論文 - 一柳 健司
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Birth of protein-coding exons by ancient domestication of LINE-1 retrotransposon
Kitao, K; Ichiyanagi, K; Nakagawa, S
GENOME RESEARCH 35 巻 ( 6 ) 頁： 1287 - 1300 2025年6月
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Generation and characterization of induced pluripotent stem cells of small apes
Hamazaki, Y; Akuta, H; Suzuki, H; Tanabe, H; Ichiyanagi, K; Imamura, T; Imamura, M
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY 13 巻 頁： 1536947 2025年3月
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Matsuda, S; Nakayama, M; Do, Y; Ishiuchi, T; Yagi, M; Wanrooij, S; Nakada, K; Wei, FY; Ichiyanagi, K; Sasaki, H; Kang, DC; Yasukawa, T
COMMUNICATIONS BIOLOGY 8 巻 ( 1 ) 頁： 202 2025年2月
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Insertion of short L1 sequences generates inter-strain histone acetylation differences in the mouse Open Access
Boyboy, BAG; Ichiyanagi, K
MOBILE DNA 15 巻 ( 1 ) 頁： 11 2024年5月
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Ichiyanagi, K; Ikeda, Y; Saito, K
MOBILE DNA 14 巻 ( 1 ) 頁： 22 2023年12月
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Mouse retrotransposons: sequence structure, evolutionary age, genomic distribution and function Open Access
Kawase, M; Ichiyanagi, K
GENES & GENETIC SYSTEMS 98 巻 ( 6 ) 頁： 337 - 351 2023年11月
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Uno, Y; Matsubara, K; Inoue, J; Inazawa, J; Shinohara, A; Koshimoto, C; Ichiyanagi, K; Matsuda, Y
CYTOGENETIC AND GENOME RESEARCH 163 巻 ( 1-2 ) 頁： 42 - 51 2023年11月
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C3H/HeNSlc mouse with low phospholipid transfer protein expression showed dyslipidemia. Open Access
Kobayashi M, Kanbe F, Ishii R, Tsubouchi H, Hirai K, Miyasaka Y, Ohno T, Oda H, Ikeda S, Katoh H, Ichiyanagi K, Ishikawa A, Murai A, Horio F
Scientific reports 13 巻 ( 1 ) 頁： 13813 2023年8月
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Sequence Divergence and Retrotransposon Insertion Underlie Interspecific Epigenetic Differences in Primates Open Access
Hirata, M; Ichiyanagi, T; Katoh, H; Hashimoto, T; Suzuki, H; Nitta, H; Kawase, M; Nakai, R; Imamura, M; Ichiyanagi, K
MOLECULAR BIOLOGY AND EVOLUTION 39 巻 ( 10 ) 2022年10月
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The Expression Dynamics of piRNAs Derived From Male Germline piRNA Clusters and Retrotransposons Open Access
Kawase, M; Ichiyanagi, K
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY 10 巻 頁： 868746 2022年5月
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Fukuda, K; Makino, Y; Kaneko, S; Shimura, C; Okada, Y; Ichiyanagi, K; Shinkai, Y
ELIFE 11 巻 2022年3月
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The regulatory mechanisms that make mature sperm cells in the mouse Open Access
Ichiyanagi, K
GENES & GENETIC SYSTEMS 97 巻 ( 1 ) 頁： 1 - 1 2022年2月
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Ichiyanagi, K; Saito, K
MOBILE DNA 13 巻 ( 1 ) 頁： 3 2022年1月
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TFB2M and POLRMT are essential for mammalian mitochondrial DNA replication Open Access
Inatomi, T; Matsuda, S; Ishiuchi, T; Do, Y; Nakayama, M; Abe, S; Kasho, K; Wanrooij, S; Nakada, K; Ichiyanagi, K; Sasaki, H; Yasukawa, T; Kang, D
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 1869 巻 ( 1 ) 頁： 119167 2022年1月
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Park, H; Tanoue, M; Sugimoto, A; Ichiyanagi, K; Iwahana, G; Hiyama, T
JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES 126 巻 ( 12 ) 2021年12月
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melRNA-seq for Expression Analysis of SINE RNAs and Other Medium-Length Non-Coding RNAs Open Access
Mori, Y; Ichiyanagi, K
MOBILE DNA 12 巻 ( 1 ) 頁： 15 2021年6月
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B2 SINE Copies Serve as a Transposable Boundary of DNA Methylation and histone Modifications in the Mouse Open Access
Ichiyanagi, T; Katoh, H; Mori, Y; Hirafuku, K; Boyboy, BA; Kawase, M; Ichiyanagi, K
MOLECULAR BIOLOGY AND EVOLUTION 38 巻 ( 6 ) 頁： 2380 - 2395 2021年6月
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Dispersal history of <i>Miniopterus fuliginosus</i> bats and their associated viruses in east Asia Open Access
Kimprasit, T; Nunome, M; Iida, K; Murakami, Y; Wong, ML; Wu, CH; Kobayashi, R; Hengjan, Y; Takemae, H; Yonemitsu, K; Kuwata, R; Shimoda, H; Si, LF; Sohn, JH; Asakawa, S; Ichiyanagi, K; Maeda, K; Oh, HS; Mizutani, T; Kimura, J; Iida, A; Hondo, E
PLOS ONE 16 巻 ( 1 ) 頁： e0244006 2021年1月
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Kinoshita, K; Suzuki, T; Koike, M; Nishida, C; Koike, A; Nunome, M; Uemura, T; Ichiyanagi, K; Matsuda, Y
COMMUNICATIONS BIOLOGY 3 巻 ( 1 ) 頁： 144 2020年3月
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Hiramoto, T; Tahara, M; Liao, JY; Soda, Y; Miura, Y; Kurita, R; Hamana, H; Inoue, K; Kohara, H; Miyamoto, S; Hijikata, Y; Okano, S; Yamaguchi, Y; Oda, Y; Ichiyanagi, K; Toh, H; Sasaki, H; Kishi, H; Ryo, A; Muraguchi, A; Takeda, M; Tani, K
MOLECULAR THERAPY 28 巻 ( 1 ) 頁： 129 - 141 2020年1月
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Characterization of genetic-origin-dependent monoallelic expression in mouse embryonic stem cells Open Access
Ohishi, H; Yeung, WKA; Unoki, M; Ichiyanagi, K; Fukuda, K; Maenohara, S; Shirane, K; Chiba, H; Sado, T; Sasaki, H
GENES TO CELLS 25 巻 ( 1 ) 頁： 54 - 64 2020年1月
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Hada, M; Miyata, K; Ohmura, S; Arashida, Y; Ichiyanagi, K; Katayama, I; Suzuki, T; Chen, W; Mizote, S; Sawa, T; Yokoya, T; Seki, T; Matsuo, J; Tokunaga, T; Itoh, C; Tsuruta, K; Fukaya, R; Nozawa, S; Adachi, S; Takeda, J; Onda, K; Koshihara, S; Hayashi, Y; Nishina, Y
ACS NANO 13 巻 ( 9 ) 頁： 10103 - 10112 2019年9月
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Inoguchi, Y; Ichiyanagi, K; Ohishi, H; Maeda, Y; Sonoda, N; Ogawa, Y; Inoguchi, T; Sasaki, H
SCIENTIFIC REPORTS 9 巻 ( 1 ) 頁： 10181 2019年7月
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Novel roles of <i>Drosophila</i> FUS and Aub responsible for piRNA biogenesis in neuronal disorders
Wakisaka, KT; Tanaka, R; Hirashima, T; Muraoka, Y; Azuma, Y; Yoshida, H; Tokuda, T; Asada, S; Suda, K; Ichiyanagi, K; Ohno, S; Itoh, M; Yamaguchi, M
BRAIN RESEARCH 1708 巻 頁： 207 - 219 2019年4月
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TE studies in Japan: the fourth Japanese meeting on host-transposon interactions Open Access
Ichiyanagi, K; Saito, K
MOBILE DNA 10 巻 頁： 11 2019年3月
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Accurate estimation of 5-methylcytosine in mammalian mitochondrial DNA Open Access
Matsuda, S; Yasukawa, T; Sakaguchi, Y; Ichiyanagi, K; Unoki, M; Gotoh, K; Fukuda, K; Sasaki, H; Suzuki, T; Kang, D
SCIENTIFIC REPORTS 8 巻 ( 1 ) 頁： 5801 2018年4月
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Kuroki, S; Nakai, Y; Maeda, R; Okashita, N; Akiyoshi, M; Yamaguchi, Y; Kitano, S; Miyachi, H; Nakato, R; Ichiyanagi, K; Shirahige, K; Kimura, H; Shinkai, Y; Tachibana, M
