論文 - 松井 佑介
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D3M:Detection of differential distributions of methylation levels. 招待有り 査読有り
Yusuke Matsui, Masahiro Mizuta, Satoshi Ito , Satoru Miyano, Teppei Shimamura
Bioinformatics 32 巻 ( 15 ) 頁: 2248 - 2255 2016年8月
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Akihiro Kitani, Yusuke Matsui
2024年8月
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HuTAge: a Comprehensive Human Tissue- and Cell-specific Ageing Signature Atlas
Koichi Himori, Zhang Bingyuan, Kazuki Hatta, Yusuke Matsui
2024年8月
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Toward a systems glycogenomics approach to understanding diseases 招待有り
松井佑介
Glycoforum 27 巻 ( 4 ) 頁: A12 2024年8月
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A Computational Approach to Interpreting the Embedding Space of Dimension Reduction
Bingyuan Zhang, Kohei Uno, Hayata Kodama, Koichi Himori, Yusuke Matsui
2024年6月
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GPNMB+ microglia moderate the amyloid beta-tau interaction in early Alzheimer’s disease
Akihiro Kitani, Yusuke Matsui
2024年6月
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Kohei Uno, Kako Tsukioka, Hibiki Sakata, Tomoe Inoue-Hirakawa, Yusuke Matsui
Healthcare 12 巻 ( 9 ) 頁: 931 - 931 2024年5月
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Systematic identification of exercise-induced anti-aging processes involving intron retention
Hayata Kodama, Hirotaka Ijima, Yusuke Matsui
2024年4月
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BRAFV600E Promotes Anchorage-Independent Growth but Inhibits Anchorage-Dependent Growth in hTERT / Cdk4-Immortalized Normal Human Bronchial Epithelial Cells
Nao Muraki, Nozomi Kawabe, Ayano Ohashi, Kanna Umeda, Masahito Katsuda, Aya Tomatsu, Mikina Yoshida, Kazuki Komeda, John D. Minna, Ichidai Tanaka, Masahiro Morise, Miyoko Matsushima, Yusuke Matsui, Tsutomu Kawabe, Mitsuo Sato
Experimental Cell Research 頁: 114057 - 114057 2024年4月
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Network-based cytokine inference implicates Oncostatin M as a driver of an inflammation phenotype in knee osteoarthritis 招待有り 査読有り 国際共著
Iijima H, Zhang F, Ambrosio F, Matsui Y.
Aging Cell 頁: e14043 2024年2月
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Yusuke Matsui, Akira Togayachi, Kazuma Sakamoto, Kiyohiko Angata, Kenji Kadomatsu, Shoko Nishihara
2023年12月
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Network-based systematic dissection of exercise-induced inhibition of myosteatosis in older individuals. 査読有り 国際共著
Iijima H, Ambrosio F, Matsui Y.
J Physiol. 2023年12月
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Unbiased estimation of the population-level motor module
Yusuke Matsui, Kohei Uno, Ippei Nojima
2023年6月
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Pgc-1α is an exercise-responsive regulator of myosteatosis in older individuals
Hirotaka Iijima, Fabrisia Ambrosio, Yusuke Matsui
2023年2月
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Hirotaka Iijima, Fan Zhang, Fabrisia Ambrosio, Yusuke Matsui
2023年1月
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Types of anomalies in two-dimensional video-based gait analysis in uncontrolled environments 招待有り 査読有り
Yuki Sugiyama ,Kohei Uno ,Yusuke Matsui
PLoS Computational Biology 2023年1月
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理学療法におけるデータサイエンスとAIの利活用と課題 理学療法の教育分野におけるデータサイエンスとAIの利活用と課題 招待有り 査読有り
松井佑介
理学療法 2022年4月
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Meta-analysis integrated with multi-omics data analysis to elucidate pathogenic mechanisms of age-related knee osteoarthritis in mice 査読有り 国際共著
Hirotaka Iijima, Gabrielle Gilmer, Kai Wang, Sruthi Sivakumar, Christopher Evans, Yusuke Matsui, Fabrisia Ambrosio
