E., Nakazono, M. and Lee, D.Y.

    Rice   Vol. 9   page: e51   2016

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1186/s12284-016-0124-3

  29. Transcripts of two ent-copalyl diphosphate synthase genes differentially localize in rice plants according to their distinct biological roles. Reviewed International journal

    Toyomasu, T., Usui, M., Sugawara, C., Kanno, Y., Sakai, A., Takahashi, H., Nakazono, M., Kuroda, M., Miyamoto, K., Morimoto, Y., Mitsuhashi, W., Okada, K., Yamaguchi, S. and Yamane, H.

    Journal of Experimental Botany   Vol. 66   page: 369–376   2015

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/jxb/eru424

  30. Transcriptional characteristics and differences in Arabidopsis stigmatic papilla cells pre- and post-pollination. Reviewed International journal

    Matsuda, T., Matsushima, M., Nabemoto, M., Osaka, M., Sakazono, S., Masuko-Suzuki, H., Takahashi, H., Nakazono, M., Iwano, M., Takayama, S., Shimizu, K.K., Okumura, K., Suzuki, G., Watanabe, M. and Suwabe, K.

    Plant and Cell Physiology   Vol. 56   page: 663-673   2015

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pcu209

  31. The rice RCN11 gene encodes β1,2-xylosyltransferase and is required for plant responses to abiotic stresses and phytohormones. Reviewed International journal

    Takano, S., Matsuda, S., Funabiki, A., Furukawa, J., Yamauchi, T., Tokuji, Y., Nakazono, M., Shinohara, Y., Takamure, I. and Kato, K.

    Plant Science   Vol. 236   page: 75-88   2015

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.plantsci.2015.03.022

  32. Transcript profiles in cortical cells of maize primary root during ethylene-induced lysigenous aerenchyma formation under aerobic conditions. Reviewed International journal

    Takahashi, H., Yamauchi, T., Rajhi, I., Nishizawa, N.K. and Nakazono, M.

    Annals of Botany   Vol. 115   page: 879-894   2015

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    Authorship:Last author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/aob/mcv018

  33. Ethylene biosynthesis is promoted by very-long-chain fatty acids during lysigenous aerenchyma formation in rice roots. Reviewed International journal

    Yamauchi, T., Shiono, K., Nagano, M., Fukazawa, A., Ando, M., Takamure, I., Mori, H., Nishizawa, N.K., Kawai-Yamada, M., Tsutsumi, N., Kato, K. and Nakazono, M.

    Plant Physiology   Vol. 169   page: 180-193   2015

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    Authorship:Last author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1104/pp.15.00106

  34. Laser microdissection-based gene expression analysis in the aleurone layer and starchy endosperm of developing rice caryopses in the early storage phase. Reviewed International journal

    Ishimaru, T. Ida, M., Hirose, S., Shimamura, S., Masumura, T., Nishizawa, N.K., Nakazono, M. and Kondo, M.

    Rice   Vol. 8   page: e22   2015

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1186/s12284-015-0057-2

  35. Molecular cloning and expression analysis of the WEE1 and CCS52A genes in European pear (Pyrus communis L.) and their possible roles in a giant fruit mutant. Reviewed International journal

    Hanada, T., Nashima, K., Kato, M., Takashina, T., Ikeda, K., Sakamoto, Y., Takahashi, H., Nakazono, M., Oikawa, A., Shiratake, K. and Isuzugawa, K.

    Journal of Horticultural Science & Biotechnology   Vol. 90   page: 511-517   2015

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1080/14620316.2015.11668707

  36. Rice alcohol dehydrogenase 1 promotes survival and has a major impact on carbohydrate metabolism in the embryo and endosperm when seeds are germinated in partially oxygenated water. Reviewed International coauthorship International journal

    Takahashi, H., Greenway, H., Matsumura, H., Tsutsumi N. and Nakazono, M.

    Annals of Botany   Vol. 113   page: 851-859   2014

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    DOI: 10.1093/aob/mct305

  37. Strigolactone and cytokinin act antagonistically in regulating rice mesocotyl elongation in darkness. Reviewed International journal

    Hu, Z., Yamauchi, T., Yang, J., Jikumaru, Y., Tsuchida-Mayama, T., Ichikawa, H., Takamure, I., Nagamura, Y., Tsutsumi, N., Yamaguchi, S., Kyozuka J. and Nakazono M.

    Plant and Cell Physiology   Vol. 55   page: 30-41   2014

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    Authorship:Last author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pct150

  38. Effects of organic acids on formation of the barrier to radial oxygen loss in roots of Hordeum marinum. Reviewed International coauthorship International journal

    Kotula, L., Colmer, T.D. and Nakazono, M.

    Functional Plant Biology   Vol. 41   page: 187-202   2014

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    Authorship:Last author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1071/FP13178

  39. Ethylene and reactive oxygen species are involved in root aerenchyma formation and adaptation of wheat seedlings to oxygen-deficient conditions. Reviewed International journal

    Yamauchi, T., Watanabe, K., Fukazawa, A., Mori, H., Abe, F., Kawaguchi, K., Oyanagi, A. and Nakazono, M.

    Journal of Experimental Botany   Vol. 65   page: 261-273   2014

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    Authorship:Last author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/jxb/ert371

  40. Spatial transcriptomes of iron-deficient and cadmium-stressed rice. Reviewed International journal

    Ogo, Y., Kakei, Y., Nakanishi-Itai, R., Kobayashi, T., Nakanishi, H., Takahashi, H., Nakazono, M and Nishizawa, N.K.

    New Phytologist   Vol. 201   page: 781-794   2014

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/nph.12577

  41. Biochemical and molecular characterization of rice (Oryza sativa L.) roots forming a barrier to radial oxygen loss. Invited Reviewed International journal

    Kulichikhin, K., Yamauchi, T., Watanabe, K. and Nakazono, M.

    Plant, Cell & Environment,   Vol. 37   page: 2406-2420   2014

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    Authorship:Last author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/pce.12294

  42. Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Reviewed International coauthorship International journal

    Shiono, K., Yamauchi, T, Yamazaki, S., Mohanty, B., Malik, A.I., Nagamura, Y., Nishizawa, N.K., Tsutsumi, N., Colmer, T.D. and Nakazono, M.

    Journal of Experimental Botany   Vol. 65   page: 4795-4806   2014

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    Authorship:Last author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/jxb/eru235

  43. RCN1/OsABCG5, an ATP-binding cassette (ABC) transporter, is required for hypodermal suberization of roots in rice (Oryza sativa). Reviewed International journal

    Shiono, K., Ando, M., Nishiuchi, S., Takahashi, H., Watanabe, K., Nakamura, M., Matsuo, Y., Yasuno, N., Yamanouchi, U., Fujimoto, M., Takanashi, H., Ranathunge, K., Franke, R., Shitan, N., Nishizawa, N.K., Takamure, I., Yano, M., Tsutsumi, N., Schreiber, L., Yazaki, K., Nakazono, M. and Kato, K.

    Plant Journal   Vol. 80   page: 40-51   2014

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/tpj.12614

  44. Transcriptome analysis of flower receptacle of the European pear (Pyrus communis L.) `La France' and its giant fruit sport using next-generation sequencing technology. Reviewed International journal

    Nashima, K., Terakami, S., Nishitani, C., Yamamoto, T., Habu, T., Takahashi, H., Nakazono, M., Isuzugawa, K., Hanada, T., Takashina, T., Matsumoto, S., Otagaki, S., Mori, H., Oikawa, A. and Shiratake, K.

    Journal of Horticultural Science & Biotechnology   Vol. 89   page: 293-300   2014

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1080/14620316.2014.11513082

  45. Aerenchyma formation in crop species: a review. Invited Reviewed International journal

    Yamauchi, T., Shimamura, S., Nakazono, M. and Mochizuki, T.

    Field Crops Research   Vol. 152   page: 8-16   2013

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    Language:English  

    DOI: 10.1016/j.fcr.2012.12.008

  46. Molecular evidence for phytosiderophore-induced improvement of iron nutrition of peanut intercropped with maize in calcareous soil. Reviewed International coauthorship International journal

    Xiong, H., Kakei, Y., Kobayashi, T., Guo, X., Nakazono, M., Takahashi, H., Nakanishi, H., Shen, H., Zhang, F., Nishizawa, N.K. and Zuo, Y.

    Plant, Cell & Environment   Vol. 36   page: 1888-1902   2013

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/pce.12097

  47. Transcriptome analysis of developing ovules in rice isolated by laser microdissection. Reviewed International journal

    Kubo, T., Fujita, M., Takahashi, H., Nakazono, M., Tsutsumi, N. and Kurata, N.

