Papers - HIROAKI Hidekazu
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Structure and Function of the N-terminal Nucleolin Binding Domain of Nuclear Valosin-containing Protein-like 2 (NVL2) Harboring a Nucleolar Localization Signal. Reviewed
Fujiwara, Y., Fujiwara, K., Goda, N., Iwaya, N., Tenno, T., Shirakawa, M., and Hiroaki, H.
J Biol Chem. Vol. 286 ( 24 ) page： 21732-21741. 2011.6
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(1)H, (13)C, and (15)N resonance assignment of the SPFH domain of human stomatin. Reviewed
Tsuruta, T., Goda, N., Umetsu, Y., Iwaya, N., Kuwahara, Y., and Hiroaki, H.
Biomol NMR Assign. Vol. 6 ( 1 ) page： 23-25. 2011.6
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SH3YL1 regulates dorsal ruffle formation by a novel phosphoinositide-binding domain. Reviewed
Hasegawa, J., Tokuda, E., Tenno, T., Tsujita, K., Sawai, H., Hiroaki, H., Takenawa, T., and Itoh, T.
J Cell Biol. Vol. 193 ( 5 ) page： 901-916. 2011.5
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Structural difference of vasoactive intestinal peptide in two distinct membrane-mimicking environments. Reviewed
Umetsu, Y., Tenno, T., Goda, N., Shirakawa, M., Ikegami, T., and Hiroaki, H.
Biochim Biophys Acta. Vol. 1814 ( 5 ) page： 724-730. 2011.5
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(1)H, (13)C, and (15)N resonance assignment of the first PDZ domain of mouse ZO-1. Reviewed
Umetsu, Y., Goda, N., Taniguchi, R., Satomura, K., Ikegami, T., Furuse, M., and Hiroaki, H.
Biomol NMR Assign. Vol. 5 ( 2 ) page： 207-210. 2011.3
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SAHG, a comprehensive database of predicted structures of all human proteins. Reviewed
Motono, C., Nakata, J., Koike, R., Shimizu, K., Shirota, M., Amemiya, T., Tomii, K., Nagano, N., Sakaya, N., Misoo, K., Sato, M., Kidera, A., Hiroaki, H., Shirai, T., Kinoshita, K., Noguchi, T., and Ota, M.
Nucleic Acids Res. Vol. 39 page： D487-493. 2011.1
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Crystal structure of a PFU-PUL domain pair of Saccharomyces cerevisiae Doa1/Ufd3. Reviewed
Nishimasu, R., Komori, H., Higuchi, Y., Nishimasu, H., and Hiroaki, H.
Kobe J Med Sci. Vol. 56 ( 3 ) page： E125-139. 2010.10
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1H, 13C, and 15N resonance assignment of the TIR domain of human MyD88. Reviewed
Ohnishi, H., Tochio, H., Kato, Z., Kimura, T., Hiroaki, H., Kondo, N., and Shirakawa, M.
Biomol NMR Assign. Vol. 4 ( 2 ) page： 123-125. 2010.10
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A common substrate recognition mode conserved between katanin p60 and VPS4 governs microtubule severing and membrane skeleton reorganization. Reviewed
Iwaya, N., Kuwahara, Y., Fujiwara, Y., Goda, N., Tenno, T., Akiyama, K., Mase, S., Tochio, H., Ikegami, T., Shirakawa, M., and Hiroaki, H.
J Biol Chem. Vol. 285 ( 22 ) page： 16822-16829. 2010.5
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Structure and mutagenesis studies of the C-terminal region of licensing factor Cdt1 enable the identification of key residues for binding to replicative helicase Mcm proteins. Reviewed
Jee, J., Mizuno, T., Kamada, K., Tochio, H., Chiba, Y., Yanagi, K., Yasuda, G., Hiroaki, H., Hanaoka, F., and Shirakawa, M.