The journals of gerontology. Series A, Biological sciences and medical sciences 2022年3月
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Pan-cancer methylome analysis for cancer diagnosis and classification of cancer cell of origin. 招待有り 査読有り
Dai Shimizu, Kenzui Taniue, Yusuke Matsui, Hiroshi Haeno, Hiromitsu Araki, Fumihito Miura, Mitsuko Fukunaga, Kenji Shiraishi, Yuji Miyamoto, Seiichi Tsukamoto, Aya Komine, Yuta Kobayashi, Akihiro Kitagawa, Yukihiro Yoshikawa, Kuniaki Sato, Tomoko Saito, Shuhei Ito, Takaaki Masuda, Atsushi Niida, Makoto Suzuki, Hideo Baba, Takashi Ito, Nobuyoshi Akimitsu, Yasuhiro Kodera, Koshi Mimori
Cancer gene therapy 2021年11月
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Increased BUB1B/BUBR1 expression contributes to aberrant DNA repair activity leading to resistance to DNA-damaging agents. 招待有り 査読有り
Kazumasa Komura, Teruo Inamoto, Takuya Tsujino, Yusuke Matsui, Tsuyoshi Konuma, Kazuki Nishimura, Taizo Uchimoto, Takeshi Tsutsumi, Tomohisa Matsunaga, Ryoichi Maenosono, Yuki Yoshikawa, Kohei Taniguchi, Tomohito Tanaka, Hirofumi Uehara, Koichi Hirata, Hajime Hirano, Hayahito Nomi, Yoshinobu Hirose, Fumihito Ono, Haruhito Azuma
Oncogene 2021年9月
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RoDiCE: robust differential protein co-expression analysis for cancer complexome. 招待有り 査読有り
Yusuke Matsui, Yuichi Abe, Kohei Uno, Satoru Miyano
Bioinformatics 2021年9月
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Pre-stimulus alpha oscillation and post-stimulus cortical activity differ in localization between consciously perceived and missed near-threshold somatosensory stimuli. 招待有り 査読有り
Jun-Ichi Uemura, Aiko Hoshino, Go Igarashi, Yusuke Matsui, Makoto Chishima, Minoru Hoshiyama
The European journal of neuroscience 2021年8月
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An in vitro coculture system of human peripheral blood mononuclear cells with hepatocellular carcinoma-derived cells for predicting drug-induced liver injury
Oda Shingo, Uchida Yuka, Aleo Michael D., Koza-Taylor Petra H., Matsui Yusuke, Hizue Masanori, Marroquin Lisa D., Whritenour Jessica, Uchida Eri, Yokoi Tsuyoshi
ARCHIVES OF TOXICOLOGY 95 巻 ( 1 ) 頁: 149 - 168 2021年1月
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EXOSC9 depletion attenuates P-body formation, stress resistance, and tumorigenicity of cancer cells
Yoshino Seiko, Matsui Yusuke, Fukui Yuya, Seki Masahide, Yamaguchi Kiyoshi, Kanamori Akane, Saitoh Yurika, Shimamura Teppei, Suzuki Yutaka, Furukawa Yoichi, Kaneko Shuichi, Seiki Motoharu, Murakami Yoshinori, Inoue Jun-ichiro, Sakamoto Takeharu
SCIENTIFIC REPORTS 10 巻 ( 1 ) 頁: 9275 2020年6月
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Coordinated demethylation of H3K9 and H3K27 is required for rapid inflammatory responses of endothelial cells
Higashijima Yoshiki, Matsui Yusuke, Shimamura Teppei, Nakaki Ryo, Nagai Nao, Tsutsumi Shuichi, Abe Yohei, Link Verena M., Osaka Mizuko, Yoshida Masayuki, Watanabe Ryo, Tanaka Toshihiro, Taguchi Akashi, Miura Mai, Ruan Xiaoan, Li Guoliang, Inoue Tsuyoshi, Nangaku Masaomi, Kimura Hiroshi, Furukawa Tetsushi, Aburatani Hiroyuki, Wada Youichiro, Ruan Yijun, Glass Christopher K., Kanki Yasuharu
EMBO JOURNAL 39 巻 ( 7 ) 頁: e103949 2020年4月
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A network of networks approach for modeling interconnected brain tissue-specific networks
Kawakubo Hideko, Matsui Yusuke, Kushima Itaru, Ozaki Norio, Shimamura Teppei
BIOINFORMATICS 35 巻 ( 17 ) 頁: 3092 - 3101 2019年9月
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Pathogenic Epigenetic Consequences of Genetic Alterations in IDH-wild-type Diffuse Astrocytic Gliomas.