    Plant and Cell Physiology   Vol. 54   page: 750-765   2013

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pct029

  48. Does suberin accumulation in plant roots contribute to waterlogging tolerance? Invited Reviewed International journal

    Watanabe, K., Nishiuchi, S., Kulichikhin, K. and Nakazono M.

    Frontiers in Plant Science   Vol. 4   page: e178   2013

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    Authorship:Last author, Corresponding author   Language:English  

    DOI: 10.3389/fpls.2013.00178

  49. Microarray analysis of gene expression patterns during fruit development in European pear (Pyrus communis). Reviewed International journal

    Nashima, K., Shimizu, T., Nishitani, C., Yamamoto, T., Takahashi, H., Nakazono, M., Itai, A., Isuzugawa, K., Hanada, T., Takashina, T., Matsumoto, S., Otagaki, S., Oikawa, A. and Shiratake, K.

    Scientia Horticulturae   Vol. 164   page: 466-473   2013

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.scienta.2013.09.054

  50. Transcriptome analysis of giant pear fruit with fruit-specific DNA reduplication on a mutant branch. Reviewed International journal

    Nashima, K., Takahashi, H., Nakazono, M., Shimizu, T., Nishitani, C., Yamamoto, T., Itai, A., Isuzugawa, K., Hanada, T., Takashina, T., Kato, M., Matsumoto, S., Oikawa, A. and Shiratake, K.

    Journal of the Japanese Society for Horticultural Science   Vol. 82   page: 301-311   2013

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.2503/jjshs1.82.301

  51. Cell type-specific transcriptome of Brassicaceae stigmatic papilla cells from a combination of laser microdissection and RNA sequencing. Reviewed International journal

    Osaka, M., Matsuda, T., Sakazono, S., Masuko-Suzuki, H., Maeda, S., Sewaki, M., Sone, M., Takahashi, H., Nakazono, M., Iwano, M., Takayama, S., Shimizu, K.K.., Yano, K., Lim, Y.P., Suzuki, G., Suwabe, K. and Watanabe, M.

    Plant and Cell Physiology   Vol. 54   page: 1894-1906   2013

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pct133

  52. Mechanisms for coping with submergence and waterlogging in rice. Invited Reviewed International journal

    Nishiuchi, S., Yamauchi, T., Takahashi, H., Kotula, L. and Nakazono, M.

    Rice   Vol. 5   page: e2   2012

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    DOI: doi:10.1186/1939-8433-5-2

  53. Acquisition of aluminum tolerance by modification of a single gene in barley. Reviewed International journal

    Fujii, M., Yokosho, K., Yamaji, N., Saisho, D., Yamane, M., Takahashi, H., Sato, K., Nakazono, M. and Ma, J.F.

    Nature Commun.   Vol. 3   page: 713   2012

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: doi:10.1038/ncomms1726

  54. Genome-wide transcriptome dissection of the rice root system: Implications for developmental and physiological functions. Reviewed International journal

    Takehisa, H., Sato, Y., Igarashi, M., Abiko, T., Antonio, B., Kamatsuki, K., Minami, H., Namiki, N., Inukai, Y., Nakazono, M. and Nagamura, Y.

    Plant J.   Vol. 69   page: 126–140   2012

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/j.1365-313X.2011.04777.x

  55. Cell-type specific transcriptome analysis in nodules of Lotus japonicas. Reviewed International journal

    Takanashi, K., Takahashi, H., Sakurai, N., Sugiyama, A., Shibata , D., Nakazono, M. and Yazaki, K.

    Mol. Plant-Microbe Interact.   Vol. 25   page: 869-876   2012

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1094/MPMI-01-12-0011-R

  56. Enhanced formation of aerenchyma and induction of a barrier to radial oxygen loss in adventitious roots of Zea nicaraguensis contribute to its waterlogging tolerance as compared with maize (Zea mays ssp. mays). Reviewed International coauthorship International journal

    Abiko, T., Kotula, L., Shiono, K., Malik, A.I., Colmer, T.D. and Nakazono, M.

    Plant Cell Environ.   Vol. 35   page: 1618–1630   2012

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    Authorship:Last author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/j.1365-3040.2012.02513.x

  57. AhNRAMP1 iron transporter is involved in iron acquisition in peanut. Reviewed International coauthorship International journal

    Xiong, H., Kobayashi, T., Kakei, Y., Senoura, T., Nakazono, M., Takahashi, H., Nakanishi, H., Shen, H., Duan, P., Guo, X., Nishizawa, N.K. and Zuo, Y.

    J. Exp. Bot.   Vol. 63   page: 4437–4446   2012

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/jxb/ers117

  58. Screening of candidate genes associated with constitutive aerenchyma formation in adventitious roots of the teosinte Zea nicaraguensis. Reviewed International journal

    Abiko, T., Obara, M., Abe, F., Kawaguchi, K., Oyanagi, A., Yamauchi, T. and Nakazono, M.

    Plant Root   Vol. 6   page: 19-27   2012

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.3117/plantroot.6.19

  59. Lysigenous aerenchyma formation in maize root is confined to cortical cells by regulation of genes related to generation and scavenging of reactive oxygen species. Reviewed International journal

    Yamauchi, T., Rajhi, I., and Nakazono, M.

    Plant Signal. Behav.   Vol. 6   page: 759-761   2011

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.4161/psb.6.5.15417

  60. Contrasting dynamics of radial O2-loss barrier induction and aerenchyma formation in rice roots of two lengths. Reviewed International coauthorship International journal

    Shiono, K., Ogawa, S., Yamazaki, S., Isoda, H., Fujimura, T., Nakazono, M. and Colmer, T.D.

    Annals of Botany   Vol. 107   page: 89–99   2011

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/aob/mcq221

  61. Identification of genes expressed in maize root cortical cells during lysigenous aerenchyma formation using laser microdissection and microarray analyses. Reviewed International coauthorship International journal

    Rajhi, I., Yamauchi, T., Takahashi, H., Nishiuchi, S., Shiono, K., Watanabe, R., Mliki, A., Nagamura, Y., Tsutsumi, N., Nishizawa, N.K. and Nakazono, M.

    New Phytol.   Vol. 190   page: 351-368   2011

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    Authorship:Last author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/j.1469-8137.2010.03535.x

  62. Cell division and cell elongation in the coleoptile of rice alcohol dehydrogenase 1-deficient mutant are reduced under complete submergence. Reviewed International journal

    Takahashi, H., Saika, H., Matsumura, H., Nagamura, Y., Tsutsumi, N., Nishizawa, N.K. and Nakazono, M.

    Annals of Botany   Vol. 108   page: 253-261   2011

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/aob/mcr137

  63. Comprehensive network analysis of anther-expressed genes in rice by the combination of 33 laser microdissection and 143 spatiotemporal microarrays. Reviewed International journal

    Aya, K., Suzuki, G., Suwabe, K., Hobo, T., Takahashi, H., Shiono, K., Yano, K., Tsutsumi, N., Nakazono, M., Nagamura, Y., Matsuoka, M. and Watanabe, M.

    PLoS ONE   Vol. 6   page: e26162   2011

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1371/journal.pone.0026162

  64. A method for obtaining high quality RNA from paraffin sections of plant tissues by laser microdissection. Reviewed International journal

    Takahashi, H., Kamakura, H., Sato, Y., Shiono, K., Abiko, T., Tsutsumi, N., Nagamura, Y., Nishizawa, N.K. and Nakazono, M

    J. Plant Res.   Vol. 123   page: 807–813   2010

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s10265-010-0319-4

  65. Strigolactones negatively regulate mesocotyl elongation in rice during germination and growth in darkness. Reviewed International coauthorship International journal

    Hu, Z., Yan, H., Yang, J., Yamaguchi, S., Maekawa, M., Takamure, I., Tsutsumi, N., Kyozuka, J. and Nakazono, M.

    Plant Cell Physiol.   Vol. 51   page: 1136-1142   2010

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    DOI: 10.1093/pcp/pcq075

  66. Apple phloem cells contain some mRNAs transported over long distances. Reviewed International journal

    Kanehira, A., Yamada, K., Iwaya, T., Tsuwamoto, R., Kasai, A., Nakazono, M. and Harada, T.

    Tree Genet. Genomes   Vol. 6   page: 635-642   2010

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s11295-010-0279-9

  67. Fusion of mitochondria in tobacco suspension cultured cells is dependent on the cellular ATP level but not on actin polymerization. Reviewed International journal

    Wakamatsu, K., Fujimoto, M., Nakazono, M., Arimura, S. and Tsutsumi, N.

