Updated on 2025/10/10

写真a

 
HIRAOKA Haruka
 
Organization
Graduate School of Science Designated Assistant Professor
Title
Designated Assistant Professor

Degree 3

  1. Doctor (Science) ( 2020.3   Osaka University ) 

  2. Master (Science) ( 2016.3   Osaka University ) 

  3. Bachelor (Science) ( 2014.3   Osaka University ) 

 

Papers 11

  1. Cell–cell heterogeneity in phosphoenolpyruvate carboxylase biases early cell fate priming in Dictyostelium discoideum Reviewed Open Access

    Kenichi Abe, Hidenori Hashimura, Haruka Hiraoka, Shoko Fujishiro, Narufumi Kameya, Kazuteru Taoka, Satoshi Kuwana, Masashi Fukuzawa, Satoshi Sawai

    Frontiers in Cell and Developmental Biology   Vol. 12   2025.2

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  2. Intracellular Delivery of Antisense Oligonucleotides by Tri-Branched Cyclic Disulfide Units Reviewed Open Access

    Lyu, FJ; Hakariya, H; Hiraoka, H; Li, ZM; Matsubara, N; Soo, Y; Hashiya, F; Abe, N; Shu, ZM; Nakamoto, K; Kimura, Y; Abe, H

    CHEMMEDCHEM   Vol. 19 ( 20 ) page: e202400472   2024.7

  3. Development of PCR primers enabling the design of flexible sticky ends for efficient concatenation of long DNA fragments Open Access

    Nomura, K; Onda, K; Murase, H; Hashiya, F; Ono, Y; Terai, G; Oka, N; Asai, K; Suzuki, D; Takahashi, N; Hiraoka, H; Inagaki, M; Kimura, Y; Shimizu, Y; Abe, N; Abe, H

    RSC CHEMICAL BIOLOGY     2024.2

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    Publisher:RSC Chemical Biology  

    We developed chemically modified PCR primers that allow the design of flexible sticky ends by introducing a photo-cleavable group at the phosphate moiety. Nucleic acid derivatives containing o-nitrobenzyl photo-cleavable groups with a tert-butyl group at the benzyl position were stable during strong base treatment for oligonucleotide synthesis and thermal cycling in PCR reactions. PCR using primers incorporating these nucleic acid derivatives confirmed that chain extension reactions completely stopped at position 1 before and after the site of the photo-cleavable group was introduced. DNA fragments of 2 and 3 kbp, with sticky ends of 50 bases, were successfully concatenated with a high yield of 77%. A plasmid was constructed using this method. Finally, we applied this approach to construct a 48.5 kbp lambda phage DNA, which is difficult to achieve using restriction enzyme-based methods. After 7 days, we were able to confirm the generation of DNA of the desired length. Although the efficiency is yet to be improved, the chemically modified PCR primer offers potential to complement enzymatic methods and serve as a DNA concatenation technique.

    DOI: 10.1039/d3cb00212h

    Open Access

    Web of Science

    Scopus

  4. Topological capture of mRNA for silencing gene expression Reviewed Open Access

    Lyu Fangjie, Tomita Takashi, Abe Naoko, Hiraoka Haruka, Hashiya Fumitaka, Nakashima Yuko, Kajihara Shiryu, Tomoike Fumiaki, Shu Zhaoma, Onizuka Kazumitsu, Kimura Yasuaki, Abe Hiroshi

    CHEMICAL COMMUNICATIONS   Vol. 59 ( 77 ) page: 11564 - 11567   2023.9

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1039/d2cc06189a

    Open Access

    Web of Science

    Scopus

    PubMed

  5. The Effect of γ Phosphate Modified Deoxynucleotide Substrates on PCR Activity and Fidelity Reviewed Open Access

    Hashiya Fumitaka, Murase Hirotaka, Chandela Akash, Hiraoka Haruka, Inagaki Masahito, Nakashima Yuko, Abe Naoko, Nakamura Mayu, Terai Goro, Kimura Yasuaki, Ando Kaori, Oka Natsuhisa, Asai Kiyoshi, Abe Hiroshi