STEM CELL REPORTS 10 巻 ( 4 ) 頁： 1340 - 1354 2018年4月
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Wakisaka, KT; Ichiyanagi, K; Ohno, S; Itoh, M
MOBILE DNA 9 巻 頁： 7 2018年2月
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Shimosuga, K; Fukuda, K; Sasaki, H; Ichiyanagi, K
MOBILE DNA 8 巻 頁： 20 2017年12月
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Locus-specific hypomethylation of the mouse IAP retrotransposon is associated with transcription factor-binding sites. 査読有り Open Access
Shimosuga KI, Fukuda K, Sasaki H, Ichiyanagi K.
MOBILE DNA 8 巻 頁： 20 2017年12月
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Diversity of P-element piRNA production among M' and Q strains and its association with P-M hybrid dysgenesis in Drosophila melanogaster. 査読有り Open Access
Wakisaka KT, Ichiyanagi K, Ohno S, Itoh M
MOBILE DNA 8 巻 頁： 13 2017年10月
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Wakisaka, KT; Ichiyanagi, K; Ohno, S; Itoh, M
MOBILE DNA 8 巻 頁： 13 2017年10月
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Evolution of the sperm methylome of primates is associated with retrotransposon insertions and genome instability 査読有り Open Access
Fukuda, K; Inoguchi, Y; Ichiyanagi, K; Ichiyanagi, T; Go, Y; Nagano, M; Yanagawa, Y; Takaesu, N; Ohkawa, Y; Imai, H; Sasaki, H
HUMAN MOLECULAR GENETICS 26 巻 ( 18 ) 頁： 3508 - 3519 2017年9月
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Inoue, K; Ichiyanagi, K; Fukuda, K; Glinka, M; Sasaki, H
PLOS GENETICS 13 巻 ( 7 ) 頁： e1006926 2017年7月
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The genetic diversity of D-loop sequences in eastern bent-winged bats (<i>Miniopterus fuliginosus</i>) living in Wakayama Prefecture, Japan 査読有り Open Access
Iida, K; Kobayashi, R; Hengjan, Y; Nagata, N; Yonemitsu, K; Nunome, M; Kuwata, R; Suzuki, K; Ichiyanagi, K; Maeda, K; Ohmori, Y; Hondo, E
JOURNAL OF VETERINARY MEDICAL SCIENCE 79 巻 ( 6 ) 頁： 1142 - 1145 2017年6月
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Iron-heme-Bach1 axis is involved in erythroblast adaptation to iron deficiency 査読有り Open Access
Kobayashi, M; Kato, H; Hada, H; Itoh-Nakadai, A; Fujiwara, T; Muto, A; Inoguchi, Y; Ichiyanagi, K; Hojo, W; Tomosugi, N; Sasaki, H; Harigae, H; Igarashi, K
HAEMATOLOGICA 102 巻 ( 3 ) 頁： 454 - 465 2017年3月
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Software updates in the Illumina HiSeq platform affect whole-genome bisulfite sequencing. 査読有り Open Access
Toh H, Shirane K, Miura F, Kubo N, Ichiyanagi K, Hayashi K, Saitou M, Suyama M, Ito T, Sasaki H
BMC genomics 18 巻 ( 1 ) 頁： 31 2017年1月
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Chd5 regulates MuERV-L/MERVL expression in mouse embryonic stem cells via H3K27me3 modification and histone H3.1/H3.2. 査読有り
117 巻 頁： 780-792 2016年
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TE studies in Japan: The third Japanese meeting on host-transposon interactions. Open Access
7 巻 2016年
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Regulating Pol III transcription to change Pol II transcriptome. 招待有り Open Access
13 巻 頁： 3625-3626 2014年
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HSP90α plays an important role in piRNA biogenesis and retrotransposon repression in mouse. 査読有り Open Access
Ichiyanagi T., Ichiyanagi K., Ogawa A., Kuramochi-Miyagawa S., Nakano T., Chuma S., Sasaki H., and Udono H.