    Plant Cell Rep.   Vol. 29   page: 1139-1145   2010

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s00299-010-0897-6

  68. A receptor-like kinase, KLAVIER, mediates systemic regulation of nodulation and non-symbiotic shoot development in Lotus japonicus. International journal

    Miyazawa, H., Oka-Kira, E., Sato, N., Takahashi, H., Wu, G. J., Sato, S., Hayashi, M., Betsuyaku, S., Nakazono, M., Tabata, S., Harada, K., Sawa, S., Fukuda, H. and Kawaguchi, M.

    Development   Vol. 137   page: 4317-4325   2010

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1242/dev.058891

  69. Arabidopsis dynamin-related proteins DRP3A and DRP3B are functionally redundant in mitochondrial fission but have distinct roles in peroxisomal fission. Reviewed International journal

    Fujimoto, M., Arimura, S., Mano, S., Kondo, M., Saito, C., Ueda, T., Nakazono, M., Nakano, A., Nishimura, M. and Tsutsumi, T.

    Plant J.   Vol. 58   page: 388-400   2009

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/j.1365-313X.2009.03786.x

  70. Rice OsYSL15 is an iron-regulated iron(III)-deoxymugineic acid transporter expressed in the roots and is essential for iron uptake in early growth of the seedlings. Reviewed International journal

    Inoue, H., Kobayashi, T., Nozoye, T., Takahashi, M., Kakei, Y., Suzuki, K., Nakazono, M., Nakanishi, H., Mori, S. and Nishizawa, N.K.

    J. Biol. Chem.   Vol. 284   page: 3470-3479   2009

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    DOI: 10.1074/jbc.M806042200

  71. Formation of grain chalkiness and changes in water distribution in developing rice caryopses grown under high-temperature stress. Reviewed International journal

    Ishimaru, T., Horigane, A.K., Ida, M., Iwasawa, N., San-oh, Y.A., Nakazono, M., Nishizawa, N.K., Masumura, T., Kondo, M. and Yoshida, M.

    J. Cereal Sci.   Vol. 50   page: 166-174   2009

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    DOI: 10.1016/j.jcs.2009.04.011

  72. Nod factor/nitrate-induced CLE genes that drive HAR1-mediated systemic regulation of nodulation. Reviewed International journal

    Okamoto, S., Ohnishi, E., Sato, S., Takahashi, H., Nakazono, M., Tabata, S. and Kawaguchi, M.

    Plant Cell Physiol.   Vol. 50   page: 67-77   2009

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pcn194

  73. Role of ethylene in acclimations to promote oxygen transport in roots of plants in waterlogged soils. Reviewed International coauthorship International journal

    Shiono, K., Takahashi, H., Colmer, T.D. and Nakazono, M.

    Plant Sci.   Vol. 175   page: 52-58   2008

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.plantsci.2008.03.002

  74. Separated transcriptomes of male gametophyte and tapetum in rice: validity of a laser microdissection (LM) microarray. Reviewed International journal

    Suwabe, K., Suzuki, G., Takahashi, H., Shiono, K., Endo, M., Yano, K., Fujita, M., Masuko, H., Saito, H., Fujioka, T., Kaneko, F., Kazama, T., Mizuta, Y., Kawagishi-Kobayashi, M., Tsutsumi, N., Kurata, N., Nakazono, M. and Watanabe, M.

    Plant Cell Physiol.   Vol. 49   page: 1407-1416   2008

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pcn124

  75. Arabidopsis dynamin-related protein DRP2B is co-localized with DRP1A on the leading edge of the forming cell plate. Reviewed International journal

    Fujimoto, M., Arimura, S., Nakazono, M. and Tsutsumi, N.

    Plant Cell Rep.   Vol. 27   page: 1581-1586   2008

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s00299-008-0583-0

  76. Drought induction of Arabidopsis 9-cis-epoxycarotenoid dioxygenase occurs in vascular parenchyma cells. Reviewed International journal

    Endo, A., Sawada, Y., Takahashi, H., Okamoto, M., Ikegami, K., Koiwai, H., Seo, M., Toyomasu, T., Mitsuhashi, W., Shinozaki, K., Nakazono, M., Kamiya, Y., Koshiba, T. and Nambara, E.

    Plant Physiol.   Vol. 147   page: 1984-1993   2008

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1104/pp.108.116632

  77. Arabidopsis ELM1 is required for the localization of dynamin-related protein DRP3A to mitochondrial fission sites. Reviewed International journal

    Arimura, S., Fujimoto, M., Doniwa, Y., Kadoya, N., Nakazono, M., Sakamoto, W. and Tsutsumi, N.:

    Plant Cell   Vol. 20   page: 1555-1566   2008

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1105/tpc.108.058578

  78. Various spatiotemporal expression profiles of anther-expressed genes in rice. Reviewed International journal

    Hobo, T., Suwabe, K., Aya, K., Suzuki, G., Yano, K., Ishimizu, T., Fujita, M., Kikuchi, S., Hamada, K., Miyano, M., Fujioka, T., Kaneko, F., Kazama, T., Mizuta, Y., Takahashi, H., Shiono, K., Nakazono, M., Tsutsumi, N., Nagamura, Y., Kurata, N., Watanabe, M. and Matsuoka, M.

    Plant Cell Physiol.   Vol. 49   page: 1417-1428   2008

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pcn128

  79. Cell type-specific gene expression profiling in plants by using a combination of laser microdissection and high-throughput technologies. Reviewed International coauthorship International journal

    Ohtsu, K., Takahashi, H., Schnable, P.S. and Nakazono, M.

    Plant Cell Physiol.   Vol. 48   page: 3-7   2007

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pcl049

  80. Rice tillering dwarf mutant dwarf3 has increased leaf longevity during darkness-induced senescence or hydrogen peroxide-induced cell death. Reviewed International journal

    Yan, H., Saika, H., Maekawa, M., Takamure, I., Tsutsumi, N., Kyozuka, J. and Nakazono, M.

    Genes Genet. Syst.   Vol. 82   page: 361-366   2007

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1266/ggs.82.361

  81. A method for obtaining high integrity RNA from developing aleurone cells and starchy endosperm in rice (Oryza sativa L.) by laser microdissection. Reviewed International journal

    Ishimaru, T., Nakazono, M., Masumura, T., Abiko, M., San-oh, Y., Nishizawa, N. K. and Kondo, M.

    Plant Sci.   Vol. 173   page: 321-326   2007

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.plantsci.2007.06.004

  82. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8´-hydroxylase in rice. International journal

    Saika, H., Okamoto, M., Miyoshi, K., Kushiro, T., Shinoda, S., Jikumaru, Y., Fujimoto, M., Arikawa, T., Takahashi, H., Ando, M., Arimura, S., Miyao, A., Hirochika, H., Kamiya, Y., Tsutsumi, N., Nambara, E. and Nakazono, M.

    Plant Cell Physiol.   Vol. 48   page: 287-298   2007

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pcm003

  83. Isolation of MaDEF from Muscari armeniacum and analysis of its expression using laser microdissection. Reviewed International journal

    Nakada, M., Komatsu, M., Ochiai, T., Ohtsu, K., Nakazono, M., Nishizawa, N.K., Nitta, K., Nishiyama, R., Kameya, T. and Kanno, A.

    Plant Sci.   Vol. 170   page: 143-150   2006

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.plantsci.2005.08.021

  84. Analysis of expression of genes for mitochondrial aldehyde dehydrogenase in maize during submergence and following re-aeration. Reviewed International journal

    Meguro, N., Tsuji, H., Suzuki, Y., Tsutsumi, N., Hirai, A. and Nakazono, M.

    Breed. Sci.   Vol. 56   page: 365-370   2006

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1270/jsbbs.56.365

  85. Dynamic and reversible changes in histone H3-Lys4 methylation and H3 acetylation occurring at submergence-inducible genes in rice. Reviewed International journal

    Tsuji, H., Saika, H., Tsutsumi, N., Hirai, A. and Nakazono, M.

    Plant Cell Physiol.   Vol. 47   page: 995-1003   2006

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pcj072

  86. GAMYB controls different sets of genes and is differentially regulated by microRNA in aleurone cells and anthers. Reviewed International journal

    Tsuji, H., Aya, K., Ueguchi-Tanaka, M., Shimada, Y., Nakazono, M., Watanabe, R., Nishizawa, N.K., Gomi, K., Shimada, A., Kitano, H., Ashikari, M. and Matsuoka, M.

    Plant J.   Vol. 47   page: 427-444   2006

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/j.1365-313X.2006.02795.x

  87. A point mutation of Adh1 gene is involved in repression of coleoptile elongation under submergence in rice. Reviewed International journal

    Saika, H., Matsumura, H., Takano, T., Tsutsumi, N. and Nakazono, M.