    CHEMBIOCHEM   Vol. 24 ( 14 ) page: e202200572   2023.6

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1002/cbic.202200572

    Web of Science

    Scopus

    PubMed

  6. Cap analogs with a hydrophobic photocleavable tag enable facile purification of fully capped mRNA with various cap structures Reviewed Open Access

    Inagaki Masahito, Abe Naoko, Li Zhenmin, Nakashima Yuko, Acharyya Susit, Ogawa Kazuya, Kawaguchi Daisuke, Hiraoka Haruka, Banno Ayaka, Meng Zheyu, Tada Mizuki, Ishida Tatsuma, Lyu Pingxue, Kokubo Kengo, Murase Hirotaka, Hashiya Fumitaka, Kimura Yasuaki, Uchida Satoshi, Abe Hiroshi

    NATURE COMMUNICATIONS   Vol. 14 ( 1 ) page: 2657   2023.5

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1038/s41467-023-38244-8

    Open Access

    Web of Science

    Scopus

    PubMed

  7. Creation of single molecular conjugates of metal-organic cages and DNA Reviewed Open Access

    Nakajo Toshinobu, Kusaka Shinpei, Hiraoka Haruka, Nomura Kohei, Matsubara Noriaki, Baba Rintaro, Yoshida Yuki, Nakamoto Kosuke, Honma Masakazu, Iguchi Hiroaki, Uchihashi Takayuki, Abe Hiroshi, Matsuda Ryotaro

    CHEMICAL COMMUNICATIONS   Vol. 59 ( 33 ) page: 4974 - 4977   2023.4

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1039/d3cc00460k

    Open Access

    Web of Science

    Scopus

    PubMed

  8. ATP levels influence cell movement during the mound phase in Dictyostelium discoideum as revealed by ATP visualization and simulation Reviewed Open Access

    Hiraoka Haruka, Wang Jiewen, Nakano Tadashi, Hirano Yasuhiro, Yamazaki Shinichi, Hiraoka Yasushi, Haraguchi Tokuko

    FEBS OPEN BIO   Vol. 12 ( 11 ) page: 2042 - 2056   2022.11

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    Authorship:Lead author, Corresponding author   Language:English  

    DOI: 10.1002/2211-5463.13480

    Open Access

    Web of Science

    Scopus

    PubMed

  9. A 2 & PRIME;-modified uridine analog, 2'-O-(methylthiomethoxy)methyl uridine, for siRNA applications Reviewed International coauthorship Open Access

    Lyu Fangjie, An Seongjin, Kobayashi Yoshiaki, Nomura Kohei, Baba Rintaro, Abe Naoko, Hiraoka Haruka, Hashiya Fumitaka, Shu Zhaoma, Ui-Tei Kumiko, Kimura Yasuaki, Abe Hiroshi

    BIOORGANIC & MEDICINAL CHEMISTRY LETTERS   Vol. 74   page: 128939   2022.10

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  10. Antisense Oligonucleotide Modified with Disulfide Units Induces Efficient Exon Skipping in <i>mdx</i> Myotubes through Enhanced Membrane Permeability and Nucleus Internalization Reviewed International coauthorship

    Hiraoka Haruka, Shu Zhaoma, Tri Le Bao, Masuda Keiko, Nakamoto Kosuke, Fangjie Lyu, Abe Naoko, Hashiya Fumitaka, Kimura Yasuaki, Shimizu Yoshihiro, Veedu Rakesh N., Abe Hiroshi

    CHEMBIOCHEM   Vol. 22 ( 24 ) page: 3437 - 3442   2021.12

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    Authorship:Lead author   Language:English  

    DOI: 10.1002/cbic.202100413

    Web of Science

    Scopus

    PubMed

  11. Intracellular ATP levels influence cell fates in <i>Dictyostelium discoideum</i> differentiation Reviewed Open Access

    Hiraoka Haruka, Nakano Tadashi, Kuwana Satoshi, Fukuzawa Masashi, Hirano Yasuhiro, Ueda Masahiro, Haraguchi Tokuko, Hiraoka Yasushi

    GENES TO CELLS   Vol. 25 ( 5 ) page: 312 - 326   2020.5

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    Authorship:Lead author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/gtc.12763