Nucleic Acids Res 42 巻 頁： 11903-11911 2014年
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Transposable elements in eukaryotic genomes: epigenetic regulation by the host and functionalization for the host. 査読有り
Ichiyanagi K.
Genes Genet Syst 88 巻 頁： 1 2013年
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Three novel ZBTB24 mutations identified in Japanese and Cape Verdean type 2 ICF syndrome patients. 査読有り Open Access
Nitta H., Unoki M., Ichiyanagi K., Kosho T., Shigemura T., Takahashi H., Velasco G., Francastel C., Picard C., Kubota T., and Sasaki H.
J Hum Genet ( 58 ) 頁： 455-460 2013年
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Targeted gene silencing in mouse germ cells by insertion of a homologous DNA into a piRNA generating locus. 査読有り Open Access
Yamamoto Y., Watanabe T., Hoki Y., Shirane K., Li Y., Ichiyanagi K., Kuramochi- Miyagawa S., Toyoda A., Fujiyama A., Oginuma M., Suzuki H., Sado T., Nakano T., and Sasaki, H.
Genome Res 23 巻 頁： 292-299 2013年
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Identification of both copy number variation-type and constant-type core elements in a large segmental duplication region of the mouse genome. 査読有り Open Access
Umemori J., Mori A., Ichiyanagi K., Uno T., and Koide T.
BMC Genomics 14 巻 頁： 455 2013年
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DNA methylation differences between humans and chimpanzees are associated with genetic changes, transcriptional divergence and disease genes. 査読有り
Fukuda K., Ichiyanagi K.*, Yamada Y., Go Y., Udono T., Wada S., Maeda M., Soejima H., Saitou N., Ito T., and Sasaki H.
J Hum Genet 58 巻 頁： 446-454 2013年
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Accumulation and loss of non-CpG methylation during male germ-cell development. 査読有り
Ichiyanagi T., Ichiyanagi K., Miyake M., and Sasaki H.
Nucleic Acids Res 41 巻 頁： 738-745 2013年
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Epigenetic regulation of transcription and possible functions of mammalian short interspersed elements, SINEs. 査読有り Open Access
88 巻 頁： 19-29 2013年
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Inhibition of MspI cleavage activity by hydroxymethylation of the CpG site: A concern for DNA modification studies using restriction endonucleases. 査読有り
Ichiyanagi K.
Epigenetics 7 巻 頁： 131-136 2012年
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Locus- and domain-dependent control of DNA methylation at mouse B1 retrotransposons during male germ cell development. 査読有り Open Access
Ichiyanagi K.*, Li Y., Watanabe T., Ichiyanagi T., Fukuda K., Kitayama J., Yamamoto Y., Kuramochi-Miyagawa S., Nakano T., Yabuta Y., Seki Y., Saitou M., and Sasaki H.
Genome Res 21 巻 頁： 2058-2066 2011年
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Role for piRNAs and non-coding RNA in de novo DNA methylation of the imprinted mouse Rasgrf1 locus. 査読有り
Watanabe T., Tomizawa S., Mitsuya K., Totoki Y., Yamamoto Y., Kuramochi-Miyagawa S., Iida N., Hoki Y., Murphy P.J., Toyoda A., Gotoh K., Hiura H., Arima T., Fujiyama A., Sado T., Shibata T., Nakano T., Lin H., Ichiyanagi K., Soloway P. D., and Sasaki H.
Science 332 巻 頁： 848-852 2011年