    Breed Sci.   Vol. 56   page: 69-74   2006

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1270/jsbbs.56.69

  88. Rice plants take up iron as an Fe3+-phytosiderophore and as Fe2+. Reviewed International journal

    Ishimaru, Y., Suzuki, M., Tsukamoto, T., Suzuki, K., Nakazono, M., Kobayashi, T., Wada, Y., Watanabe, S., Matsuhashi, S., Takahashi, M., Nakanishi, H., Mori, S. and Nishizawa, N.K.

    Plant J.   Vol. 45   page: 335-346   2006

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/j.1365-313X.2005.02624.x

  89. cDNA microarray analysis of gene expression changes during pollination, pollen-tube elongation, fertilization, and early embryogenesis in rice pistils. Reviewed International journal

    Yoshida, K.T., Endo, M., Nakazono, M., Fukuda, H., Demura, T., Tsuchiya, T. and Watanabe, M.

    Sex. Plant Reprod.   Vol. 17   page: 269-275   2005

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s00497-004-0238-4

  90. Anaconda, a new class of transposon belonging to the Mu superfamily, has diversified by acquiring host genes during rice evolution. Reviewed International journal

    Ohtsu, K., Hirano, H., Tsutsumi, N., Hirai, A. and Nakazono, M.

    Mol. Genet. Genomics   Vol. 274   page: 606-615   2005

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s00438-005-0053-0

  91. A transposon-induced spontaneous mutation results in low β-amylase content in rice. Reviewed International journal

    Saika, H., Nakazono, M., Ikeda, A., Yamaguchi, J., Masaki, S., Kanekatsu, M. and Nemoto, K.

    Plant Sci.   Vol. 169   page: 239-244   2005

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.plantsci.2005.03.022

  92. Global expression profiling applied to plant development. Reviewed International coauthorship International journal

    Schnable, P.S., Hochholdinger, F. and Nakazono, M.

    Curr. Opin. Plant Biol.   Vol. 7   page: 50-56   2004

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.pbi.2003.11.001

  93. A rice dynamin-like protein, OsDRP3A, is involved in mitochondrial fission. Reviewed International journal

    Fujimoto, M., Arimura, S., Nakazono, M. and Tsutsumi, N.

    Breed. Sci.   Vol. 54   page: 367-372   2004

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1270/jsbbs.54.367

  94. Frequent fusion and fission of plant mitochondria with unequal nucleoid distribution. Reviewed International journal

    Arimura, S., Yamamoto, J., Aida, G.P., Nakazono, M. and Tsutsumi, N.

    Proc. Natl. Acad. Sci. USA   Vol. 101   page: 7805-7808   2004

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1073/pnas.0401077101

  95. Arabidopsis dynamin-like protein 2a (ADL2a), like ADL2b, is involved in plant mitochondrial division. Reviewed International journal

    Arimura, S., Aida, G.P., Fujimoto, M., Nakazono, M. and Tsutsumi, N.

    Plant Cell Physiol.   Vol. 45   page: 236-242   2004

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/pcp/pch024

  96. The rice pyruvate decarboxylase 3 gene, which lacks introns, is transcribed in mature pollen. Reviewed International journal

    Li, Y., Ohtsu, K., Nemoto, K., Tsutsumi, N., Hirai, A. and Nakazono, M.

    J. Exp. Bot.   Vol. 55   page: 145-146   2004

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/jxb/erh029

  97. Organ-specific expressions and chromosomal locations of two mitochondrial aldehyde dehydrogenase genes from rice (Oryza sativa L.), ALDH2a and ALDH2b. Reviewed International journal

    Tsuji, H., Tsutsumi, N., Sasaki, T., Hirai, A. and Nakazono, M.

    Gene   Vol. 305   page: 195-204   2003

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/S0378-1119(03)00383-4

  98. Induction of mitochondrial aldehyde dehydrogenase by submergence facilitates oxidation of acetaldehyde during re-aeration in rice. Reviewed International journal

    Tsuji, H., Meguro, N., Suzuki, Y., Tsutsumi, N., Hirai, A. and Nakazono, M.

    FEBS Lett.   Vol. 546   page: 369-373   2003

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/S0014-5793(03)00631-8

  99. Laser capture microdissection, a tool for the global analysis of gene expression in specific plant cell types: Identification of genes differentially expressed in epidermal cells or vascular tissues of maize. Reviewed International coauthorship International journal

    Nakazono, M., Qiu, F., Borsuk, L.A. and Schnable, P.S.

    Plant Cell   Vol. 15   page: 583-596   2003

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1105/tpc.008102

  100. The complete sequence of rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during evolution of flowering plants. Reviewed International journal

    Notsu, Y., Masood, S., Nishikawa, T., Kubo, N., Akiduki, G., Nakazono, M., Hirai, A. and Kadowaki, K.

    Mol. Gen. Genomics   Vol. 268   page: 434-445   2002

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s00438-002-0767-1

  101. ABA-independent expression of rice alternative oxidase genes under environmental stresses. Reviewed International journal

    Ohtsu, K., Ito, Y., Saika, H., Nakazono, M., Tsutsumi, N. and Hirai, A.

    Plant Biotechnol.   Vol. 19   page: 187-190   2002

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.5511/plantbiotechnology.19.187

  102. AOX1c, a novel rice gene for alternative oxidase; comparison with rice AOX1a and AOX1b. Reviewed International journal

    Saika, H., Ohtsu, K., Hamanaka, S., Nakazono, M., Tsutsumi, N. and Hirai, A.

    Genes Genet. Syst.   Vol. 77   page: 31-38   2002

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    DOI: 10.1266/ggs.77.31

  103. Decreased transcription of a gene encoding putative mitochondrial aldehyde dehydrogenase in barley (Hordeum vulgare L.) under submerged conditions. Reviewed International journal

    Meguro, N., Nakazono, M., Tsutsumi, N. and Hirai, A.

    Plant Biotechnol.   Vol. 18   page: 223-228   2001

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.5511/plantbiotechnology.18.223

  104. ATP synthesis inhibitors as well as respiratory inhibitors increase steady-state level of alternative oxidase mRNA in Arabidopsis thaliana. Reviewed International journal

    Saisho, D., Nakazono, M., Tsutsumi, N. and Hirai, A.

    J. Plant Physiol.   Vol. 158   page: 241-245   2001

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1078/0176-1617-00193

  105. Characterization and expression of the genes for cytochrome c oxidase subunit VIb (COX6b) from rice and Arabidopsis thaliana. Reviewed International journal

    Ohtsu, K., Nakazono, M., Tsutsumi, N. and Hirai, A.

    Gene   Vol. 264   page: 233-239   2001

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/S0378-1119(01)00334-1

  106. The gene for alternative oxidase-2 (AOX2) from Arabidopsis thaliana consists of five exons unlike other AOX genes and is transcribed at an early stage during germination. Reviewed International journal

    Saisho, D., Nakazono, M., Lee, K.H., Tsutsumi, N., Akita, S. and Hirai, A.

    Genes Genet. Syst.   Vol. 76   page: 89-97   2001

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1266/ggs.76.89

  107. Expression of a gene encoding mitochondrial aldehyde dehydrogenase in rice increases under submerged conditions. Reviewed International journal

    Nakazono, M., Tsuji, H., Li, Y., Saisho, D., Arimura, S., Tsutsumi, N. and Hirai, A.

    Plant Physiol.   Vol. 124   page: 587-598   2000

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1104/pp.124.2.587

  108. Characterization of two cDNA clones encoding isozymes of the F1F0-ATPase inhibitor protein of rice mitochondria. Reviewed International journal

    Nakazono, M., Imamura, T., Tsutsumi, N., Sasaki, T. and Hirai, A.

    Planta   Vol. 210   page: 188-194   2000

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/PL00008125

  109. Molecular and cellular characterizations of a cDNA clone encoding a novel isozyme of aldehyde dehydrogenase from rice. Reviewed International journal

    Li, Y., Nakazono, M., Tsutsumi, N. and Hirai, A.

    Gene   Vol. 249   page: 67-74   2000

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/S0378-1119(00)00152-9

  110. Transcript levels of the nuclear-encoded respiratory genes in rice decrease by oxygen deprivation: evidence for involvement of calcium in expression of the alternative oxidase 1a gene. Reviewed International journal

    Tsuji, H., Nakazono, M., Saisho, D., Tsutsumi, N. and Hirai, A.