    Open Access

    Web of Science

    Scopus

    PubMed

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Books 3

  1. 核酸医薬・mRNA医薬の製造分析の基礎と基盤技術開発

    乙竹真美、平岡陽花、阿部洋( Role: Contributor ,  翻訳反応を最大化するための合成mRNAの分子設計)

    CMCリサーチ  2023.2 

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    Language:Japanese Book type:Scholarly book

  2. 総合診療コラム「mRNAワクチンの現在と未来」

    平岡 陽花

    医学書院  2023 

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    Total pages:3  

    CiNii Research

  3. 最先端ナノライフシステム研究

    平岡陽花、阿部洋( Role: Contributor ,  ジスルフィド修飾による核酸の機能向上と医薬応用)

    2022  ( ISBN:9784863455207

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    Language:Japanese Book type:Textbook, survey, introduction

Research Project for Joint Research, Competitive Funding, etc. 3

  1. がん抑制型核酸医薬開発

    2025.4 - 2028.3

    若手新分野創成研究ユニット 

    平岡陽花, 橋谷文貴

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\3000000 ( Direct Cost: \3000000 、 Indirect Cost:\3000000 )

  2. 貪食マクロファージと腸上皮細胞間の相互作用が導く寿命延伸の機構解明

    2025.4 - 2026.3

    公益財団法人 堀科学芸術振興財団  研究助成(第一部) 

    平岡陽花

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\2000000 ( Direct Cost: \2000000 )

  3. 貪食マクロファージが腸で発揮する寿命延伸機構の遺伝的基盤の解明

    2024.11 - 2026.9

    公益財団法人 住友財団  基礎科学研究助成 

    平岡陽花, 大澤志津江

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    Authorship:Principal investigator  Grant type:Competitive

    Grant amount:\4500000 ( Direct Cost: \4500000 )

KAKENHI (Grants-in-Aid for Scientific Research) 3

  1. 細胞間力の可視化による「細胞接着が駆動する細胞競合」のメカニズム解明

    Grant number:24K18111  2024.4 - 2029.3

    科学研究費助成事業  若手研究

    平岡 陽花

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    Authorship:Principal investigator 

    Grant amount:\4550000 ( Direct Cost: \3500000 、 Indirect Cost:\1050000 )

    がん抑制性のHippo経路が不活化したfat変異細胞群は、隣接する正常細胞を排除して自身の領域を拡大するスーパーコンペティションを起こし、がんの悪性化を招く。我々は、周辺の正常細胞に対して接着因子であるed遺伝子の変異を導入することで、fat変異細胞によるスーパーコンペティションが著しく促進されることを見出した。本研究課題では、ed変異がもたらす影響の理解を通じて、fat変異細胞によるスーパーコンペティションの分子機構を明らかにすることを目指す。

  2. Development of membrane-permeable oligo nucleotide and clarification of the uptake mechanism

    Grant number:21K14750  2021.4 - 2024.3

    Grants-in-Aid for Scientific Research  Grant-in-Aid for Early-Career Scientists

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    Authorship:Principal investigator 

    Grant amount:\4420000 ( Direct Cost: \3400000 、 Indirect Cost:\1020000 )

  3. Visualization of the intracellular dynamics of artificial mRNAs

    Grant number:20K22704  2020.9 - 2022.3

    Grants-in-Aid for Scientific Research  Grant-in-Aid for Research Activity Start-up

    Hiraoka Haruka

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    Authorship:Principal investigator 

    Grant amount:\2860000 ( Direct Cost: \2200000 、 Indirect Cost:\660000 )

    In this research theme, I tried to develop the RNA imaging method using fluorescence nucleic acid probe. The nucleic acid probe used for bacteria in previous research could not be used in human cells as such short oligonucleotide easily permeated into nuclei and rarely bound with target mRNA in cytosol. Therefore, instead of using the nucleic acid probe, I currently deal with the development of fluorescence mRNA composed with fluorescence nucleotides. I also achieved the intracellular delivery of the nucleic acid probe by chemical modification. Previously developed membrane-permeable oligonucleotide including 5 repeats of disulfide modification units has limited use due to their high hydrophobicity. This study reported circular disulfide group as promising modification; it enables the efficient intracellular delivery with smaller number of units.