Cancer research 2019年8月
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GIMLET: Identifying Biological Modulators in Context-Specific Gene Regulation Using Local Energy Statistics 査読有り
T SHIMAMURA, Y MATSUI, S MIYANO
Lecture Notes in Computer Science 10834 巻 頁: 124-137 2019年2月
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Tumor subclonal progression model for cancer hallmark acquisition 査読有り
Y MATSUI, S MIYANO, T SHIMAMURA
Lecture Notes in Computer Science 10834 巻 頁: 115-123 2019年2月
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A temporal shift of the evolutionary principle shaping intratumor heterogeneity in colorectal cancer
Saito Tomoko, Niida Atsushi, Uchi Ryutaro, Hirata Hidenari, Komatsu Hisateru, Sakimura Shotaro, Hayashi Shuto, Nambara Sho, Kuroda Yosuke, Ito Shuhei, Eguchi Hidetoshi, Masuda Takaaki, Sugimachi Keishi, Tobo Taro, Nishida Haruto, Daa Tsutomu, Chiba Kenichi, Shiraishi Yuichi, Yoshizato Tetsuichi, Kodama Masaaki, Okimoto Tadayoshi, Mizukami Kazuhiro, Ogawa Ryo, Okamoto Kazuhisa, Shuto Mitsutaka, Fukuda Kensuke, Matsui Yusuke, Shimamura Teppei, Hasegawa Takanori, Doki Yuichiro, Nagayama Satoshi, Yamada Kazutaka, Kato Mamoru, Shibata Tatsuhiro, Mori Masaki, Aburatani Hiroyuki, Murakami Kazunari, Suzuki Yutaka, Ogawa Seishi, Miyano Satoru, Mimori Koshi
NATURE COMMUNICATIONS 9 巻 ( 1 ) 頁: 2884 2018年7月
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ER Stress Signaling Promotes the Survival of Cancer "Persister Cells" Tolerant to EGFR Tyrosine Kinase Inhibitors
Terai Hideki, Kitajima Shunsuke, Potter Danielle S., Matsui Yusuke, Quiceno Laura Gutierrez, Chen Ting, Kim Tae-jung, Rusan Maria, Thai Tran C., Piccioni Federica, Donovan Katherine A., Kwiatkowski Nicholas, Hinohara Kunihiko, Wei Guo, Gray Nathanael S., Fischer Eric S., Wong Kwok-Kin, Shimamura Teppei, Letai Anthony, Hammerman Peter S., Barbie David A.
CANCER RESEARCH 78 巻 ( 4 ) 頁: 1044-1057 2018年2月
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Identification of Cardiomyocyte-Fated Progenitors from Human-Induced Pluripotent Stem Cells Marked with CD82
Takeda Masafumi, Kanki Yasuharu, Masumoto Hidetoshi, Funakoshi Shunsuke, Hatani Takeshi, Fukushima Hiroyuki, Izumi-Taguchi Akashi, Matsui Yusuke, Shimamura Teppei, Yoshida Yoshinori, Yamashita Jun K.
CELL REPORTS 22 巻 ( 2 ) 頁: 546-556 2018年1月
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phyC: Clustering cancer evolutionary trees
Matsui Yusuke, Niida Atsushi, Uchi Ryutaro, Mimori Koshi, Miyano Satoru, Shimamura Teppei
PLOS COMPUTATIONAL BIOLOGY 13 巻 ( 5 ) 頁: e1005509 2017年5月
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NECAB3 Promotes Activation of Hypoxia-inducible factor-1 during Normoxia and Enhances Tumourigenicity of Cancer Cells 査読有り
Hiroki J. Nakaoka, Toshiro Hara, Seiko Yoshino, Akane Kanamori, Yusuke Matsui, Teppei Shimamura, Hiroshi Sato, Yoshinori Murakami, Motoharu Seiki, Takeharu Sakamoto
SCIENTIFIC REPORTS 6 巻 頁: 22784 2016年3月
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Classification of customers and analysis of purchase tendency in a group-buying coupon site. 招待有り 査読有り
Igarashi S, Matsui Y, Minami M, Mizuta M
J Soc Comp Stat 28 巻 ( 2 ) 頁: 1 - 8 2015年
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Comparison of Two Distribution Valued Dissimilarities and Its Application for Symbolic Clustering 査読有り
Matsui Y, Komiya Y, Minami H and Mizuta M.
Studies in Classification, Data Analysis, and Knowledge Organization 頁: 673-680 2014年10月
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SDA for mixed-type data and its application to analysis of environmental radio activity level data. 査読有り
Matsui Y,Mizuta M.
COMPSTAT2014 頁: 673-680 2014年8月
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Symbolic Cluster Analysis for Distribution Valued Dissimilarity 査読有り
Matsui Y, Minami H and Mizuta, M.
Communications for Statistical Applications and Methods. 21 巻 ( 3 ) 頁: 225-234 2014年5月