    FEBS Lett.   Vol. 471   page: 201-204   2000

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/S0014-5793(00)01411-3

  111. AtUCP2: a Novel isoform of the mitochondrial uncoupling protein of Arabidopsis thaliana. Reviewed International journal

    Watanabe, A., Nakazono, M., Tsutsumi, N. and Hirai, A.

    Plant Cell Physiol.   Vol. 40   page: 1160-1166   1999

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/oxfordjournals.pcp.a029501

  112. Characterization of a cDNA encoding a novel subunit for cytochrome c oxidase (COX6b) from rice. Reviewed International journal

    Ohtsu, K., Hamanaka, S., Yamazaki, K., Nakazono, M. and Hirai, A.

    Breed. Sci.   Vol. 49   page: 211-215   1999

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1270/jsbbs.49.211

  113. Identification of cDNA encoding cytochrome c oxidase subunit 5c (COX5c) from rice: comparison of its expression with nuclear-encoded and mitochondrial-encoded COX genes. Reviewed International journal

    Hamanaka, S., Ohtsu, K., Kadowaki, K., Nakazono, M. and Hirai, A.

    Genes Genet. Syst.   Vol. 74   page: 71-75   1999

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1266/ggs.74.71

  114. A novel plant nuclear gene coding for chloroplast ribosomal protein S9 has a transit peptide related to that of rice chloroplast ribosomal protein L12. Reviewed International journal

    Arimura, S., Takusagawa, S., Hatano, S., Nakazono, M., Hirai, A. and Tsutsumi, N.

    FEBS Lett.   Vol. 450   page: 231-234   1999

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/S0014-5793(99)00491-3

  115. Transcription of plastid-derived tRNA genes in rice mitochondria. Reviewed International journal

    Miyata, S., Nakazono, M. and Hirai, A.

    Curr. Genet.   Vol. 34   page: 216-220   1998

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s002940050389

  116. A rapid and efficient method for the isolation of differentially expressed genes: Simplified differential display. Reviewed International journal

    Nakazono, M. and Yoshida, K.T.

    Plant Biotechnol.   Vol. 14   page: 187-190   1997

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.5511/plantbiotechnology.14.187

  117. A chloroplast derived trnH gene is expressed in the mitochondrial genome of gramineous plants. Reviewed International journal

    Kanno, A., Nakazono, M., Hirai, A. and Kameya, T.

    Plant Mol. Biol.   Vol. 34   page: 353-356   1997

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1023/A:1005828728036

  118. Characterization of the gene family for alternative oxidase from Arabidopsis thaliana. Reviewed International journal

    Saisho, D., Nambara, E., Naito, S., Tsutsumi, N., Hirai, A. and Nakazono, M.

    Plant Mol. Biol.   Vol. 35   page: 585-596   1997

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1023/A:1005818507743

  119. Maintenance of chloroplast-derived sequences in the mitochondrial DNA of Gramineae. Reviewed International journal

    Kanno, A., Nakazono, M., Hirai, A. and Kameya, T.

    Curr. Genet.   Vol. 32   page: 413-419   1997

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s002940050296

  120. Transcript levels of tandem-arranged alternative oxidase genes in rice are increased by low temperature. Reviewed International journal

    Ito, Y., Saisho, D., Nakazono, M., Tsutsumi, N. and Hirai, A.

    Gene   Vol. 203   page: 121-129   1997

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/S0378-1119(97)00502-7

  121. A chloroplast-derived sequence is utilized as a source of promoter sequences for the gene for subunit 9 of NADH dehydrogenase (nad9) in rice mitochondria. Reviewed International journal

    Nakazono, M., Nishiwaki, S., Tsutsumi, N. and Hirai, A.

    Mol. Gen. Genet.   Vol. 252   page: 371-378   1996

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/BF02173001

  122. Multiple initiation sites for transcription of a gene for subunit 1 of F1-ATPase (atp1) in rice mitochondria. Reviewed International journal

    Nakazono, M., Ishikawa, M., Yoshida, K.T., Tsutsumi, N. and Hirai, A.

    Curr. Genet.   Vol. 29   page: 417-422   1996

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/BF02221508

  123. The gene for a subunit of an ABC-type heme transporter is transcribed together with the gene for subunit 6 of NADH dehydrogenase in rice mitochondria. Reviewed International journal

    Nakazono, M., Ito, Y., Tsutsumi, N. and Hirai, A.

    Curr. Genet.   Vol. 29   page: 412-416   1996

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/BF02221507

  124. RNA editing of transcripts of the gene for apocytochrome b (cob) in rice mitochondria. Reviewed International journal

    Ito, Y., Nakazono, M., Kadowaki, K., Tsutsumi, N. and Hirai, A.

    Genes Genet. Syst.   Vol. 71   page: 85-89   1996

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1266/ggs.71.85

  125. Homologous recombination mediated by two palindromic repeated sequences in the mitochondrial genome of Oryza. Reviewed International journal

    Nakazono, M., Kanno, A., Tsutsumi, N. and Hirai, A.

    Theor. Appl. Genet.   Vol. 91   page: 1-8   1995

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/BF00220851

  126. Structure of a gene for subunit 9 of NADH dehydrogenase (nad9) in rice mitochondria and RNA editing of its transcript. Reviewed International journal

    Nishiwaki, S., Nakazono, M., Tsutsumi, N. and Hirai, A.

    Plant Cell Physiol.   Vol. 36   page: 1135-1138   1995

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/oxfordjournals.pcp.a078858

  127. A small repeated sequence contains the transcription initiation sites for both trnfM and rrn26 in rice mitochondria. Reviewed International journal

    Nakazono, M., Tsutsumi, N., Sugiura, M. and Hirai, A.

    Plant Mol. Biol.   Vol. 28   page: 343-346   1995

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/BF00020253

  128. The CRTA motif is present in the promoters of mitochondrial genes of rice. Reviewed International journal

    Nakazono, M., Tsutsumi, N. and Hirai, A.

    Plant Sci.   Vol. 105   page: 227-234   1995

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/0168-9452(94)04046-X

  129. The rps3-rpl16-nad3-rps12 gene cluster in rice mitochondrial DNA is transcribed from alternative promoters. Reviewed International journal

    Nakazono, M., Itadani, H., Wakasugi, T., Tsutsumi, N., Sugiura, M. and Hirai, A.

    Curr. Genet.   Vol. 27   page: 184-189   1995

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/BF00313433

  130. Palindromic repeated sequences (PRSs) in the mitochondrial genome of rice: evidence for their insertion after divergence of the genus Oryza from the other Gramineae. Reviewed International journal

    Nakazono, M., Kanno, A., Tsutsumi, N. and Hirai, A.

    Plant Mol. Biol.   Vol. 24   page: 273-281   1994

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/BF00020167

  131. Nucleotide sequence of a 28 kbp portion of rice mitochondrial DNA: the existence of many sequences that correspond to parts of mitochondrial genes in intergenic regions. Reviewed International journal

    Itadani, H., Wakasugi, T., Sugita, M., Sugiura, M., Nakazono, M. and Hirai, A.

    Plant Cell Physiol.   Vol. 35   page: 1239-1244   1994

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/oxfordjournals.pcp.a078718

  132. Evolutionary variation in DNA sequences transferred from chloroplast genomes to mitochondrial genomes in the Gramineae. Reviewed International journal

    Watanabe, N., Nakazono, M., Kanno, A., Tsutsumi, N. and Hirai, A.

    Curr. Genet.   Vol. 26   page: 512-518   1994

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/BF00309942

  133. Six percent of the mitochondrial genome in rice came from chloroplast DNA. Reviewed International journal

    Hirai, A. and Nakazono, M.

    Plant Mol. Biol. Reporter   Vol. 11   page: 98-100   1993

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/BF02670465

  134. Identification of the entire set of transferred chloroplast DNA sequences in the mitochondrial genome of rice. Reviewed International journal

    Nakazono, M. and Hirai, A.

    Mol. Gen. Genet.   Vol. 236   page: 341-346   1993

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/BF00277131

  135. Genetic and physical maps and a clone bank of mitochondrial DNA from rice. Reviewed International journal

    Iwahashi, M., Nakazono, M., Kanno, A., Sugino, K., Ishibashi, T. and Hirai, A.

    Theor. Appl. Genet.   Vol. 84   page: 275-279   1992

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/BF00229482

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Books 16

  1. Roles of phytohormones in morphological and anatomical responses of plants to flooding stress. [Plant Hormones under Challenging Environmental Factors. (Ahammed, G.J. and Yu, J. (eds))]

    Hu, Z., Qi, X., Zhang, M., Chen, X. and Nakazono, M( Role: Joint author)

    Springer  2016 

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    Language:English Book type:Scholarly book

  2. Aerenchyma formation in plants. [Plant Cell Monographs: Low-Oxygen Stress in Plants. (J. T. van Dongen and F. Licausi (Eds.))]