J Biol Chem. Vol. 285 ( 21 ) page： 15931-15940. 2010.5
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Unusual thermal disassembly of the SPFH domain oligomer from Pyrococcus horikoshii. Reviewed
Kuwahara, Y., Unzai, S., Nagata, T., Hiroaki, Y., Yokoyama, H., Matsui, I., Ikegami, T., Fujiyoshi, Y., and Hiroaki, H.
Biophys J. Vol. 97 ( 7 ) page： 2034-2043. 2009.10
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Structural basis for the multiple interactions of the MyD88 TIR domain in TLR4 signaling. Reviewed
Ohnishi, H., Tochio, H., Kato, Z., Orii, K. E., Li, A., Kimura, T., Hiroaki, H., Kondo, N., and Shirakawa, M.
Proc Natl Acad Sci U S A. Vol. 106 ( 25 ) page： 10260-10265. 2009.6
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High-resolution multi-dimensional NMR spectroscopy of proteins in human cells. Reviewed
Inomata, K., Ohno, A., Tochio, H., Isogai, S., Tenno, T., Nakase, I., Takeuchi, T., Futaki, S., Ito, Y., Hiroaki, H., and Shirakawa, M.
Nature. Vol. 458 ( 7234 ) page： 106-109. 2009.3
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The solution structure of the C-terminal domain of NfeD reveals a novel membrane-anchored OB-fold. Reviewed
Kuwahara, Y., Ohno, A., Morii, T., Yokoyama, H., Matsui, I., Tochio, H., Shirakawa, M., and Hiroaki, H.
Protein Sci. Vol. 17 ( 11 ) page： 1915-1924. 2008.11
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Intracellular protein delivery activity of peptides derived from insulin-like growth factor binding proteins 3 and 5. Reviewed
Goda, N., Tenno, T., Inomata, K., Shirakawa, M., Tanaka, T., and Hiroaki, H.
Exp Cell Res. Vol. 314 ( 13 ) page： 2352-2361. 2008.8
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DNA damage-induced ubiquitylation of RFC2 subunit of replication factor C complex. Reviewed
Tomida, J., Masuda, Y., Hiroaki, H., Ishikawa, T., Song, I., Tsurimoto, T., Tateishi, S., Shiomi, T., Kamei, Y., Kim, J., Kamiya, K., Vaziri, C., Ohmori, H., and Todo, T.
J Biol Chem. Vol. 283 ( 14 ) page： 9071-9079. 2008.4
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Kinetic and Thermodynamic Evidence for Flipping of a Methyl-CpG Binding Domain on Methylated DNA. Reviewed
Inomata, K., Ohki, I., Tochio, H., Fujiwara, K., Hiroaki, H., and Shirakawa, M.
Biochemistry. Vol. 47 ( 10 ) page： 3266-3271. 2008.3
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Fluoroscopic assessment of protein leakage during Xenopus oocytes in-cell NMR experiment by co-injected EGFP. Reviewed
Sakai, T., Tochio, H., Inomata, K., Sasaki, Y., Tenno, T., Tanaka, T., Kokubo, T., Hiroaki, H., and Shirakawa, M.
Anal Biochem. Vol. 371 ( 2 ) page： 247-249. 2007.12
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LBT/PTD dual tagged vector for purification, cellular protein delivery and visualization in living cells. Reviewed
Goda, N., Tenno, T., Inomata, K., Iwaya, N., Sasaki, Y., Shirakawa, M., and Hiroaki, H.
Biochim Biophys Acta. Vol. 1773 ( 2 ) page： 141-146. 2007.2
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Fine-tuning of protein domain boundary by minimizing potential coiled coil regions. Reviewed
Iwaya, N., Goda, N., Unzai, S., Fujiwara, K., Tanaka, T., Tomii, K., Tochio, H., Shirakawa, M., and Hiroaki, H.
J Biomol NMR. Vol. 37 ( 1 ) page： 53-63. 2007.1