    Takahashi, H. Yamauchi, T., Colmer, T.D. and Nakazono, M.( Role: Joint author)

    Springer  2014 

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    Language:English

  3. 植物の通気組織形成過程におけるメタロチオネインの組織特異的な発現制御. 「生化学」

    山内卓樹、西内俊策、中園幹生( Role: Joint author)

    日本生化学会  2012 

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    Language:Japanese

  4. 過湿土壌に対する作物の応答と適応機構. 「湿地環境と作物―環境と調和した作物生産をめざして― (坂上 潤一、中園 幹生、島村 聡、伊藤 治、石澤 公明 (編著))」

    塩野克宏、高橋宏和、中園幹生( Role: Joint author)

    養賢堂  2010 

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  5. 種子形成・発芽過程におけるヒストン修飾による遺伝子発現調節. 「種子の科学とバイオテクノロジー (原田久也(監修)、種子生理生化学研究会(編))」

    中園幹生( Role: Sole author)

    学会出版センター  2009 

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    Language:Japanese

  6. イネ実生の嫌気応答:冠水下で伸びる謎に迫る. 「発芽生物学―種子発芽の生理・生態・分子機構― (種生物学会(吉岡俊人、清和研二)編)」

    高橋宏和、中園幹生( Role: Joint author)

    文一総合出版  2009 

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    Language:Japanese

  7. Abiotic stress. [Rice Biology in the Genomics Era (Hirai, H., Sasaki, T., Sano, Y. and Hirano, H. (eds))]

    Ohnishi, T., Nakazono, M. and Tsutsumi, N.( Role: Joint author)

    Springer  2008 

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    Language:English

  8. Frequent DNA transfer among mitochondrial, plastid and nuclear genomes of rice during evolution. [Rice Biology in the Genomics Era (Hirai, H., Sasaki, T., Sano, Y. and Hirano, H. (eds)) ]

    Nakazono, M. and Hirai, A.( Role: Joint author)

    Springer  2008 

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    Language:English

  9. 植物は過湿土壌にどのように適応しているのか 「化学と生物」

    塩野克宏、高橋宏和、中園幹生( Role: Joint author)

    学会出版センター  2008 

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    Language:Japanese

  10. 環境ストレスに応答したヒストン修飾の制御. 「植物のエピジェネティクス(細胞工学別冊 植物細胞工学24)」

    辻 寛之、中園幹生( Role: Joint author)

    秀潤社  2008 

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    Language:Japanese

  11. ヒストン修飾による植物の環境応答. 「化学と生物」

    中園幹生、三好健太郎、松永幸大( Role: Joint author)

    学会出版センター  2007 

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  12. 植物のヒストン翻訳後修飾研究の幕開け. 「化学と生物」

    松永幸大、栗原大輔、中園幹生( Role: Joint author)

    学会出版センター  2006 

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  13. Involvement of aldehyde dehydrogenase in alleviation of post-anoxic injury in rice. [Abiotic stress tolerance in plants --Toward the improvement of global environment and food-- (Rai, A.K. and Takabe, T. (eds))]

    Meguro, N., Tsuji, H., Tsutsumi, N., Nakazono, M. and Hirai, A.( Role: Joint author)

    Springer  2006 

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  14. 酸化ストレスとミトコンドリア機能. 「二重膜オルガネラの遺伝学 (蛋白質核酸酵素(2005年11月号増刊))」

    目黒直樹、最相大輔、中園幹生( Role: Joint author)

    共立出版  2005 

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  15. Gene structure and expression of alternative oxidases from Arabidopsis thaliana and Oryza sativa. [Plant mitochondria: from gene to function]

    Nakazono, M., Saisho, D., Ito, Y., Hamanaka, S., Tsujii, T. and Hirai, A.( Role: Joint author)

    Backhuys Publishers  1998 

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  16. 高等植物のミトコンドリアゲノム:ゲノム構造とその再編成 「蛋白質核酸酵素」

    中園幹生、平井篤志( Role: Joint author)

    共立出版  1992 

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Presentations 10

  1. RNA-Seq解析によるZea nicaraguensisの酸素漏出バリア形成に関与する重要遺伝子の探索

    中山洋平、高橋宏和、Maurizio Camagna、佐藤 豊、豊田 敦、大森 史恵、間野吉郎、中園 幹生

    日本育種学会第139回講演会  2021.3.19 

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    Event date: 2021.3

    Language:Japanese   Presentation type:Oral presentation (general)  

  2. Zea nicaraguensisの側根に形成される酸素漏出バリアの遺伝・生理学的解析 International coauthorship

    中園幹生、中山洋平、安江広樹、黒川裕介、Ole Pedersen、Anja Heidi Floytrup、Timothy David Colmer、高橋宏和、大森史恵、間野吉郎

    日本育種学会第138回講演会  2020.10.11 

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    Event date: 2020.10

    Language:Japanese   Presentation type:Poster presentation  

  3. イネの側根による通気組織形成の抑制機構

    中園幹生、清水春衣、高橋宏和、志水(佐藤) 佐江、佐藤 豊

    日本植物学会第84回講演会  2020.9.20 

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    Event date: 2020.9

    Language:Japanese   Presentation type:Oral presentation (general)  

  4. Roles of plant hormones in anatomical responses of roots to flooding stress Invited International conference

    Mikio Nakazono

    23rd International Conference on Plant Growth Substances   2019.6.26 

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    Event date: 2019.6

    Language:English  

    Venue:Paris   Country:France  

  5. Molecular mechanisms for constitutive and inducible lysigenous aerenchyma formation in rice root Invited International conference

    Mikio Nakazono

    13th International Society of Plant Anaerobiosis Conference  2019.6.4 

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    Event date: 2019.6

    Language:English   Presentation type:Oral presentation (invited, special)  

    Venue:Taipei   Country:Taiwan, Province of China  

  6. Genetic and physiological analyses of root traits for internal aeration of plants under flooded soil conditions Invited

    Mikio Nakazono

    Anmeldung zu einem Vortrag im Rahmen des Botanischen Kolloquiums  2019.5.17 

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    Event date: 2019.5

    Language:English   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:Bonn   Country:Germany  

  7. Root traits that determine waterlogging resilience in rice and maize Invited International conference

    Mikio Nakazono

    Keystone Symposia Conference - Climate Change-Linked Stress Tolerance in Plants   2019.5.15 

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    Event date: 2019.5

    Language:English   Presentation type:Oral presentation (invited, special)  

    Venue:Hannover   Country:Germany  

  8. Characterization of the root traits for internal aeration of rice under flooded soil conditions Invited International conference

    Mikio Nakazono

    16th International Symposium on Rice Functional Genomics   2018.9.5 

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    Event date: 2018.9

    Language:English  

    Venue:Tokyo   Country:Japan  

  9. Genetic and physiological analyses of the root traits for internal aeration of crops under flooded soil conditions Invited

    Mikio Nakazono

    International Symposium on Crop Roots and Rhizosphere Interactions  2017.10.10 

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    Event date: 2017.10

    Language:English   Presentation type:Oral presentation (invited, special)  

    Venue:Yangling   Country:China  

  10. The roles of ethylene and auxin in constitutive lysigenous aerenchyma formation in rice root International conference

    Mikio Nakazono

    12th International Society for Plant Anaerobiosis Conference  2016.9.7 

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    Event date: 2016.9

    Language:English   Presentation type:Oral presentation (invited, special)  

    Venue:Helsingør   Country:Denmark  

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Research Project for Joint Research, Competitive Funding, etc. 5

  1. 野生遺伝資源を活用したイネ科新奇食糧資源の開拓

    2020.12 - 2023.3

    JST未来社会創造事業 

    佐藤 豊 (研究代表者)

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    Authorship:Coinvestigator(s)  Grant type:Competitive

  2. 植物環境応答のモデル化に基づく発展型ゲノミックセレクションシステムの開発

    2016.10 - 2022.3

    JST CREST 

    岩田洋佳(研究代表者)

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  3. 統合オミクス情報を利用したトマトの体系的最適栽培管理技術の開発

    2014.4 - 2019.3

    戦略的イノベーション創造プログラム(SIP)(次世代農林水産業創造技術)  SIP

    坂田好輝(研究代表者)

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    Authorship:Coinvestigator(s)  Grant type:Competitive

  4. Rice and seagrass roots in anoxic sediments: coping with soil phytotoxins for productive wetland crops and aquatic ecosystems International coauthorship

    2017.1 - 2017.12

    UWA Research Collaboration Awards 

    Tim Colmer, Ole Pedersen, Mikio Nakazono, Hirokazu Takahashi

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    Authorship:Coinvestigator(s)  Grant type:Competitive

  5. ダイズにおける有用トリテルペン(ルペオールおよびベツリン酸)の合成酵素の機能解析

    2013.4 - 2014.3

    不二たん白質研究振興財団 研究助成 

    中園幹生

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    Authorship:Principal investigator 

KAKENHI (Grants-in-Aid for Scientific Research) 19

  1. トウモロコシ属植物の耐湿性獲得機構の全容解明と分子育種への応用

    Grant number:21H04724  2021.4 - 2025.3

    日本学術振興会  科学研究費補助金  基盤研究(A)

    中園幹生(研究代表者)、間野吉郎、村瀬 潤、高橋秀和

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\41860000 ( Direct Cost: \32200000 、 Indirect Cost:\9660000 )

  2. 根圏マイクロバイオームを活用した持続型農業を実現するイネ遺伝子の探索と育種利用

    Grant number:21K18221  2021.7 - 2024.3

    日本学術振興会  科学研究費補助金   挑戦的研究(開拓)

    中園幹生(研究代表者)、村瀬 潤、藤原 徹

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\26000000 ( Direct Cost: \20000000 、 Indirect Cost:\6000000 )

  3. 土相・水相・気相の三相をまたぐ不規則な環境変動に対するレジリエンス機構

    Grant number:20H05912  2020.11 - 2025.3

    日本学術振興会  科学研究費補助金  学術変革領域研究(A)

    芦苅基行(研究代表者)、打田直行、中園幹生

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    Authorship:Coinvestigator(s) 

  4. Understanding of genetic and physiological regulation of a radial oxygen loss barrier in rice roots

    Grant number:20F20393  2020.11 - 2023.3

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    Authorship:Principal investigator  Grant type:Competitive

  5. 根の通気組織がトウモロコシの環境ストレス耐性向上に及ぼす効果の検証とその機構解明

    Grant number:20K05976  2020.4 - 2023.3

    日本学術振興会  科学研究費補助金  基盤研究(C)

    間野吉郎(研究代表者)、中園幹生

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    Authorship:Coinvestigator(s)  Grant type:Competitive

  6. 遺伝型・表現型が支配する水稲根圏の微生物食物連鎖構造と機能

    Grant number:20H02887  2020.4 - 2023.3

    日本学術振興会  科学研究費補助金  基盤研究(B)

    村瀬 潤(研究代表者)、中園幹生、土井 一行、 西内 俊策

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    Authorship:Coinvestigator(s) 

  7. 酸素漏出バリア形成機構の解明及びトウモロコシの耐湿性向上への寄与の検証

    Grant number:18H02175  2018.4 - 2021.3

    日本学術振興会  科学研究費補助金  基盤研究(B)

    中園幹生(研究代表者)、間野吉郎、高溝 正

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\17420000 ( Direct Cost: \13400000 、 Indirect Cost:\4020000 )

  8. Understanding mechanism of formation of radial oxygen loss barrier in maize and teosinte

    Grant number:15H04434  2015.4 - 2018.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (B)

    Nakazono Mikio, Yoshiro Mano

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\16770000 ( Direct Cost: \12900000 、 Indirect Cost:\3870000 )

  9. Identification of leaf-derived signal for inducing the secondary aerenchyma formation in soybean

    Grant number:25660003  2013.4 - 2015.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research   Grant-in-Aid for Challenging Exploratory Research

    NAKAZONO Mikio

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\4030000 ( Direct Cost: \3100000 、 Indirect Cost:\930000 )

    Under waterlogged conditions, soybean forms secondary aerenchyma (SA) in the hypocotyl. In this study, I used 2 cultivars, Asoaogari and Enrei. The SA formation is 1-2 days earlier in Asoaogari than in Enrei. The grafting of the 2 cultivars showed that the SA formation-promoting factors of Asoaogari exist in the hypocotyl, but not in leaves. On the other hand, I found that the SA formation was inhibited in the darkness or CO2 deficiency even under waterlogged conditions. The SA formation was inhibited under waterlogged conditions when we cut seedlings above the epicotyl, but sucrose loading to the cut surface recovered its formation. In the heat-girdled seedling under waterlogged conditions, the SA was formed only above the heat-girdled position. Moreover, sucrose was highly accumulated in the hypocotyl under waterlogged conditions. These results suggest that sucrose transport from leaves is important for the SA formation in soybean hypocotyls under waterlogged conditions.

  10. ダイズの耐湿性強化に寄与する二次通気組織の形成機構の解明

    Grant number:12F02394  2012.4 - 2016.3

    日本学術振興会  科学研究費補助金  特別研究員奨励費

    中園幹生(受入研究者)、QI Xiaohua(JSPS外国人研究員)

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    Authorship:Principal investigator  Grant type:Competitive

    ダイズの耐湿性付与に重要な役割を果たす二次通気組織形成機構を解明することが本研究の目的である。これまでの解析により、二次通気組織形成には葉で合成された糖(スクロース)が湛水条件下で胚軸に輸送されることが重要であることを明らかにした。そのことを確認するために、明条件または暗条件で湛水処理をしたダイズの胚軸内のスクロースの蓄積量を測定した。その結果、明条件下で湛水処理をした場合にのみ、胚軸内でスクロースの蓄積量の増加が観察された。また、湛水条件下で、上胚軸を切断した幼植物体の切断面に糖を添加することによって、二次通気組織形成が観察されるかどうかを調査したところ、グルコース処理時には部分的に、スクロース処理時には非切断時と同程度まで二次通気組織形成能が回復することが明らかとなった。それに対して、ネガティブコントロールの糖として用いたマンニトールで処理した場合では二次通気組織は形成されなかった。これらの結果から、湛水条件下の二次通気組織形成には、葉で光合成によって生合成される糖(スクロース)が師部を通して胚軸に供給されることが、二次通気組織の形成に重要であることを確認できた。
    また、二次通気組織形成に関与する調節因子としてCLEペプチドが考えられているので、二次通気組織形成時に特異的に発現するCLE遺伝子を同定して、組織別の定量RT-PCRを実施した。また、人工合成したCLEペプチドを投与して、二次通気組織形成への効果を確かめた。
    今後、これらの解析を通して、糖やCLEペプチドによる二次通気組織形成の制御機構を明らかにする予定である。
    27年度が最終年度であるため、記入しない。
    27年度が最終年度であるため、記入しない。

  11. Developing agronomy best practice to optimize sustainable crop production system in flood-prone area of Asia

    Grant number:24405021  2012.4 - 2016.3

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    This study was conducted with the object of analyzing the possibility of cropping system in rice and soybean in Swamp which spreads in Indonesia. With a selection of resistant rice variety on iron toxicity and to revealed mechanisms on iron detoxification and absorption inhibition from QTL analysis. In addition, proposed to avoid failure due to flooding conditions effective fertility management practices. Furthermore we demonstrated a ratoon cropping system with high potential. To clarify the physiological mechanisms cause the salt injury in soybean, and usefulness of the salt tolerance of near-isogenic lines in revealed. On the other hand, the withering of rice in acid soils was triggered by low pH and also discussed some of the causes of the formation of sulfate acidic soils.

  12. Studies on evolution and functional differentiation of diterpene cyclase genes in rice.

    Grant number:24580155  2012.4 - 2015.3

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    Authorship:Coinvestigator(s)  Grant type:Competitive

    Cultivated rice (Oryza sativa) produces not only diterpene phytohormone gibberellins but also labdane-related diterpene phytoalexins, including momilactones, phytocassanes and oryzalexins. Our studies indicated that enzyme genes responsible for early-step biosynthesis of these diterpenoids express according to their biological roles, one is growth regulation and another is defense. Our studies also showed that momilactones and phytocassanes were accumulated in leaf blade samples of wild species Oryza rufipogon.

  13. Analysis of transporters and transcription factors controlling suberization in Casparian strip in rice

    Grant number:23380004  2011.4 - 2014.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (B)

    NAKAZONO Mikio

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\19370000 ( Direct Cost: \14900000 、 Indirect Cost:\4470000 )

    In rice, the hypodermis in the outer part of roots forms a suberized cell wall (Casparian strip and/or suberin lamellae), which inhibits the flow of water and ions. We examined if an ABC transporter RCN1 is involved in the Casparian strip and suberin lamellae formations and tried to understand the mechanism of suberization in Casparian strip and suberin lamellae by identifying transcription factors, which control expressions of suberin biosynthetic genes and suberin transporter genes. Under stagnant deoxygenated conditions, well-suberized hypodermis developed in the wild type but not in the rcn1 mutant. An apoplastic tracer, periodic acid, was blocked at the hypodermis in the wild type but not in rcn1, indicating that the apoplastic barrier in the mutant was impaired. Moreover, we identified some transcription factors, which might control the formations of Casparian strip and suberin lamellae.

  14. 作物の耐湿性強化に寄与する根への効率的な酸素供給機構の解明

    Grant number:11F01082  2011 - 2013

    日本学術振興会  科学研究費補助金  特別研究員奨励費

    中園幹生(受入研究者)、 KULICHIKHIN Konstantin(JSPS外国人研究員)

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    本研究では、イネの酸素漏出(ROL)バリアの構成成分の解明を目指した。そのために、好気条件下で生育させたイネの幼植物体をさらに嫌気還元条件で14日間処理した根を根端から1㎝毎に分離して、代謝産物を抽出した。各々の代謝産物をNMR (800MHz)解析を行ったところ、糖類、アミノ酸類などの様々な代謝物の蓄積量が、根の部位または生育条件によって異なることが明らかになった。特にリンゴ酸の蓄積パターンがROLバリアの形成パターンと非常に似ていたことから、リンゴ酸がROLバリア形成に関与する可能性が考えられた。スベリンの前駆体になる脂肪酸に関しては、GC-MS分析をした結果、ROLバリア形成条件において、極長鎖脂肪酸の蓄積量が増加していることが明らかになった。この結果から、嫌気還元処理をすることによって、イネの根では極長鎖脂肪酸の生合成が促進され、それらの極長鎖脂肪酸由来のスベリンモノマーが生成されることが示唆された。
    さらに、根の各組織より全RNAを抽出して、マイクロアレイ解析を行ったところ、リンゴ酸代謝関連遺伝子の発現に特徴があることが分かった。つまり、嫌気還元条件下においてプラスチドで働くNADP-Mclic emyme (NADP-ME)とPyruvated ehydrog㎝ase (PDH)をコードする遺伝子の発現が誘導されることが明らかになった。この結果より、細胞内の細胞質で生成されるリンゴ酸がプラスチドに輸送されて、プラスチド内でNADP-MEおよびPDHによってリンゴ酸からアセチルCoAへの変換が促進されることが示唆された。アセチルCoAは脂肪酸生合成の最初のステップの基質となる物質であるので、嫌気還元条件下ではリンゴ酸の蓄積量が増加することで、脂肪酸の生合成が促進されるという可能性が考えられた。
    これらの発見によつて、イネの根で嫌気還元条件特異的に蓄積するスベリンが生合成されるまでにどのような代謝経路を経るのかを示唆することができた。

  15. Analysis of proteins specifically produced in the tissues during aerenchyma formation in maize

    Grant number:23658008  2011 - 2012

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Challenging Exploratory Research

    NAKAZONO Mikio

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\3770000 ( Direct Cost: \2900000 、 Indirect Cost:\870000 )

    Aerenchyma enables internal aeration between shoots and roots, and its formation is therefore important for the adaptation of plants to excess water environments. I examined optimal conditions for comprehensive proteome analysis using the cortex isolated by laser microdissection (LM) from maize roots. I determined an optimal fixative for fixation of tissues. Moreover, I detected Alcohol dehydrogenase protein by western blotting using LM-isolated cortex proteins. However, I failed to obtain enough amounts of proteins that are required for comprehensive proteome analysis.

  16. 作物の耐湿性向上に関わる根の酸素漏洩バリア形成の機構解明

    Grant number:10F00095  2010 - 2011

    日本学術振興会  科学研究費補助金  特別研究員奨励費

    中園幹生(受入研究者)、KOTULA Lukasz(JSPS外国人研究員)

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    畑作物では通気組織はできるものの、Radial O_2 Loss(ROL)バリアが形成されないために、酸素の大部分が根の基部から土壌へと漏洩してしまい、根端が酸欠になることが湿害発生の原因となる。ROLバリアとは、根の基部からの酸素漏洩を防ぐバリアのことで、通気組織を介した酸素輸送過程での酸素損失を最小限に抑えて根端まで効率的に酸素を供給する役割を担っている。本研究の材料であるHordeum marinumは畑作物と異なり、通気組織のほかにROLバリアを形成できるために、根端まで効率よく酸素を運ぶことにより過湿環境に適応することができる。
    平成23年度はH.marinumのROLバリアを形成する系統のH21と形成しない系統のH90を用いて、低酸素処理を行い、ROLバリアの形成パターンを調査した。その結果、H21では顕著にROLバリアが形成されていたのに対して、H90ではROLバリアの形成はほとんど観察されなかった。また、外皮のスベリンラメラの染色を行った結果、H21ではスベリンの蓄積が観察されたのに対して、H90では観察されなかった。さらに、ガスクロマトグラフィーを用いて、H21とH90の根におけるスベリン含量の分析を行った。しかし、スベリンモノマーの組成については、スベリン染色のときほどの明確な差がH21とH90の間で見られなかった。その結果の再現性を確認するために、再度ガスクロマトグラフィー用の試料を調製したので、今後、再度スベリン分析を行う予定である。H.marinumの根の外皮付近の組織のみをレーザーマイクロダイセクションで単離後、網羅的な遺伝子発現解析を行うことになっていたが、これについては今後発展させる予定である。

  17. Mechanism and function of endocytosis in sucrose accumulation of plant cells

    Grant number:21248002  2009 - 2011

    TSUTSUMI Nobuhiro

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    Endocytosis performs a wide range of functions in animals and plants. Clathrin-coated vesicle (CCV) formation is an initial step of endocytosis, and in animal cells is largely achieved by dynamins. However, little is known of its molecular mechanisms in plant cells. To identify dynamin-related proteins (DRPs) involved in endocytic CCV formation in plant cells, we compared the behaviors of two structurally different Arabidopsis DRPs, DRP2B and DRP1A. DRP2B and DRP1A colocalized and assembled/disassembled together at the plasma membrane in Arabidopsis cells. DRP2B and DRP1A participate together in endocytic CCV formation in Arabidopsis cells despite the difference of their molecular properties.

  18. 細胞質雄性不稔系統を用いたミトコンドリアから核へのシグナル伝達機構の解明

    Grant number:08F08423  2008 - 2010

    日本学術振興会  科学研究費補助金  特別研究員奨励費

    中園幹生(受入研究者)、YANG Jing-Hua(JSPS外国人研究員)

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    研究材料として用いているBrassica junceaのCMS系統は、細胞質雄性不稔の形質の他に、雄蕊の一部が花弁のような組織に変化する形質が観察されるユニークな材料である。これまで、CMS系統と稔性のある維持系統間のミトコンドリアゲノム構造および遺伝子発現の比較解析を通して、細胞質雄性不稔を引き起こす原因遺伝子orf220を同定した。植物ミトコンドリアへの形質転換系はまだ確立されていないので、orf220遺伝子のCMSへの関与を証明するために、orf220遺伝子にミトコンドリア輸送シグナルを接続し、アグロバクテリウム法でBrassica junceaの稔性系統に導入した。その結果、形質転換体では、CMS系統と同様に雄性不稔のほか雄蕊の形態変化が観察され、orf220遺伝子がこのCMS系統の雄性不稔ミトコンドリア遺伝子であることの証明に成功した。Brassica junceaのCMS系統では雄蕊の形態変化が観察されていることから、雄蕊内の特定の組織でCMSに研異的な遺伝子発現の変化が起きていると予想されるので、さらに、このCMS系統の生殖器官形成過程でどのようなRetrograde調節がなされているかの解明を試みた。そのために、雄蕊の特定の組織を純粋に単離できるLaser Microdissection(LMD)を利用した。これらの組織に対するLMDの実験系を確立し、マイクロアレイ解析を行うために必要なRNAを単離できた。研究期間の途中でYang博士が帰国したために、現時点での本研究の成果はLMDによってRNAを単離できたところまでであるが、今後、マイクロアレイやcDNAの大規模塩基配列解析を進めることで、雄蕊内の特定の組織でCMSに特異的に発現する遺伝子の同定を目指す。

  19. Dynamics of mitochondria in the reproduction strategy of higher plants

    Grant number:18075005  2006 - 2010

    TSUTSUMI Nobuhiro

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Teaching Experience (On-campus) 3

  1. Genetics

    2020

  2. Plant Molecular Genetics

    2020

  3. Plant Breeding

    2020

 

Media Coverage 1

  1. 冠水でも成長するイネの仕組み解明 Newspaper, magazine

    毎日新聞社   毎日新聞(朝刊)  2019.10